EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000006031 (Gene tree)
Gene ID: 102228947
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 26371 bases
Position: chr2:3223621-3249991
Accession: 102228947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000006123	Not1	PF04054.15	4e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000006129	-	7002	XM_014472138	ENSXMAP00000006123	2333 (aa)	XP_014327624	M3ZV80

Gene Model

Click here to download ENSXMAG00000006031's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000006031	cnot1	100	89.567	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSXMAG00000006031	cnot1	100	91.670	ENSAPOG00000005042	cnot1	100	91.796	Acanthochromis_polyacanthus
ENSXMAG00000006031	cnot1	100	89.609	ENSAMEG00000017298	CNOT1	100	89.609	Ailuropoda_melanoleuca
ENSXMAG00000006031	cnot1	90	92.857	ENSACIG00000016003	cnot1	100	92.951	Amphilophus_citrinellus
ENSXMAG00000006031	cnot1	100	96.874	ENSAPEG00000022342	cnot1	100	96.874	Amphiprion_percula
ENSXMAG00000006031	cnot1	100	91.590	ENSATEG00000012892	cnot1	100	91.674	Anabas_testudineus
ENSXMAG00000006031	cnot1	100	88.516	ENSAPLG00000007162	CNOT1	100	88.810	Anas_platyrhynchos
ENSXMAG00000006031	cnot1	91	87.667	ENSACAG00000001602	CNOT1	98	87.876	Anolis_carolinensis
ENSXMAG00000006031	cnot1	100	86.586	ENSANAG00000038198	CNOT1	100	86.586	Aotus_nancymaae
ENSXMAG00000006031	cnot1	100	92.599	ENSACLG00000014234	cnot1	100	92.599	Astatotilapia_calliptera
ENSXMAG00000006031	cnot1	100	92.463	ENSAMXG00000013170	cnot1	100	92.674	Astyanax_mexicanus
ENSXMAG00000006031	cnot1	95	96.008	ENSBTAG00000020782	CNOT1	100	96.781	Bos_taurus
ENSXMAG00000006031	cnot1	79	41.227	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSXMAG00000006031	cnot1	100	89.295	ENSCJAG00000011318	CNOT1	100	92.182	Callithrix_jacchus
ENSXMAG00000006031	cnot1	100	89.150	ENSCAFG00000008426	CNOT1	100	89.150	Canis_familiaris
ENSXMAG00000006031	cnot1	100	90.664	ENSCAFG00020010156	CNOT1	100	93.587	Canis_lupus_dingo
ENSXMAG00000006031	cnot1	100	89.463	ENSCHIG00000010452	CNOT1	100	89.463	Capra_hircus
ENSXMAG00000006031	cnot1	100	89.421	ENSTSYG00000006888	CNOT1	100	89.421	Carlito_syrichta
ENSXMAG00000006031	cnot1	100	85.558	ENSCPOG00000013026	CNOT1	100	85.600	Cavia_porcellus
ENSXMAG00000006031	cnot1	100	87.783	ENSCCAG00000026333	CNOT1	100	87.783	Cebus_capucinus
ENSXMAG00000006031	cnot1	100	89.379	ENSCATG00000032625	CNOT1	100	89.379	Cercocebus_atys
ENSXMAG00000006031	cnot1	100	89.421	ENSCLAG00000006289	CNOT1	100	89.463	Chinchilla_lanigera
ENSXMAG00000006031	cnot1	100	89.379	ENSCSAG00000004731	CNOT1	100	89.379	Chlorocebus_sabaeus
