EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000006634 (Gene tree)
Gene ID: 102231476
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 10134 bases
Position: chr2:22868014-22878147
Accession: 102231476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000006666	Snurportin1	PF11538.8	1.1e-16	1	1
ENSXMAP00000039887	Snurportin1	PF11538.8	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000006674	-	2770	XM_005816466	ENSXMAP00000006666	371 (aa)	XP_005816523	M3ZWS2
ENSXMAT00000025278	-	1119	-	ENSXMAP00000039887	372 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000006634's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000006634	snupn	94	64.507	ENSG00000169371	SNUPN	100	76.190	Homo_sapiens
ENSXMAG00000006634	snupn	100	89.544	ENSAPOG00000016953	snupn	100	89.544	Acanthochromis_polyacanthus
ENSXMAG00000006634	snupn	95	63.585	ENSAMEG00000008291	SNUPN	96	64.706	Ailuropoda_melanoleuca
ENSXMAG00000006634	snupn	100	86.863	ENSACIG00000012409	snupn	100	86.863	Amphilophus_citrinellus
ENSXMAG00000006634	snupn	100	88.740	ENSAOCG00000018096	snupn	100	88.740	Amphiprion_ocellaris
ENSXMAG00000006634	snupn	100	89.008	ENSAPEG00000008834	snupn	100	87.936	Amphiprion_percula
ENSXMAG00000006634	snupn	100	89.276	ENSATEG00000021019	snupn	100	89.276	Anabas_testudineus
ENSXMAG00000006634	snupn	95	65.254	ENSANAG00000025568	SNUPN	96	65.537	Aotus_nancymaae
ENSXMAG00000006634	snupn	100	85.255	ENSACLG00000025155	snupn	100	85.255	Astatotilapia_calliptera
ENSXMAG00000006634	snupn	98	77.961	ENSAMXG00000038311	snupn	100	75.477	Astyanax_mexicanus
ENSXMAG00000006634	snupn	95	64.624	ENSBTAG00000021293	SNUPN	96	64.525	Bos_taurus
ENSXMAG00000006634	snupn	87	42.813	WBGene00017746	F23F1.5	93	42.202	Caenorhabditis_elegans
ENSXMAG00000006634	snupn	94	65.429	ENSCJAG00000003005	SNUPN	95	65.429	Callithrix_jacchus
ENSXMAG00000006634	snupn	95	64.124	ENSCAFG00000018035	SNUPN	96	64.407	Canis_familiaris
ENSXMAG00000006634	snupn	95	63.231	ENSCHIG00000018047	SNUPN	96	63.687	Capra_hircus
ENSXMAG00000006634	snupn	95	63.687	ENSTSYG00000037224	SNUPN	96	63.966	Carlito_syrichta
ENSXMAG00000006634	snupn	94	58.708	ENSCAPG00000005061	SNUPN	95	58.592	Cavia_aperea
ENSXMAG00000006634	snupn	94	66.479	ENSCPOG00000034772	SNUPN	96	66.384	Cavia_porcellus
ENSXMAG00000006634	snupn	95	65.254	ENSCCAG00000016169	-	96	65.537	Cebus_capucinus
ENSXMAG00000006634	snupn	95	63.966	ENSCATG00000039783	SNUPN	96	64.246	Cercocebus_atys
ENSXMAG00000006634	snupn	94	64.773	ENSCLAG00000016968	SNUPN	95	65.722	Chinchilla_lanigera
ENSXMAG00000006634	snupn	95	63.966	ENSCSAG00000014576	-	86	64.246	Chlorocebus_sabaeus
ENSXMAG00000006634	snupn	95	63.128	ENSCSAG00000019246	-	96	63.408	Chlorocebus_sabaeus
ENSXMAG00000006634	snupn	94	50.282	ENSCHOG00000005403	SNUPN	95	51.412	Choloepus_hoffmanni
ENSXMAG00000006634	snupn	94	66.667	ENSCPBG00000022172	SNUPN	91	65.470	Chrysemys_picta_bellii
ENSXMAG00000006634	snupn	95	64.246	ENSCANG00000029707	SNUPN	96	64.525	Colobus_angolensis_palliatus
ENSXMAG00000006634	snupn	95	64.525	ENSCGRG00001004622	Snupn	97	64.426	Cricetulus_griseus_chok1gshd
