EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000006321 (Gene tree)
Gene ID
102238432
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Minus strand
Length
25455 bases
Position
chr16:21002276-21027730
Accession
102238432
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000036861ResIIIPF04851.151.7e-0811
ENSXMAP00000006373ResIIIPF04851.152.7e-0811
ENSXMAP00000006373BRKPF07533.166.2e-1711
ENSXMAP00000036861BRKPF07533.167.2e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000006381-4215-ENSXMAP000000063731404 (aa)-M3ZVX9
ENSXMAT00000023623-7929XM_023349119ENSXMAP000000368611630 (aa)XP_023204887UPI000C6E022F
Gene Model
Click here to download ENSXMAG00000006321's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006321's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000006321smarca4a10086.943ENSG00000127616SMARCA497100.000Homo_sapiens
ENSXMAG00000006321smarca4a9985.064ENSAPOG00000004542SMARCA49882.287Acanthochromis_polyacanthus
ENSXMAG00000006321smarca4a7791.249ENSAPOG00000003509smarca4a9888.994Acanthochromis_polyacanthus
ENSXMAG00000006321smarca4a10082.678ENSAMEG00000010868SMARCA410082.363Ailuropoda_melanoleuca
ENSXMAG00000006321smarca4a9992.597ENSACIG00000021550smarca4a9892.289Amphilophus_citrinellus
ENSXMAG00000006321smarca4a10085.106ENSACIG00000003035-7790.728Amphilophus_citrinellus
ENSXMAG00000006321smarca4a10083.633ENSAOCG00000009450-9785.137Amphiprion_ocellaris
ENSXMAG00000006321smarca4a10091.578ENSAOCG00000019167smarca4a10091.507Amphiprion_ocellaris
ENSXMAG00000006321smarca4a10091.649ENSAPEG00000015559smarca4a10091.578Amphiprion_percula
ENSXMAG00000006321smarca4a10083.369ENSAPEG00000023108-9980.751Amphiprion_percula
ENSXMAG00000006321smarca4a10083.983ENSATEG00000001094-9980.684Anabas_testudineus
ENSXMAG00000006321smarca4a10091.956ENSATEG00000011524smarca4a10092.139Anabas_testudineus
ENSXMAG00000006321smarca4a9986.737ENSANAG00000036991SMARCA410083.505Aotus_nancymaae
ENSXMAG00000006321smarca4a9992.737ENSACLG00000000163smarca4a9892.117Astatotilapia_calliptera
ENSXMAG00000006321smarca4a10084.713ENSACLG00000008638-9882.658Astatotilapia_calliptera
ENSXMAG00000006321smarca4a9985.046ENSAMXG00000011238-9684.911Astyanax_mexicanus
ENSXMAG00000006321smarca4a10086.624ENSAMXG00000021023smarca4a9085.967Astyanax_mexicanus
ENSXMAG00000006321smarca4a10086.463ENSBTAG00000019220SMARCA49886.062Bos_taurus
ENSXMAG00000006321smarca4a10082.874ENSCJAG00000005936SMARCA410082.854Callithrix_jacchus
ENSXMAG00000006321smarca4a10086.707ENSCAFG00000017584SMARCA410086.569Canis_familiaris
ENSXMAG00000006321smarca4a10086.707ENSCAFG00020024620SMARCA49986.386Canis_lupus_dingo
ENSXMAG00000006321smarca4a10082.460ENSCHIG00000015318SMARCA49881.960Capra_hircus
ENSXMAG00000006321smarca4a10086.768ENSTSYG00000012966SMARCA410086.463Carlito_syrichta
ENSXMAG00000006321smarca4a10082.432ENSCAPG00000015932SMARCA49389.437Cavia_aperea
ENSXMAG00000006321smarca4a10086.549ENSCPOG00000015549SMARCA410086.386Cavia_porcellus
ENSXMAG00000006321smarca4a10083.617ENSCCAG00000031660SMARCA49983.414Cebus_capucinus
ENSXMAG00000006321smarca4a10086.890ENSCATG00000029530SMARCA410086.691Cercocebus_atys
