EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000006334 (Gene tree)
Gene ID: 102232172
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 25212 bases
Position: chr2:4292408-4317619
Accession: 102232172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000037050	CPSF_A	PF03178.15	2.2e-99	1	1
ENSXMAP00000006383	CPSF_A	PF03178.15	1.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000006391	-	2985	-	ENSXMAP00000006383	994 (aa)	-	M3ZVY9
ENSXMAT00000024128	-	4716	XM_005795800	ENSXMAP00000037050	1217 (aa)	XP_005795857	UPI000293D92F

Gene Model

Click here to download ENSXMAG00000006334's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000006334	sf3b3	99	93.801	ENSG00000189091	SF3B3	100	96.774	Homo_sapiens
ENSXMAG00000006334	sf3b3	99	97.967	ENSAPOG00000006172	sf3b3	98	97.950	Acanthochromis_polyacanthus
ENSXMAG00000006334	sf3b3	99	93.617	ENSAMEG00000002187	SF3B3	100	92.541	Ailuropoda_melanoleuca
ENSXMAG00000006334	sf3b3	89	98.758	ENSACIG00000016487	sf3b3	99	95.621	Amphilophus_citrinellus
ENSXMAG00000006334	sf3b3	100	98.028	ENSAOCG00000007158	sf3b3	100	98.028	Amphiprion_ocellaris
ENSXMAG00000006334	sf3b3	100	98.028	ENSAPEG00000022786	sf3b3	100	98.028	Amphiprion_percula
ENSXMAG00000006334	sf3b3	100	98.110	ENSATEG00000013708	sf3b3	100	98.110	Anabas_testudineus
ENSXMAG00000006334	sf3b3	99	92.893	ENSAPLG00000004996	SF3B3	99	92.893	Anas_platyrhynchos
ENSXMAG00000006334	sf3b3	99	94.207	ENSACAG00000001817	SF3B3	100	93.016	Anolis_carolinensis
ENSXMAG00000006334	sf3b3	99	93.801	ENSANAG00000028001	SF3B3	100	92.687	Aotus_nancymaae
ENSXMAG00000006334	sf3b3	99	98.476	ENSACLG00000022555	sf3b3	98	98.121	Astatotilapia_calliptera
ENSXMAG00000006334	sf3b3	100	97.288	ENSAMXG00000003410	sf3b3	100	97.288	Astyanax_mexicanus
ENSXMAG00000006334	sf3b3	99	93.801	ENSBTAG00000010627	SF3B3	100	92.687	Bos_taurus
ENSXMAG00000006334	sf3b3	100	60.390	WBGene00019323	teg-4	100	60.390	Caenorhabditis_elegans
ENSXMAG00000006334	sf3b3	99	93.801	ENSCJAG00000014773	SF3B3	99	92.687	Callithrix_jacchus
ENSXMAG00000006334	sf3b3	99	93.902	ENSCAFG00000020151	SF3B3	100	92.769	Canis_familiaris
ENSXMAG00000006334	sf3b3	99	93.902	ENSCAFG00020020912	SF3B3	100	92.769	Canis_lupus_dingo
ENSXMAG00000006334	sf3b3	99	93.902	ENSCHIG00000019822	SF3B3	100	92.769	Capra_hircus
ENSXMAG00000006334	sf3b3	99	93.801	ENSTSYG00000007910	SF3B3	100	92.687	Carlito_syrichta
ENSXMAG00000006334	sf3b3	84	78.490	ENSCAPG00000001484	SF3B3	92	78.490	Cavia_aperea
ENSXMAG00000006334	sf3b3	100	91.372	ENSCPOG00000000586	SF3B3	100	91.372	Cavia_porcellus
ENSXMAG00000006334	sf3b3	99	93.801	ENSCCAG00000017736	SF3B3	100	92.687	Cebus_capucinus
ENSXMAG00000006334	sf3b3	99	93.801	ENSCATG00000036562	SF3B3	100	92.687	Cercocebus_atys