ENSXMAG00000006634	snupn	95	64.525	ENSCGRG00000002515	Snupn	97	64.426	Cricetulus_griseus_crigri
ENSXMAG00000006634	snupn	100	80.697	ENSCSEG00000003160	snupn	89	80.161	Cynoglossus_semilaevis
ENSXMAG00000006634	snupn	100	87.634	ENSCVAG00000010502	snupn	100	86.792	Cyprinodon_variegatus
ENSXMAG00000006634	snupn	99	73.585	ENSDARG00000008395	snupn	99	73.514	Danio_rerio
ENSXMAG00000006634	snupn	94	62.000	ENSDNOG00000044304	SNUPN	90	63.143	Dasypus_novemcinctus
ENSXMAG00000006634	snupn	95	63.788	ENSDORG00000009051	Snupn	96	62.912	Dipodomys_ordii
ENSXMAG00000006634	snupn	94	55.241	ENSETEG00000013792	SNUPN	81	67.925	Echinops_telfairi
ENSXMAG00000006634	snupn	96	54.178	ENSEBUG00000006682	snupn	96	53.743	Eptatretus_burgeri
ENSXMAG00000006634	snupn	95	63.966	ENSEASG00005015697	SNUPN	93	64.804	Equus_asinus_asinus
ENSXMAG00000006634	snupn	94	64.407	ENSECAG00000017726	SNUPN	95	65.254	Equus_caballus
ENSXMAG00000006634	snupn	66	63.128	ENSEEUG00000000981	-	66	65.363	Erinaceus_europaeus
ENSXMAG00000006634	snupn	99	75.844	ENSELUG00000023305	snupn	99	76.623	Esox_lucius
ENSXMAG00000006634	snupn	95	64.146	ENSFCAG00000040981	SNUPN	96	65.266	Felis_catus
ENSXMAG00000006634	snupn	94	66.384	ENSFDAG00000011599	SNUPN	96	66.006	Fukomys_damarensis
ENSXMAG00000006634	snupn	100	91.689	ENSFHEG00000017627	snupn	100	90.617	Fundulus_heteroclitus
ENSXMAG00000006634	snupn	94	80.516	ENSGMOG00000009272	snupn	100	82.521	Gadus_morhua
ENSXMAG00000006634	snupn	89	63.529	ENSGALG00000029537	SNUPN	95	61.732	Gallus_gallus
ENSXMAG00000006634	snupn	100	97.043	ENSGAFG00000004954	snupn	100	97.043	Gambusia_affinis
ENSXMAG00000006634	snupn	94	89.655	ENSGACG00000007450	snupn	100	89.655	Gasterosteus_aculeatus
ENSXMAG00000006634	snupn	94	65.826	ENSGAGG00000022470	SNUPN	95	64.560	Gopherus_agassizii
ENSXMAG00000006634	snupn	54	66.667	ENSGGOG00000004581	-	92	66.667	Gorilla_gorilla
ENSXMAG00000006634	snupn	100	85.791	ENSHBUG00000006950	snupn	100	85.791	Haplochromis_burtoni
ENSXMAG00000006634	snupn	94	64.873	ENSHGLG00000000536	SNUPN	96	65.722	Heterocephalus_glaber_female
ENSXMAG00000006634	snupn	94	64.873	ENSHGLG00100016161	SNUPN	96	65.722	Heterocephalus_glaber_male
ENSXMAG00000006634	snupn	99	81.963	ENSHCOG00000007262	snupn	99	82.493	Hippocampus_comes
ENSXMAG00000006634	snupn	98	76.860	ENSIPUG00000014460	Snupn	97	76.420	Ictalurus_punctatus
ENSXMAG00000006634	snupn	94	64.023	ENSSTOG00000005904	SNUPN	95	64.873	Ictidomys_tridecemlineatus
ENSXMAG00000006634	snupn	100	80.863	ENSKMAG00000009957	snupn	100	79.784	Kryptolebias_marmoratus
ENSXMAG00000006634	snupn	100	86.772	ENSLBEG00000020694	snupn	100	86.508	Labrus_bergylta
ENSXMAG00000006634	snupn	96	64.525	ENSLACG00000015801	SNUPN	97	64.246	Latimeria_chalumnae
ENSXMAG00000006634	snupn	94	79.202	ENSLOCG00000015064	snupn	98	75.691	Lepisosteus_oculatus
ENSXMAG00000006634	snupn	95	64.246	ENSLAFG00000004422	SNUPN	96	64.804	Loxodonta_africana
ENSXMAG00000006634	snupn	67	76.389	ENSMFAG00000003706	SNUPN	95	62.360	Macaca_fascicularis
ENSXMAG00000006634	snupn	95	64.246	ENSMMUG00000004784	SNUPN	96	64.525	Macaca_mulatta