ENSXMAG00000006321smarca4a10086.272ENSCLAG00000011946SMARCA410086.142Chinchilla_lanigera
ENSXMAG00000006321smarca4a10086.366ENSCPBG00000009994SMARCA410086.228Chrysemys_picta_bellii
ENSXMAG00000006321smarca4a10086.829ENSCANG00000036013SMARCA410086.691Colobus_angolensis_palliatus
ENSXMAG00000006321smarca4a10086.707ENSCGRG00001016732Smarca410086.447Cricetulus_griseus_chok1gshd
ENSXMAG00000006321smarca4a10086.707ENSCGRG00000017242Smarca410086.447Cricetulus_griseus_crigri
ENSXMAG00000006321smarca4a9691.414ENSCSEG00000014771smarca4a10091.352Cynoglossus_semilaevis
ENSXMAG00000006321smarca4a10084.156ENSCVAG00000003018-9883.013Cyprinodon_variegatus
ENSXMAG00000006321smarca4a9995.531ENSCVAG00000006979smarca4a9995.034Cyprinodon_variegatus
ENSXMAG00000006321smarca4a9681.410ENSDARG00000104339SMARCA49482.658Danio_rerio
ENSXMAG00000006321smarca4a10088.153ENSDARG00000077226smarca4a10087.849Danio_rerio
ENSXMAG00000006321smarca4a9783.198ENSDNOG00000048847SMARCA49090.791Dasypus_novemcinctus
ENSXMAG00000006321smarca4a9479.971ENSDORG00000002544Smarca49280.357Dipodomys_ordii
ENSXMAG00000006321smarca4a9973.603ENSETEG00000013361SMARCA49475.143Echinops_telfairi
ENSXMAG00000006321smarca4a10086.646ENSEASG00005006167SMARCA410084.638Equus_asinus_asinus
ENSXMAG00000006321smarca4a10086.707ENSECAG00000008334SMARCA410086.508Equus_caballus
ENSXMAG00000006321smarca4a10079.689ENSELUG00000023232-9484.738Esox_lucius
ENSXMAG00000006321smarca4a10089.485ENSELUG00000010247smarca4a10087.319Esox_lucius
ENSXMAG00000006321smarca4a10086.671ENSFCAG00000004894SMARCA410086.472Felis_catus
ENSXMAG00000006321smarca4a9681.530ENSFALG00000004208SMARCA49283.890Ficedula_albicollis
ENSXMAG00000006321smarca4a10084.869ENSFDAG00000012237SMARCA49786.370Fukomys_damarensis
ENSXMAG00000006321smarca4a10083.721ENSFHEG00000007902-9982.707Fundulus_heteroclitus
ENSXMAG00000006321smarca4a10096.098ENSFHEG00000010182smarca4a10096.098Fundulus_heteroclitus
ENSXMAG00000006321smarca4a9079.931ENSGMOG00000005756-9079.056Gadus_morhua
ENSXMAG00000006321smarca4a8991.525ENSGMOG00000002649smarca4a9488.393Gadus_morhua
ENSXMAG00000006321smarca4a8184.525ENSGALG00000047145SMARCA410085.762Gallus_gallus
ENSXMAG00000006321smarca4a9199.057ENSGAFG00000014900smarca4a10099.057Gambusia_affinis
ENSXMAG00000006321smarca4a10082.232ENSGAFG00000008827-8882.788Gambusia_affinis
ENSXMAG00000006321smarca4a9890.592ENSGACG00000006691smarca4a10089.653Gasterosteus_aculeatus
ENSXMAG00000006321smarca4a9978.448ENSGACG00000016033-10077.897Gasterosteus_aculeatus
ENSXMAG00000006321smarca4a10086.585ENSGAGG00000016757SMARCA410086.447Gopherus_agassizii
ENSXMAG00000006321smarca4a10086.890ENSGGOG00000009882SMARCA410086.691Gorilla_gorilla
ENSXMAG00000006321smarca4a10084.855ENSHBUG00000005447-9982.895Haplochromis_burtoni
ENSXMAG00000006321smarca4a10092.992ENSHBUG00000021172smarca4a10092.444Haplochromis_burtoni
ENSXMAG00000006321smarca4a10086.339ENSHGLG00000010519SMARCA410086.411Heterocephalus_glaber_female
ENSXMAG00000006321smarca4a10085.584ENSHGLG00100013774SMARCA410085.445Heterocephalus_glaber_male
ENSXMAG00000006321smarca4a10088.503ENSHCOG00000009510smarca4a9691.555Hippocampus_comes