ENSXMAG00000006334	sf3b3	99	93.801	ENSCLAG00000003921	SF3B3	100	92.687	Chinchilla_lanigera
ENSXMAG00000006334	sf3b3	99	93.801	ENSCSAG00000004371	SF3B3	100	92.687	Chlorocebus_sabaeus
ENSXMAG00000006334	sf3b3	90	89.097	ENSCHOG00000001878	SF3B3	90	89.097	Choloepus_hoffmanni
ENSXMAG00000006334	sf3b3	99	93.699	ENSCPBG00000015853	SF3B3	100	92.523	Chrysemys_picta_bellii
ENSXMAG00000006334	sf3b3	100	79.803	ENSCING00000001342	-	100	79.803	Ciona_intestinalis
ENSXMAG00000006334	sf3b3	99	79.513	ENSCSAVG00000011454	-	100	78.489	Ciona_savignyi
ENSXMAG00000006334	sf3b3	99	93.801	ENSCANG00000042920	SF3B3	100	89.811	Colobus_angolensis_palliatus
ENSXMAG00000006334	sf3b3	99	93.699	ENSCGRG00001015908	Sf3b3	100	92.605	Cricetulus_griseus_chok1gshd
ENSXMAG00000006334	sf3b3	99	93.699	ENSCGRG00000010180	Sf3b3	100	92.605	Cricetulus_griseus_crigri
ENSXMAG00000006334	sf3b3	99	97.465	ENSCSEG00000014192	sf3b3	98	97.465	Cynoglossus_semilaevis
ENSXMAG00000006334	sf3b3	100	98.767	ENSCVAG00000010459	sf3b3	100	98.767	Cyprinodon_variegatus
ENSXMAG00000006334	sf3b3	100	96.631	ENSDARG00000103553	sf3b3	100	96.631	Danio_rerio
ENSXMAG00000006334	sf3b3	85	92.478	ENSDNOG00000043626	SF3B3	100	92.478	Dasypus_novemcinctus
ENSXMAG00000006334	sf3b3	99	93.801	ENSDORG00000014176	Sf3b3	100	92.687	Dipodomys_ordii
ENSXMAG00000006334	sf3b3	99	76.128	FBgn0035162	Sf3b3	100	74.797	Drosophila_melanogaster
ENSXMAG00000006334	sf3b3	84	95.161	ENSETEG00000002729	SF3B3	84	95.161	Echinops_telfairi
ENSXMAG00000006334	sf3b3	100	85.867	ENSEBUG00000006117	sf3b3	100	85.867	Eptatretus_burgeri
ENSXMAG00000006334	sf3b3	99	93.902	ENSEASG00005013376	SF3B3	100	92.769	Equus_asinus_asinus
ENSXMAG00000006334	sf3b3	99	93.902	ENSECAG00000014053	SF3B3	100	92.769	Equus_caballus
ENSXMAG00000006334	sf3b3	93	92.632	ENSEEUG00000015611	SF3B3	93	92.632	Erinaceus_europaeus
ENSXMAG00000006334	sf3b3	100	95.656	ENSELUG00000015417	sf3b3	100	95.656	Esox_lucius
ENSXMAG00000006334	sf3b3	99	93.902	ENSFCAG00000009487	SF3B3	100	92.769	Felis_catus
ENSXMAG00000006334	sf3b3	99	93.598	ENSFALG00000007372	SF3B3	100	92.523	Ficedula_albicollis
ENSXMAG00000006334	sf3b3	99	93.801	ENSFDAG00000002608	SF3B3	100	92.687	Fukomys_damarensis
ENSXMAG00000006334	sf3b3	100	99.343	ENSFHEG00000017824	sf3b3	100	99.343	Fundulus_heteroclitus
ENSXMAG00000006334	sf3b3	100	93.186	ENSGMOG00000008139	sf3b3	100	93.186	Gadus_morhua
ENSXMAG00000006334	sf3b3	99	93.801	ENSGALG00000002531	SF3B3	100	92.769	Gallus_gallus
ENSXMAG00000006334	sf3b3	100	99.589	ENSGAFG00000015206	sf3b3	100	99.589	Gambusia_affinis
ENSXMAG00000006334	sf3b3	100	97.373	ENSGACG00000002646	sf3b3	100	97.373	Gasterosteus_aculeatus
ENSXMAG00000006334	sf3b3	99	93.699	ENSGAGG00000006746	SF3B3	97	92.656	Gopherus_agassizii
ENSXMAG00000006334	sf3b3	99	93.801	ENSGGOG00000003246	SF3B3	100	92.687	Gorilla_gorilla