ENSXMAG00000006031	cnot1	80	97.527	ENSCHOG00000009712	CNOT1	83	97.527	Choloepus_hoffmanni
ENSXMAG00000006031	cnot1	93	95.446	ENSCPBG00000026222	CNOT1	98	95.446	Chrysemys_picta_bellii
ENSXMAG00000006031	cnot1	100	58.205	ENSCING00000009149	-	100	57.956	Ciona_intestinalis
ENSXMAG00000006031	cnot1	89	62.277	ENSCSAVG00000002414	-	99	62.389	Ciona_savignyi
ENSXMAG00000006031	cnot1	100	87.662	ENSCANG00000040534	CNOT1	100	87.662	Colobus_angolensis_palliatus
ENSXMAG00000006031	cnot1	100	89.169	ENSCGRG00001016365	Cnot1	100	89.211	Cricetulus_griseus_chok1gshd
ENSXMAG00000006031	cnot1	100	89.169	ENSCGRG00000001714	Cnot1	100	89.211	Cricetulus_griseus_crigri
ENSXMAG00000006031	cnot1	97	100.000	ENSCVAG00000018930	cnot1	100	100.000	Cyprinodon_variegatus
ENSXMAG00000006031	cnot1	100	91.817	ENSDARG00000004174	cnot1	100	91.474	Danio_rerio
ENSXMAG00000006031	cnot1	100	87.201	ENSDNOG00000013250	CNOT1	100	87.159	Dasypus_novemcinctus
ENSXMAG00000006031	cnot1	99	46.145	FBgn0085436	Not1	96	53.085	Drosophila_melanogaster
ENSXMAG00000006031	cnot1	84	94.127	ENSETEG00000012806	CNOT1	84	94.127	Echinops_telfairi
ENSXMAG00000006031	cnot1	81	75.893	ENSEBUG00000011534	cnot1	95	75.893	Eptatretus_burgeri
ENSXMAG00000006031	cnot1	95	96.008	ENSEASG00005005819	CNOT1	100	96.781	Equus_asinus_asinus
ENSXMAG00000006031	cnot1	100	89.379	ENSECAG00000009889	CNOT1	100	89.379	Equus_caballus
ENSXMAG00000006031	cnot1	89	88.850	ENSEEUG00000006015	CNOT1	90	88.850	Erinaceus_europaeus
ENSXMAG00000006031	cnot1	100	93.871	ENSELUG00000014085	cnot1	100	93.571	Esox_lucius
ENSXMAG00000006031	cnot1	100	89.159	ENSFCAG00000025155	CNOT1	100	89.159	Felis_catus
ENSXMAG00000006031	cnot1	100	89.043	ENSFALG00000007285	CNOT1	100	89.043	Ficedula_albicollis
ENSXMAG00000006031	cnot1	100	89.379	ENSFDAG00000013399	CNOT1	100	89.421	Fukomys_damarensis
ENSXMAG00000006031	cnot1	100	96.301	ENSFHEG00000020574	cnot1	100	96.259	Fundulus_heteroclitus
ENSXMAG00000006031	cnot1	90	92.022	ENSGMOG00000012864	cnot1	100	91.976	Gadus_morhua
ENSXMAG00000006031	cnot1	100	88.917	ENSGALG00000002301	CNOT1	100	88.917	Gallus_gallus
ENSXMAG00000006031	cnot1	100	99.700	ENSGAFG00000015005	cnot1	100	99.700	Gambusia_affinis
ENSXMAG00000006031	cnot1	90	93.278	ENSGACG00000002606	cnot1	100	98.061	Gasterosteus_aculeatus
ENSXMAG00000006031	cnot1	100	89.127	ENSGAGG00000022646	CNOT1	100	91.470	Gopherus_agassizii
ENSXMAG00000006031	cnot1	100	89.421	ENSGGOG00000009547	CNOT1	100	89.421	Gorilla_gorilla
ENSXMAG00000006031	cnot1	100	92.683	ENSHBUG00000001729	cnot1	100	92.683	Haplochromis_burtoni