ENSXMAG00000006634	snupn	95	59.777	ENSMLEG00000041966	SNUPN	96	59.777	Mandrillus_leucophaeus
ENSXMAG00000006634	snupn	100	89.008	ENSMAMG00000023109	snupn	100	89.008	Mastacembelus_armatus
ENSXMAG00000006634	snupn	100	85.523	ENSMZEG00005010806	snupn	100	85.523	Maylandia_zebra
ENSXMAG00000006634	snupn	95	64.525	ENSMAUG00000020426	Snupn	97	64.986	Mesocricetus_auratus
ENSXMAG00000006634	snupn	95	64.345	ENSMICG00000016438	SNUPN	96	64.525	Microcebus_murinus
ENSXMAG00000006634	snupn	95	64.804	ENSMOCG00000014238	Snupn	97	64.706	Microtus_ochrogaster
ENSXMAG00000006634	snupn	100	88.770	ENSMMOG00000001321	snupn	100	87.668	Mola_mola
ENSXMAG00000006634	snupn	94	64.444	ENSMODG00000008852	SNUPN	95	62.707	Monodelphis_domestica
ENSXMAG00000006634	snupn	100	83.558	ENSMALG00000015058	snupn	100	83.558	Monopterus_albus
ENSXMAG00000006634	snupn	94	65.537	MGP_CAROLIEiJ_G0032259	Snupn	96	65.722	Mus_caroli
ENSXMAG00000006634	snupn	94	65.254	ENSMUSG00000055334	Snupn	96	65.439	Mus_musculus
ENSXMAG00000006634	snupn	95	65.084	MGP_PahariEiJ_G0015126	Snupn	97	65.266	Mus_pahari
ENSXMAG00000006634	snupn	94	65.254	MGP_SPRETEiJ_G0033399	Snupn	96	65.439	Mus_spretus
ENSXMAG00000006634	snupn	95	62.745	ENSMPUG00000017324	SNUPN	96	63.866	Mustela_putorius_furo
ENSXMAG00000006634	snupn	95	60.167	ENSMLUG00000027485	-	96	60.167	Myotis_lucifugus
ENSXMAG00000006634	snupn	95	63.611	ENSMLUG00000027517	-	96	63.187	Myotis_lucifugus
ENSXMAG00000006634	snupn	94	54.062	ENSMLUG00000000038	-	99	54.494	Myotis_lucifugus
ENSXMAG00000006634	snupn	95	63.866	ENSNGAG00000018735	Snupn	96	63.989	Nannospalax_galili
ENSXMAG00000006634	snupn	100	86.059	ENSNBRG00000017919	snupn	100	86.059	Neolamprologus_brichardi
ENSXMAG00000006634	snupn	63	75.000	ENSNLEG00000035240	-	78	75.000	Nomascus_leucogenys
ENSXMAG00000006634	snupn	95	53.631	ENSOPRG00000015889	-	96	53.911	Ochotona_princeps
ENSXMAG00000006634	snupn	88	54.079	ENSODEG00000014491	SNUPN	94	54.518	Octodon_degus
ENSXMAG00000006634	snupn	97	87.328	ENSONIG00000012855	snupn	99	87.328	Oreochromis_niloticus
ENSXMAG00000006634	snupn	95	64.525	ENSOCUG00000008801	SNUPN	96	65.000	Oryctolagus_cuniculus
ENSXMAG00000006634	snupn	100	82.306	ENSORLG00000001836	snupn	100	83.646	Oryzias_latipes
ENSXMAG00000006634	snupn	99	83.333	ENSORLG00020021175	snupn	99	83.333	Oryzias_latipes_hni
ENSXMAG00000006634	snupn	100	83.378	ENSORLG00015014444	snupn	99	83.378	Oryzias_latipes_hsok
ENSXMAG00000006634	snupn	100	84.182	ENSOMEG00000004853	snupn	100	84.182	Oryzias_melastigma
ENSXMAG00000006634	snupn	95	62.117	ENSOGAG00000004915	SNUPN	96	63.231	Otolemur_garnettii
ENSXMAG00000006634	snupn	95	63.510	ENSOARG00000001991	SNUPN	93	63.966	Ovis_aries
ENSXMAG00000006634	snupn	94	64.789	ENSPPAG00000034351	SNUPN	95	64.972	Pan_paniscus
ENSXMAG00000006634	snupn	95	64.146	ENSPPRG00000023192	SNUPN	96	65.266	Panthera_pardus
ENSXMAG00000006634	snupn	95	64.146	ENSPTIG00000003528	SNUPN	96	65.266	Panthera_tigris_altaica
ENSXMAG00000006634	snupn	94	64.789	ENSPTRG00000007302	SNUPN	95	64.972	Pan_troglodytes