ENSXMAG00000006334	sf3b3	92	91.063	ENSHBUG00000005960	sf3b3	99	91.063	Haplochromis_burtoni
ENSXMAG00000006334	sf3b3	99	93.801	ENSHGLG00000010135	SF3B3	100	92.687	Heterocephalus_glaber_female
ENSXMAG00000006334	sf3b3	100	90.592	ENSHGLG00100011148	SF3B3	100	90.592	Heterocephalus_glaber_male
ENSXMAG00000006334	sf3b3	100	97.535	ENSHCOG00000011981	sf3b3	100	97.535	Hippocampus_comes
ENSXMAG00000006334	sf3b3	100	97.288	ENSIPUG00000020435	sf3b3	100	97.288	Ictalurus_punctatus
ENSXMAG00000006334	sf3b3	99	93.801	ENSSTOG00000007065	SF3B3	100	92.687	Ictidomys_tridecemlineatus
ENSXMAG00000006334	sf3b3	99	93.801	ENSJJAG00000003948	Sf3b3	100	92.687	Jaculus_jaculus
ENSXMAG00000006334	sf3b3	99	98.171	ENSKMAG00000004066	sf3b3	99	98.121	Kryptolebias_marmoratus
ENSXMAG00000006334	sf3b3	100	97.946	ENSLBEG00000018302	sf3b3	100	97.946	Labrus_bergylta
ENSXMAG00000006334	sf3b3	98	89.701	ENSLACG00000012501	SF3B3	99	89.701	Latimeria_chalumnae
ENSXMAG00000006334	sf3b3	100	96.470	ENSLOCG00000007566	sf3b3	100	96.470	Lepisosteus_oculatus
ENSXMAG00000006334	sf3b3	99	93.902	ENSLAFG00000012219	SF3B3	100	92.769	Loxodonta_africana
ENSXMAG00000006334	sf3b3	99	93.801	ENSMFAG00000045487	SF3B3	100	92.687	Macaca_fascicularis
ENSXMAG00000006334	sf3b3	99	93.801	ENSMMUG00000017812	SF3B3	100	92.687	Macaca_mulatta
ENSXMAG00000006334	sf3b3	99	93.801	ENSMNEG00000033385	SF3B3	100	92.687	Macaca_nemestrina
ENSXMAG00000006334	sf3b3	100	89.154	ENSMLEG00000043891	SF3B3	100	89.154	Mandrillus_leucophaeus
ENSXMAG00000006334	sf3b3	100	98.192	ENSMAMG00000016837	sf3b3	100	98.192	Mastacembelus_armatus
ENSXMAG00000006334	sf3b3	89	95.097	ENSMZEG00005026015	sf3b3	99	95.097	Maylandia_zebra
ENSXMAG00000006334	sf3b3	100	98.192	ENSMZEG00005010836	sf3b3	100	98.192	Maylandia_zebra
ENSXMAG00000006334	sf3b3	99	93.801	ENSMGAG00000001597	SF3B3	100	92.769	Meleagris_gallopavo
ENSXMAG00000006334	sf3b3	81	76.030	ENSMAUG00000013618	Sf3b3	95	76.404	Mesocricetus_auratus
ENSXMAG00000006334	sf3b3	100	91.632	ENSMICG00000001363	SF3B3	100	91.632	Microcebus_murinus
ENSXMAG00000006334	sf3b3	99	93.699	ENSMOCG00000006108	Sf3b3	100	92.605	Microtus_ochrogaster
ENSXMAG00000006334	sf3b3	89	95.560	ENSMMOG00000002598	sf3b3	97	95.560	Mola_mola
ENSXMAG00000006334	sf3b3	100	88.670	ENSMODG00000014363	SF3B3	100	88.670	Monodelphis_domestica
ENSXMAG00000006334	sf3b3	100	97.617	ENSMALG00000008014	sf3b3	100	97.617	Monopterus_albus
ENSXMAG00000006334	sf3b3	99	93.699	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.605	Mus_caroli
ENSXMAG00000006334	sf3b3	99	93.699	ENSMUSG00000033732	Sf3b3	100	92.605	Mus_musculus
ENSXMAG00000006334	sf3b3	99	93.699	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.605	Mus_spretus
ENSXMAG00000006334	sf3b3	99	93.902	ENSMPUG00000010277	SF3B3	100	92.769	Mustela_putorius_furo