ENSXMAG00000006321smarca4a9883.012ENSIPUG00000016346-9782.872Ictalurus_punctatus
ENSXMAG00000006321smarca4a10088.207ENSIPUG00000006107smarca4a10087.842Ictalurus_punctatus
ENSXMAG00000006321smarca4a10086.646ENSSTOG00000007939SMARCA410086.447Ictidomys_tridecemlineatus
ENSXMAG00000006321smarca4a10084.877ENSJJAG00000012877Smarca410084.321Jaculus_jaculus
ENSXMAG00000006321smarca4a10094.611ENSKMAG00000011931smarca4a10094.611Kryptolebias_marmoratus
ENSXMAG00000006321smarca4a10084.269ENSKMAG00000019518-9885.071Kryptolebias_marmoratus
ENSXMAG00000006321smarca4a10075.727ENSLBEG00000020655-7389.206Labrus_bergylta
ENSXMAG00000006321smarca4a10088.227ENSLBEG00000017383smarca4a9787.109Labrus_bergylta
ENSXMAG00000006321smarca4a5777.262ENSLACG00000015309SMARCA410079.466Latimeria_chalumnae
ENSXMAG00000006321smarca4a10084.930ENSLOCG00000007820smarca4a9984.559Lepisosteus_oculatus
ENSXMAG00000006321smarca4a10086.792ENSLAFG00000001433SMARCA410086.594Loxodonta_africana
ENSXMAG00000006321smarca4a10086.890ENSMFAG00000032146SMARCA49986.691Macaca_fascicularis
ENSXMAG00000006321smarca4a10086.890ENSMMUG00000012042SMARCA49591.758Macaca_mulatta
ENSXMAG00000006321smarca4a10086.646ENSMNEG00000028512SMARCA410086.508Macaca_nemestrina
ENSXMAG00000006321smarca4a10086.829ENSMLEG00000034976SMARCA410086.472Mandrillus_leucophaeus
ENSXMAG00000006321smarca4a10083.657ENSMAMG00000002841-9885.328Mastacembelus_armatus
ENSXMAG00000006321smarca4a10092.448ENSMAMG00000009256smarca4a10091.900Mastacembelus_armatus
ENSXMAG00000006321smarca4a10083.634ENSMZEG00005023861-9883.354Maylandia_zebra
ENSXMAG00000006321smarca4a10092.875ENSMZEG00005003889smarca4a10092.326Maylandia_zebra
ENSXMAG00000006321smarca4a10086.427ENSMAUG00000020731Smarca410086.167Mesocricetus_auratus
ENSXMAG00000006321smarca4a10086.671ENSMICG00000009806SMARCA410086.472Microcebus_murinus
ENSXMAG00000006321smarca4a10086.366ENSMOCG00000022209Smarca410086.106Microtus_ochrogaster
ENSXMAG00000006321smarca4a10083.062ENSMMOG00000008466-8882.541Mola_mola
ENSXMAG00000006321smarca4a10086.172ENSMMOG00000007571smarca4a9888.540Mola_mola
ENSXMAG00000006321smarca4a10085.586ENSMODG00000006287SMARCA410084.671Monodelphis_domestica
ENSXMAG00000006321smarca4a9984.539ENSMALG00000021534-9984.170Monopterus_albus
ENSXMAG00000006321smarca4a9691.846ENSMALG00000003388smarca4a10091.707Monopterus_albus
ENSXMAG00000006321smarca4a10086.638MGP_CAROLIEiJ_G0031879Smarca410086.378Mus_caroli
ENSXMAG00000006321smarca4a10086.638ENSMUSG00000032187Smarca410086.378Mus_musculus
ENSXMAG00000006321smarca4a10086.394MGP_PahariEiJ_G0014745Smarca410086.194Mus_pahari
ENSXMAG00000006321smarca4a10086.638MGP_SPRETEiJ_G0033003Smarca410086.378Mus_spretus
ENSXMAG00000006321smarca4a10086.768ENSMPUG00000005711SMARCA410086.569Mustela_putorius_furo
ENSXMAG00000006321smarca4a10086.829ENSMLUG00000004491-10086.752Myotis_lucifugus
ENSXMAG00000006321smarca4a10086.159ENSNGAG00000021852Smarca410086.159Nannospalax_galili
ENSXMAG00000006321smarca4a9984.915ENSNBRG00000018865-8390.555Neolamprologus_brichardi
ENSXMAG00000006321smarca4a10092.150ENSNBRG00000011457smarca4a9091.513Neolamprologus_brichardi
ENSXMAG00000006321smarca4a9984.983ENSNLEG00000012389SMARCA49484.136Nomascus_leucogenys