ENSXMAG00000006031	cnot1	100	89.295	ENSHGLG00000014322	CNOT1	100	89.337	Heterocephalus_glaber_female
ENSXMAG00000006031	cnot1	100	92.785	ENSHCOG00000006501	cnot1	100	92.701	Hippocampus_comes
ENSXMAG00000006031	cnot1	100	93.504	ENSIPUG00000011915	cnot1	100	93.504	Ictalurus_punctatus
ENSXMAG00000006031	cnot1	100	89.337	ENSSTOG00000005490	CNOT1	100	89.337	Ictidomys_tridecemlineatus
ENSXMAG00000006031	cnot1	100	88.833	ENSJJAG00000000633	Cnot1	100	88.875	Jaculus_jaculus
ENSXMAG00000006031	cnot1	100	95.006	ENSKMAG00000006149	cnot1	100	95.006	Kryptolebias_marmoratus
ENSXMAG00000006031	cnot1	95	98.204	ENSLBEG00000004740	cnot1	100	98.994	Labrus_bergylta
ENSXMAG00000006031	cnot1	100	89.589	ENSLACG00000010869	CNOT1	100	89.505	Latimeria_chalumnae
ENSXMAG00000006031	cnot1	100	92.233	ENSLOCG00000006324	cnot1	100	92.233	Lepisosteus_oculatus
ENSXMAG00000006031	cnot1	100	89.262	ENSLAFG00000000098	CNOT1	100	89.262	Loxodonta_africana
ENSXMAG00000006031	cnot1	100	89.567	ENSMFAG00000035888	CNOT1	100	89.567	Macaca_fascicularis
ENSXMAG00000006031	cnot1	100	89.337	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSXMAG00000006031	cnot1	100	86.856	ENSMNEG00000031820	CNOT1	100	88.961	Macaca_nemestrina
ENSXMAG00000006031	cnot1	100	88.028	ENSMLEG00000040933	CNOT1	100	88.028	Mandrillus_leucophaeus
ENSXMAG00000006031	cnot1	100	94.904	ENSMAMG00000016524	cnot1	100	94.989	Mastacembelus_armatus
ENSXMAG00000006031	cnot1	100	89.310	ENSMZEG00005016210	cnot1	100	89.268	Maylandia_zebra
ENSXMAG00000006031	cnot1	100	89.146	ENSMGAG00000001908	CNOT1	100	89.146	Meleagris_gallopavo
ENSXMAG00000006031	cnot1	100	89.613	ENSMICG00000007071	CNOT1	100	89.613	Microcebus_murinus
ENSXMAG00000006031	cnot1	100	89.169	ENSMOCG00000017969	Cnot1	100	89.211	Microtus_ochrogaster
ENSXMAG00000006031	cnot1	100	90.324	ENSMMOG00000019134	cnot1	100	90.450	Mola_mola
ENSXMAG00000006031	cnot1	100	88.838	ENSMODG00000014199	CNOT1	100	89.131	Monodelphis_domestica
ENSXMAG00000006031	cnot1	100	96.060	ENSMALG00000008645	cnot1	100	96.060	Monopterus_albus
ENSXMAG00000006031	cnot1	95	96.190	MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	Mus_caroli
ENSXMAG00000006031	cnot1	100	89.314	ENSMUSG00000036550	Cnot1	100	89.356	Mus_musculus
ENSXMAG00000006031	cnot1	100	89.211	MGP_PahariEiJ_G0023028	Cnot1	100	89.253	Mus_pahari
ENSXMAG00000006031	cnot1	100	89.211	MGP_SPRETEiJ_G0032549	Cnot1	100	89.253	Mus_spretus
ENSXMAG00000006031	cnot1	100	89.421	ENSMPUG00000004830	CNOT1	100	89.421	Mustela_putorius_furo
ENSXMAG00000006031	cnot1	100	89.253	ENSMLUG00000003728	CNOT1	100	89.211	Myotis_lucifugus