ENSXMAG00000006634	snupn	95	55.866	ENSPANG00000034514	SNUPN	96	56.145	Papio_anubis
ENSXMAG00000006634	snupn	94	76.724	ENSPKIG00000012444	snupn	95	75.499	Paramormyrops_kingsleyae
ENSXMAG00000006634	snupn	94	65.738	ENSPSIG00000015229	SNUPN	95	64.641	Pelodiscus_sinensis
ENSXMAG00000006634	snupn	94	78.933	ENSPMGG00000023843	snupn	95	79.494	Periophthalmus_magnuspinnatus
ENSXMAG00000006634	snupn	94	64.689	ENSPCIG00000007854	SNUPN	95	63.456	Phascolarctos_cinereus
ENSXMAG00000006634	snupn	100	98.113	ENSPFOG00000014221	snupn	99	98.113	Poecilia_formosa
ENSXMAG00000006634	snupn	100	98.383	ENSPLAG00000002339	snupn	99	98.383	Poecilia_latipinna
ENSXMAG00000006634	snupn	100	98.113	ENSPMEG00000012436	snupn	99	98.113	Poecilia_mexicana
ENSXMAG00000006634	snupn	100	98.113	ENSPREG00000012683	snupn	99	98.113	Poecilia_reticulata
ENSXMAG00000006634	snupn	94	56.901	ENSPPYG00000006663	SNUPN	94	57.062	Pongo_abelii
ENSXMAG00000006634	snupn	94	64.124	ENSPCOG00000025482	SNUPN	95	64.873	Propithecus_coquereli
ENSXMAG00000006634	snupn	94	64.407	ENSPVAG00000010035	SNUPN	96	62.983	Pteropus_vampyrus
ENSXMAG00000006634	snupn	100	85.791	ENSPNYG00000008752	snupn	100	85.791	Pundamilia_nyererei
ENSXMAG00000006634	snupn	94	81.375	ENSPNAG00000026875	snupn	97	78.977	Pygocentrus_nattereri
ENSXMAG00000006634	snupn	95	65.084	ENSRNOG00000005426	Snupn	97	65.266	Rattus_norvegicus
ENSXMAG00000006634	snupn	95	64.246	ENSRBIG00000038665	SNUPN	96	64.525	Rhinopithecus_bieti
ENSXMAG00000006634	snupn	95	64.246	ENSRROG00000043625	SNUPN	96	64.525	Rhinopithecus_roxellana
ENSXMAG00000006634	snupn	95	65.537	ENSSBOG00000029086	-	96	65.819	Saimiri_boliviensis_boliviensis
ENSXMAG00000006634	snupn	89	81.928	ENSSFOG00015022264	snupn	66	80.665	Scleropages_formosus
ENSXMAG00000006634	snupn	99	88.978	ENSSMAG00000005485	snupn	99	88.978	Scophthalmus_maximus
ENSXMAG00000006634	snupn	100	90.349	ENSSDUG00000023461	snupn	100	90.349	Seriola_dumerili
ENSXMAG00000006634	snupn	100	90.323	ENSSLDG00000001425	snupn	100	89.785	Seriola_lalandi_dorsalis
ENSXMAG00000006634	snupn	94	53.107	ENSSARG00000005585	SNUPN	94	54.237	Sorex_araneus
ENSXMAG00000006634	snupn	94	65.449	ENSSPUG00000014331	SNUPN	95	65.449	Sphenodon_punctatus
ENSXMAG00000006634	snupn	100	89.276	ENSSPAG00000001216	snupn	100	89.276	Stegastes_partitus
ENSXMAG00000006634	snupn	95	64.345	ENSSSCG00000001877	SNUPN	96	64.525	Sus_scrofa
ENSXMAG00000006634	snupn	100	84.450	ENSTRUG00000016085	snupn	98	84.450	Takifugu_rubripes
ENSXMAG00000006634	snupn	93	70.904	ENSTNIG00000008456	snupn	100	71.186	Tetraodon_nigroviridis
ENSXMAG00000006634	snupn	95	64.067	ENSTBEG00000002434	SNUPN	96	63.361	Tupaia_belangeri
ENSXMAG00000006634	snupn	95	59.610	ENSTTRG00000011484	SNUPN	96	59.497	Tursiops_truncatus
ENSXMAG00000006634	snupn	95	63.585	ENSUAMG00000022723	SNUPN	96	64.706	Ursus_americanus
ENSXMAG00000006634	snupn	95	63.866	ENSUMAG00000003738	SNUPN	96	64.986	Ursus_maritimus
ENSXMAG00000006634	snupn	95	63.662	ENSVVUG00000019574	SNUPN	96	64.124	Vulpes_vulpes
ENSXMAG00000006634	snupn	94	66.000	ENSXETG00000015280	snupn	99	66.476	Xenopus_tropicalis