ENSXMAG00000006334	sf3b3	99	93.699	ENSMLUG00000014607	SF3B3	100	92.605	Myotis_lucifugus
ENSXMAG00000006334	sf3b3	99	93.801	ENSNGAG00000021903	Sf3b3	100	92.687	Nannospalax_galili
ENSXMAG00000006334	sf3b3	83	94.286	ENSNBRG00000007197	sf3b3	99	94.286	Neolamprologus_brichardi
ENSXMAG00000006334	sf3b3	100	91.215	ENSNLEG00000016127	SF3B3	100	91.215	Nomascus_leucogenys
ENSXMAG00000006334	sf3b3	92	88.740	ENSMEUG00000004479	SF3B3	94	88.740	Notamacropus_eugenii
ENSXMAG00000006334	sf3b3	98	89.606	ENSOPRG00000009847	SF3B3	100	89.606	Ochotona_princeps
ENSXMAG00000006334	sf3b3	99	93.801	ENSODEG00000014154	SF3B3	100	92.687	Octodon_degus
ENSXMAG00000006334	sf3b3	100	98.110	ENSONIG00000011198	sf3b3	100	98.110	Oreochromis_niloticus
ENSXMAG00000006334	sf3b3	99	94.004	ENSOANG00000001161	-	100	92.851	Ornithorhynchus_anatinus
ENSXMAG00000006334	sf3b3	100	90.715	ENSOCUG00000004139	SF3B3	100	90.715	Oryctolagus_cuniculus
ENSXMAG00000006334	sf3b3	100	97.535	ENSORLG00000013472	sf3b3	100	97.535	Oryzias_latipes
ENSXMAG00000006334	sf3b3	100	97.535	ENSORLG00020017473	sf3b3	100	97.535	Oryzias_latipes_hni
ENSXMAG00000006334	sf3b3	100	97.699	ENSORLG00015007710	sf3b3	100	97.699	Oryzias_latipes_hsok
ENSXMAG00000006334	sf3b3	100	97.535	ENSOMEG00000014483	sf3b3	100	97.535	Oryzias_melastigma
ENSXMAG00000006334	sf3b3	99	93.414	ENSOGAG00000016051	SF3B3	100	92.377	Otolemur_garnettii
ENSXMAG00000006334	sf3b3	99	93.617	ENSOARG00000004816	SF3B3	100	92.541	Ovis_aries
ENSXMAG00000006334	sf3b3	99	93.801	ENSPPAG00000026807	SF3B3	100	92.687	Pan_paniscus
ENSXMAG00000006334	sf3b3	99	93.902	ENSPPRG00000001686	SF3B3	100	92.769	Panthera_pardus
ENSXMAG00000006334	sf3b3	86	94.145	ENSPTIG00000020382	SF3B3	100	89.972	Panthera_tigris_altaica
ENSXMAG00000006334	sf3b3	99	93.801	ENSPTRG00000008308	SF3B3	100	92.687	Pan_troglodytes
ENSXMAG00000006334	sf3b3	99	93.801	ENSPANG00000024075	SF3B3	100	92.687	Papio_anubis
ENSXMAG00000006334	sf3b3	100	96.549	ENSPKIG00000002712	sf3b3	100	96.549	Paramormyrops_kingsleyae
ENSXMAG00000006334	sf3b3	89	92.640	ENSPSIG00000002232	SF3B3	100	92.640	Pelodiscus_sinensis
ENSXMAG00000006334	sf3b3	99	93.699	ENSPEMG00000008603	Sf3b3	100	92.605	Peromyscus_maniculatus_bairdii
ENSXMAG00000006334	sf3b3	99	91.159	ENSPMAG00000001793	sf3b3	100	90.140	Petromyzon_marinus
ENSXMAG00000006334	sf3b3	99	94.004	ENSPCIG00000014927	SF3B3	100	92.851	Phascolarctos_cinereus
ENSXMAG00000006334	sf3b3	100	99.671	ENSPFOG00000015516	sf3b3	100	99.671	Poecilia_formosa
ENSXMAG00000006334	sf3b3	100	99.671	ENSPLAG00000014330	sf3b3	100	99.671	Poecilia_latipinna
ENSXMAG00000006334	sf3b3	100	99.753	ENSPMEG00000019856	sf3b3	100	99.753	Poecilia_mexicana
ENSXMAG00000006334	sf3b3	99	99.395	ENSPREG00000019669	sf3b3	98	99.395	Poecilia_reticulata