ENSXMAG00000006031	cnot1	100	89.253	ENSNGAG00000018628	Cnot1	100	89.295	Nannospalax_galili
ENSXMAG00000006031	cnot1	97	88.225	ENSNBRG00000019358	cnot1	100	88.225	Neolamprologus_brichardi
ENSXMAG00000006031	cnot1	100	89.416	ENSNLEG00000003566	CNOT1	100	89.416	Nomascus_leucogenys
ENSXMAG00000006031	cnot1	87	90.972	ENSMEUG00000006145	CNOT1	86	90.972	Notamacropus_eugenii
ENSXMAG00000006031	cnot1	85	97.778	ENSOPRG00000005604	CNOT1	86	97.778	Ochotona_princeps
ENSXMAG00000006031	cnot1	100	89.337	ENSODEG00000016337	CNOT1	100	89.379	Octodon_degus
ENSXMAG00000006031	cnot1	100	94.449	ENSONIG00000007358	cnot1	100	94.449	Oreochromis_niloticus
ENSXMAG00000006031	cnot1	90	88.569	ENSOANG00000012109	CNOT1	100	88.983	Ornithorhynchus_anatinus
ENSXMAG00000006031	cnot1	100	89.379	ENSOCUG00000006911	CNOT1	100	89.379	Oryctolagus_cuniculus
ENSXMAG00000006031	cnot1	100	93.989	ENSORLG00000013734	cnot1	100	93.989	Oryzias_latipes
ENSXMAG00000006031	cnot1	100	92.253	ENSORLG00020017012	cnot1	100	92.211	Oryzias_latipes_hni
ENSXMAG00000006031	cnot1	100	92.168	ENSORLG00015007091	cnot1	100	92.126	Oryzias_latipes_hsok
ENSXMAG00000006031	cnot1	100	91.467	ENSOMEG00000015124	cnot1	100	91.215	Oryzias_melastigma
ENSXMAG00000006031	cnot1	100	89.421	ENSOGAG00000000543	CNOT1	100	89.421	Otolemur_garnettii
ENSXMAG00000006031	cnot1	100	89.463	ENSOARG00000001567	CNOT1	100	89.463	Ovis_aries
ENSXMAG00000006031	cnot1	100	89.379	ENSPPAG00000022013	CNOT1	100	89.379	Pan_paniscus
ENSXMAG00000006031	cnot1	100	89.421	ENSPPRG00000004867	CNOT1	100	89.421	Panthera_pardus
ENSXMAG00000006031	cnot1	100	89.421	ENSPTIG00000012589	CNOT1	100	89.421	Panthera_tigris_altaica
ENSXMAG00000006031	cnot1	100	89.117	ENSPTRG00000008183	CNOT1	100	89.117	Pan_troglodytes
ENSXMAG00000006031	cnot1	100	86.407	ENSPANG00000020901	CNOT1	100	86.407	Papio_anubis
ENSXMAG00000006031	cnot1	100	94.042	ENSPKIG00000023538	CNOT1	100	94.085	Paramormyrops_kingsleyae
ENSXMAG00000006031	cnot1	100	85.952	ENSPKIG00000002914	CNOT1	100	85.702	Paramormyrops_kingsleyae
ENSXMAG00000006031	cnot1	100	89.043	ENSPSIG00000005499	CNOT1	100	89.043	Pelodiscus_sinensis
ENSXMAG00000006031	cnot1	100	78.689	ENSPMAG00000009381	cnot1	100	78.604	Petromyzon_marinus
ENSXMAG00000006031	cnot1	95	96.208	ENSPCIG00000007343	CNOT1	100	96.982	Phascolarctos_cinereus
ENSXMAG00000006031	cnot1	99	97.373	ENSPFOG00000003497	cnot1	100	97.373	Poecilia_formosa
ENSXMAG00000006031	cnot1	95	98.603	ENSPLAG00000014018	cnot1	100	98.603	Poecilia_latipinna
ENSXMAG00000006031	cnot1	95	98.603	ENSPMEG00000005868	cnot1	100	98.603	Poecilia_mexicana
ENSXMAG00000006031	cnot1	95	98.802	ENSPREG00000018793	cnot1	100	98.802	Poecilia_reticulata