ENSXMAG00000006321smarca4a9289.655ENSOPRG00000000885-7689.655Ochotona_princeps
ENSXMAG00000006321smarca4a10084.913ENSODEG00000017127SMARCA48488.231Octodon_degus
ENSXMAG00000006321smarca4a10083.792ENSONIG00000018040-10082.895Oreochromis_niloticus
ENSXMAG00000006321smarca4a10093.053ENSONIG00000008196smarca4a10092.505Oreochromis_niloticus
ENSXMAG00000006321smarca4a9980.716ENSOCUG00000001787SMARCA49880.088Oryctolagus_cuniculus
ENSXMAG00000006321smarca4a10091.978ENSORLG00000015452smarca4a10091.059Oryzias_latipes
ENSXMAG00000006321smarca4a9682.040ENSORLG00000003955-9682.167Oryzias_latipes
ENSXMAG00000006321smarca4a10091.733ENSORLG00020004611smarca4a10091.121Oryzias_latipes_hni
ENSXMAG00000006321smarca4a9682.053ENSORLG00020009728-9682.302Oryzias_latipes_hni
ENSXMAG00000006321smarca4a10091.672ENSORLG00015016560smarca4a10090.876Oryzias_latipes_hsok
ENSXMAG00000006321smarca4a9982.719ENSORLG00015007739-9682.167Oryzias_latipes_hsok
ENSXMAG00000006321smarca4a9782.880ENSOMEG00000016626-9682.652Oryzias_melastigma
ENSXMAG00000006321smarca4a10092.218ENSOMEG00000007486smarca4a10091.544Oryzias_melastigma
ENSXMAG00000006321smarca4a9983.986ENSOGAG00000016148SMARCA410085.266Otolemur_garnettii
ENSXMAG00000006321smarca4a10085.862ENSOARG00000017454SMARCA49885.688Ovis_aries
ENSXMAG00000006321smarca4a10086.890ENSPPAG00000043191SMARCA410086.691Pan_paniscus
ENSXMAG00000006321smarca4a10086.671ENSPPRG00000000064SMARCA410086.472Panthera_pardus
ENSXMAG00000006321smarca4a7985.747ENSPTIG00000017447SMARCA410080.000Panthera_tigris_altaica
ENSXMAG00000006321smarca4a10086.890ENSPTRG00000010488SMARCA410086.691Pan_troglodytes
ENSXMAG00000006321smarca4a10086.768ENSPANG00000011042SMARCA49986.630Papio_anubis
ENSXMAG00000006321smarca4a10087.138ENSPKIG00000007770SMARCA410087.303Paramormyrops_kingsleyae
ENSXMAG00000006321smarca4a10085.052ENSPKIG00000010087-9885.375Paramormyrops_kingsleyae
ENSXMAG00000006321smarca4a10080.967ENSPSIG00000005547SMARCA48685.552Pelodiscus_sinensis
ENSXMAG00000006321smarca4a10086.427ENSPEMG00000020389Smarca410086.167Peromyscus_maniculatus_bairdii
ENSXMAG00000006321smarca4a10087.317ENSPCIG00000017138SMARCA410086.935Phascolarctos_cinereus
ENSXMAG00000006321smarca4a10098.166ENSPFOG00000007892smarca4a10098.166Poecilia_formosa
ENSXMAG00000006321smarca4a10083.244ENSPFOG00000012930-9981.412Poecilia_formosa
ENSXMAG00000006321smarca4a10098.166ENSPLAG00000014294smarca4a10098.166Poecilia_latipinna
ENSXMAG00000006321smarca4a10084.471ENSPLAG00000018616-9885.059Poecilia_latipinna
ENSXMAG00000006321smarca4a9798.418ENSPMEG00000003725smarca4a9898.418Poecilia_mexicana
ENSXMAG00000006321smarca4a10085.674ENSPMEG00000008929-9784.436Poecilia_mexicana
ENSXMAG00000006321smarca4a10081.947ENSPREG00000014823-9781.481Poecilia_reticulata
ENSXMAG00000006321smarca4a10097.928ENSPREG00000014608smarca4a10097.928Poecilia_reticulata
ENSXMAG00000006321smarca4a10085.117ENSPPYG00000009568SMARCA410084.440Pongo_abelii
ENSXMAG00000006321smarca4a7986.755ENSPCAG00000014054SMARCA47591.406Procavia_capensis
ENSXMAG00000006321smarca4a10086.768ENSPCOG00000023011SMARCA410086.411Propithecus_coquereli