ENSXMAG00000006334	sf3b3	95	92.405	ENSPPYG00000007539	SF3B3	100	92.405	Pongo_abelii
ENSXMAG00000006334	sf3b3	100	72.145	ENSPCAG00000002623	SF3B3	100	72.145	Procavia_capensis
ENSXMAG00000006334	sf3b3	84	96.262	ENSPCOG00000026582	SF3B3	100	96.262	Propithecus_coquereli
ENSXMAG00000006334	sf3b3	99	93.902	ENSPVAG00000000684	SF3B3	100	92.687	Pteropus_vampyrus
ENSXMAG00000006334	sf3b3	100	98.110	ENSPNYG00000003528	sf3b3	100	98.110	Pundamilia_nyererei
ENSXMAG00000006334	sf3b3	100	96.960	ENSPNAG00000015419	sf3b3	100	96.960	Pygocentrus_nattereri
ENSXMAG00000006334	sf3b3	99	93.699	ENSRNOG00000017724	Sf3b3	100	92.605	Rattus_norvegicus
ENSXMAG00000006334	sf3b3	99	93.801	ENSRBIG00000021904	SF3B3	100	92.687	Rhinopithecus_bieti
ENSXMAG00000006334	sf3b3	99	93.801	ENSRROG00000045703	SF3B3	100	92.687	Rhinopithecus_roxellana
ENSXMAG00000006334	sf3b3	99	93.801	ENSSBOG00000029156	SF3B3	100	92.687	Saimiri_boliviensis_boliviensis
ENSXMAG00000006334	sf3b3	99	94.004	ENSSHAG00000000372	SF3B3	100	92.851	Sarcophilus_harrisii
ENSXMAG00000006334	sf3b3	100	96.878	ENSSFOG00015012877	sf3b3	100	96.878	Scleropages_formosus
ENSXMAG00000006334	sf3b3	100	97.535	ENSSMAG00000014386	sf3b3	100	97.535	Scophthalmus_maximus
ENSXMAG00000006334	sf3b3	100	98.110	ENSSDUG00000021201	sf3b3	100	98.110	Seriola_dumerili
ENSXMAG00000006334	sf3b3	100	98.192	ENSSLDG00000017532	sf3b3	100	98.192	Seriola_lalandi_dorsalis
ENSXMAG00000006334	sf3b3	99	93.699	ENSSARG00000006917	SF3B3	93	92.739	Sorex_araneus
ENSXMAG00000006334	sf3b3	99	93.598	ENSSPUG00000006253	SF3B3	100	92.523	Sphenodon_punctatus
ENSXMAG00000006334	sf3b3	100	90.386	ENSSPAG00000003125	sf3b3	100	90.386	Stegastes_partitus
ENSXMAG00000006334	sf3b3	99	93.909	ENSSSCG00000025323	SF3B3	100	92.769	Sus_scrofa
ENSXMAG00000006334	sf3b3	99	93.801	ENSTGUG00000006082	SF3B3	100	92.693	Taeniopygia_guttata
ENSXMAG00000006334	sf3b3	53	86.174	ENSTRUG00000015623	sf3b3	88	87.245	Takifugu_rubripes
ENSXMAG00000006334	sf3b3	99	97.764	ENSTNIG00000004857	sf3b3	100	97.610	Tetraodon_nigroviridis
ENSXMAG00000006334	sf3b3	99	77.337	ENSTBEG00000002946	SF3B3	100	78.521	Tupaia_belangeri
ENSXMAG00000006334	sf3b3	100	91.947	ENSTTRG00000005855	SF3B3	100	91.947	Tursiops_truncatus
ENSXMAG00000006334	sf3b3	99	93.902	ENSUAMG00000006780	SF3B3	100	92.769	Ursus_americanus
ENSXMAG00000006334	sf3b3	99	93.902	ENSUMAG00000017757	SF3B3	100	92.769	Ursus_maritimus
ENSXMAG00000006334	sf3b3	100	77.732	ENSVPAG00000003202	SF3B3	100	77.732	Vicugna_pacos
ENSXMAG00000006334	sf3b3	99	93.902	ENSVVUG00000017922	SF3B3	100	92.769	Vulpes_vulpes
ENSXMAG00000006334	sf3b3	100	92.933	ENSXETG00000032869	SF3B3	100	92.933	Xenopus_tropicalis
ENSXMAG00000006334	sf3b3	95	100.000	ENSXCOG00000013628	sf3b3	97	100.000	Xiphophorus_couchianus