ENSXMAG00000006031	cnot1	100	89.421	ENSPPYG00000007410	CNOT1	100	89.421	Pongo_abelii
ENSXMAG00000006031	cnot1	87	88.298	ENSPCAG00000003241	CNOT1	88	88.298	Procavia_capensis
ENSXMAG00000006031	cnot1	100	89.308	ENSPCOG00000027139	CNOT1	100	89.308	Propithecus_coquereli
ENSXMAG00000006031	cnot1	100	86.650	ENSPVAG00000004243	CNOT1	100	86.902	Pteropus_vampyrus
ENSXMAG00000006031	cnot1	100	91.396	ENSPNYG00000012919	cnot1	100	91.354	Pundamilia_nyererei
ENSXMAG00000006031	cnot1	100	94.256	ENSPNAG00000000246	cnot1	100	94.299	Pygocentrus_nattereri
ENSXMAG00000006031	cnot1	100	89.169	ENSRNOG00000012271	Cnot1	100	89.211	Rattus_norvegicus
ENSXMAG00000006031	cnot1	100	87.233	ENSRBIG00000044598	CNOT1	100	87.233	Rhinopithecus_bieti
ENSXMAG00000006031	cnot1	100	89.379	ENSRROG00000000906	CNOT1	100	89.379	Rhinopithecus_roxellana
ENSXMAG00000006031	cnot1	100	85.177	ENSSBOG00000029155	CNOT1	100	85.177	Saimiri_boliviensis_boliviensis
ENSXMAG00000006031	cnot1	100	89.211	ENSSHAG00000012187	CNOT1	100	89.169	Sarcophilus_harrisii
ENSXMAG00000006031	cnot1	100	90.227	ENSSFOG00015017614	cnot1	100	90.017	Scleropages_formosus
ENSXMAG00000006031	cnot1	100	92.365	ENSSMAG00000013844	cnot1	100	92.410	Scophthalmus_maximus
ENSXMAG00000006031	cnot1	100	91.295	ENSSDUG00000021491	cnot1	100	91.379	Seriola_dumerili
ENSXMAG00000006031	cnot1	100	94.147	ENSSLDG00000014816	cnot1	100	94.147	Seriola_lalandi_dorsalis
ENSXMAG00000006031	cnot1	83	97.400	ENSSARG00000000762	CNOT1	88	97.400	Sorex_araneus
ENSXMAG00000006031	cnot1	100	96.789	ENSSPAG00000018802	cnot1	100	96.789	Stegastes_partitus
ENSXMAG00000006031	cnot1	100	91.170	ENSSSCG00000002799	CNOT1	100	96.781	Sus_scrofa
ENSXMAG00000006031	cnot1	100	88.973	ENSTGUG00000005919	CNOT1	100	88.973	Taeniopygia_guttata
ENSXMAG00000006031	cnot1	100	92.047	ENSTNIG00000018706	cnot1	100	91.921	Tetraodon_nigroviridis
ENSXMAG00000006031	cnot1	82	98.592	ENSTBEG00000000720	CNOT1	80	98.592	Tupaia_belangeri
ENSXMAG00000006031	cnot1	95	88.037	ENSTTRG00000008460	CNOT1	95	88.037	Tursiops_truncatus
ENSXMAG00000006031	cnot1	100	89.421	ENSUAMG00000009251	CNOT1	100	89.421	Ursus_americanus
ENSXMAG00000006031	cnot1	100	89.421	ENSUMAG00000021291	CNOT1	100	89.421	Ursus_maritimus
ENSXMAG00000006031	cnot1	97	91.766	ENSVPAG00000008846	CNOT1	97	91.766	Vicugna_pacos
ENSXMAG00000006031	cnot1	100	90.664	ENSVVUG00000024037	CNOT1	100	93.587	Vulpes_vulpes
ENSXMAG00000006031	cnot1	100	83.921	ENSXETG00000015900	cnot1	100	83.921	Xenopus_tropicalis
ENSXMAG00000006031	cnot1	100	99.957	ENSXCOG00000013552	cnot1	100	99.957	Xiphophorus_couchianus