ENSXMAG00000006321smarca4a9681.081ENSPVAG00000007787SMARCA49680.651Pteropus_vampyrus
ENSXMAG00000006321smarca4a10084.965ENSPNYG00000023995-7790.641Pundamilia_nyererei
ENSXMAG00000006321smarca4a10092.242ENSPNYG00000000717smarca4a9692.569Pundamilia_nyererei
ENSXMAG00000006321smarca4a10086.229ENSPNAG00000024136smarca4a9783.114Pygocentrus_nattereri
ENSXMAG00000006321smarca4a9984.397ENSPNAG00000006636-9385.600Pygocentrus_nattereri
ENSXMAG00000006321smarca4a10086.638ENSRNOG00000009271Smarca410086.378Rattus_norvegicus
ENSXMAG00000006321smarca4a10086.829ENSRBIG00000038696SMARCA49986.630Rhinopithecus_bieti
ENSXMAG00000006321smarca4a10086.829ENSRROG00000045509SMARCA410086.630Rhinopithecus_roxellana
ENSXMAG00000006321smarca4a10086.638ENSSBOG00000026896SMARCA49886.728Saimiri_boliviensis_boliviensis
ENSXMAG00000006321smarca4a10087.256ENSSHAG00000001642SMARCA410086.996Sarcophilus_harrisii
ENSXMAG00000006321smarca4a9190.862ENSSFOG00015009921-9489.607Scleropages_formosus
ENSXMAG00000006321smarca4a10089.321ENSSFOG00015013823smarca410087.675Scleropages_formosus
ENSXMAG00000006321smarca4a10080.584ENSSMAG00000014082-9980.762Scophthalmus_maximus
ENSXMAG00000006321smarca4a10091.123ENSSMAG00000003200smarca4a10090.217Scophthalmus_maximus
ENSXMAG00000006321smarca4a10088.293ENSSDUG00000017298smarca4a10086.906Seriola_dumerili
ENSXMAG00000006321smarca4a9984.479ENSSDUG00000005388-9585.290Seriola_dumerili
ENSXMAG00000006321smarca4a10092.746ENSSLDG00000024486smarca4a10092.042Seriola_lalandi_dorsalis
ENSXMAG00000006321smarca4a10084.003ENSSLDG00000023663-9785.972Seriola_lalandi_dorsalis
ENSXMAG00000006321smarca4a6195.652ENSSARG00000013477SMARCA48295.652Sorex_araneus
ENSXMAG00000006321smarca4a10081.383ENSSPUG00000004558SMARCA49883.047Sphenodon_punctatus
ENSXMAG00000006321smarca4a9986.973ENSSPAG00000012533-9686.425Stegastes_partitus
ENSXMAG00000006321smarca4a10092.150ENSSPAG00000004248smarca4a10091.178Stegastes_partitus
ENSXMAG00000006321smarca4a10086.792ENSSSCG00000013629SMARCA410086.594Sus_scrofa
ENSXMAG00000006321smarca4a5689.275ENSTGUG00000015488-9883.790Taeniopygia_guttata
ENSXMAG00000006321smarca4a9980.081ENSTRUG00000001378SMARCA49882.111Takifugu_rubripes
ENSXMAG00000006321smarca4a10086.233ENSTRUG00000004885smarca4a10085.325Takifugu_rubripes
ENSXMAG00000006321smarca4a10081.818ENSTNIG00000004536SMARCA410082.349Tetraodon_nigroviridis
ENSXMAG00000006321smarca4a7990.244ENSTNIG00000004859-10090.747Tetraodon_nigroviridis
ENSXMAG00000006321smarca4a53100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSXMAG00000006321smarca4a10083.682ENSTTRG00000009519SMARCA410082.885Tursiops_truncatus
ENSXMAG00000006321smarca4a10086.768ENSUAMG00000014661SMARCA410086.569Ursus_americanus
ENSXMAG00000006321smarca4a10084.174ENSUMAG00000022005SMARCA49890.371Ursus_maritimus
ENSXMAG00000006321smarca4a10086.707ENSVVUG00000017820SMARCA49786.569Vulpes_vulpes
ENSXMAG00000006321smarca4a10081.769ENSXETG00000009355smarca410080.767Xenopus_tropicalis
ENSXMAG00000006321smarca4a10084.457ENSXCOG00000013494-9881.017Xiphophorus_couchianus
ENSXMAG00000006321smarca4a10084.681ENSXMAG00000007030-9981.560Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us