EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000006527 (Gene tree)
Gene ID: 102231406
Gene Symbol: -
Alias: -
Full Name: zinc finger protein Gfi-1b-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6553 bases
Position: chr5:8850867-8857419
Accession: 102231406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000006537	zf-C2H2	PF00096.26	2.6e-21	1	4
ENSXMAP00000006537	zf-C2H2	PF00096.26	2.6e-21	2	4
ENSXMAP00000006537	zf-C2H2	PF00096.26	2.6e-21	3	4
ENSXMAP00000006537	zf-C2H2	PF00096.26	2.6e-21	4	4
ENSXMAP00000006537	zf-met	PF12874.7	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000006545	-	1285	XM_014476154	ENSXMAP00000006537	309 (aa)	XP_014331640	M3ZWE3

Gene Model

Click here to download ENSXMAG00000006527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000006527	-	50	61.350	ENSAMEG00000013858	-	92	61.350	Ailuropoda_melanoleuca
ENSXMAG00000006527	-	58	65.138	ENSACIG00000002180	-	95	65.138	Amphilophus_citrinellus
ENSXMAG00000006527	-	94	41.196	ENSATEG00000009167	gfi1ab	68	41.196	Anabas_testudineus
ENSXMAG00000006527	-	51	60.714	ENSAPLG00000015700	GFI1	52	60.714	Anas_platyrhynchos
ENSXMAG00000006527	-	99	44.548	ENSAMXG00000015228	-	96	44.548	Astyanax_mexicanus
ENSXMAG00000006527	-	50	58.282	ENSAMXG00000006669	GFI1	52	58.282	Astyanax_mexicanus
ENSXMAG00000006527	-	65	51.887	ENSBTAG00000016723	GFI1	50	51.887	Bos_taurus
ENSXMAG00000006527	-	65	52.358	ENSCHIG00000016135	GFI1	50	52.358	Capra_hircus
ENSXMAG00000006527	-	50	80.556	ENSCAPG00000016268	-	95	80.556	Cavia_aperea
ENSXMAG00000006527	-	50	64.000	ENSCPBG00000015742	-	96	64.000	Chrysemys_picta_bellii
ENSXMAG00000006527	-	50	64.667	ENSCGRG00000013485	-	96	64.667	Cricetulus_griseus_crigri
ENSXMAG00000006527	-	60	54.359	ENSCSEG00000017729	GFI1	50	54.359	Cynoglossus_semilaevis
ENSXMAG00000006527	-	50	64.667	ENSDORG00000023443	-	96	64.667	Dipodomys_ordii
ENSXMAG00000006527	-	98	41.796	ENSEBUG00000008075	gfi1ab	98	41.796	Eptatretus_burgeri
ENSXMAG00000006527	-	58	55.208	ENSEEUG00000000198	GFI1	59	48.963	Erinaceus_europaeus
ENSXMAG00000006527	-	99	46.802	ENSELUG00000006948	-	100	47.353	Esox_lucius
ENSXMAG00000006527	-	50	64.667	ENSFDAG00000019296	-	96	64.667	Fukomys_damarensis
ENSXMAG00000006527	-	100	75.389	ENSFHEG00000002747	-	100	75.389	Fundulus_heteroclitus
ENSXMAG00000006527	-	68	51.351	ENSGMOG00000007737	gfi1ab	57	51.351	Gadus_morhua
ENSXMAG00000006527	-	50	64.000	ENSGAGG00000015899	GFI1	96	64.000	Gopherus_agassizii
ENSXMAG00000006527	-	50	61.350	ENSHCOG00000019555	GFI1	53	61.350	Hippocampus_comes
ENSXMAG00000006527	-	51	63.855	ENSIPUG00000021407	-	96	45.289	Ictalurus_punctatus
ENSXMAG00000006527	-	50	80.556	ENSJJAG00000022622	-	95	80.556	Jaculus_jaculus
ENSXMAG00000006527	-	99	40.060	ENSLACG00000017590	-	99	40.476	Latimeria_chalumnae
ENSXMAG00000006527	-	52	58.960	ENSLACG00000013362	GFI1	74	43.974	Latimeria_chalumnae
ENSXMAG00000006527	-	50	64.667	ENSMMUG00000005068	GFI1	96	64.667	Macaca_mulatta
ENSXMAG00000006527	-	58	56.316	ENSMAMG00000008125	gfi1ab	50	56.316	Mastacembelus_armatus
ENSXMAG00000006527	-	50	64.667	ENSMAUG00000021273	-	96	64.667	Mesocricetus_auratus
ENSXMAG00000006527	-	50	64.667	ENSMOCG00000004478	-	96	64.667	Microtus_ochrogaster
ENSXMAG00000006527	-	50	64.667	MGP_CAROLIEiJ_G0027508	Gfi1	96	64.667	Mus_caroli
ENSXMAG00000006527	-	50	64.667	MGP_PahariEiJ_G0017280	Gfi1	96	64.667	Mus_pahari
ENSXMAG00000006527	-	50	64.667	ENSNGAG00000002549	-	96	64.667	Nannospalax_galili
ENSXMAG00000006527	-	50	64.667	ENSODEG00000006410	-	96	64.667	Octodon_degus
ENSXMAG00000006527	-	50	65.132	ENSOANG00000022289	-	70	65.132	Ornithorhynchus_anatinus
ENSXMAG00000006527	-	50	61.350	ENSORLG00020002817	GFI1	50	61.350	Oryzias_latipes_hni
ENSXMAG00000006527	-	57	55.851	ENSOGAG00000027913	GFI1	54	55.851	Otolemur_garnettii
ENSXMAG00000006527	-	50	61.350	ENSPPAG00000042186	GFI1	50	61.350	Pan_paniscus
ENSXMAG00000006527	-	55	79.817	ENSPTIG00000002680	-	95	79.817	Panthera_tigris_altaica
ENSXMAG00000006527	-	51	60.714	ENSPSIG00000008734	GFI1	53	60.714	Pelodiscus_sinensis
ENSXMAG00000006527	-	98	40.854	ENSPMGG00000011041	GFI1	98	40.854	Periophthalmus_magnuspinnatus
ENSXMAG00000006527	-	100	93.548	ENSPFOG00000024581	-	100	93.548	Poecilia_formosa
ENSXMAG00000006527	-	50	61.963	ENSPLAG00000010879	gfi1ab	52	61.963	Poecilia_latipinna
ENSXMAG00000006527	-	51	80.531	ENSPNYG00000001775	-	88	80.531	Pundamilia_nyererei
ENSXMAG00000006527	-	99	43.260	ENSPNAG00000014299	-	96	43.260	Pygocentrus_nattereri
ENSXMAG00000006527	-	51	66.864	ENSSFOG00015008114	-	98	45.679	Scleropages_formosus
ENSXMAG00000006527	-	50	61.350	ENSSPAG00000009140	gfi1ab	54	61.350	Stegastes_partitus
ENSXMAG00000006527	-	65	51.887	ENSSSCG00000006902	GFI1	50	51.887	Sus_scrofa
ENSXMAG00000006527	-	51	60.714	ENSTGUG00000006060	GFI1	51	60.714	Taeniopygia_guttata
ENSXMAG00000006527	-	50	64.667	ENSUMAG00000011251	-	96	64.667	Ursus_maritimus
ENSXMAG00000006527	-	100	47.896	ENSXCOG00000013213	-	100	62.783	Xiphophorus_couchianus