EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000006697 (Gene tree)
Gene ID: 102227683
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6489 bases
Position: chr17:14655128-14661616
Accession: 102227683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000006726	tRNA_Me_trans	PF03054.16	8.8e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000006734	-	3685	XM_005801218	ENSXMAP00000006726	416 (aa)	XP_005801275	M3ZWY2

Gene Model

Click here to download ENSXMAG00000006697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000006697	trmu	99	70.433	ENSG00000100416	TRMU	96	76.730	Homo_sapiens
ENSXMAG00000006697	trmu	99	88.702	ENSAPOG00000014458	trmu	99	88.702	Acanthochromis_polyacanthus
ENSXMAG00000006697	trmu	95	73.671	ENSAMEG00000003319	TRMU	95	73.671	Ailuropoda_melanoleuca
ENSXMAG00000006697	trmu	99	87.440	ENSACIG00000002101	trmu	99	87.440	Amphilophus_citrinellus
ENSXMAG00000006697	trmu	99	89.639	ENSAOCG00000013155	trmu	99	89.639	Amphiprion_ocellaris
ENSXMAG00000006697	trmu	99	89.398	ENSAPEG00000013350	trmu	99	89.398	Amphiprion_percula
ENSXMAG00000006697	trmu	99	86.341	ENSATEG00000007814	trmu	99	86.341	Anabas_testudineus
ENSXMAG00000006697	trmu	93	73.196	ENSAPLG00000016380	TRMU	99	73.196	Anas_platyrhynchos
ENSXMAG00000006697	trmu	99	71.602	ENSACAG00000007720	TRMU	99	71.602	Anolis_carolinensis
ENSXMAG00000006697	trmu	99	70.803	ENSANAG00000038053	TRMU	97	70.803	Aotus_nancymaae
ENSXMAG00000006697	trmu	99	88.406	ENSACLG00000005395	trmu	98	89.702	Astatotilapia_calliptera
ENSXMAG00000006697	trmu	99	79.512	ENSAMXG00000005282	trmu	99	79.512	Astyanax_mexicanus
ENSXMAG00000006697	trmu	99	71.154	ENSBTAG00000005595	TRMU	99	71.154	Bos_taurus
ENSXMAG00000006697	trmu	91	41.388	WBGene00007114	mttu-1	98	41.388	Caenorhabditis_elegans
ENSXMAG00000006697	trmu	99	68.916	ENSCJAG00000000198	TRMU	99	68.916	Callithrix_jacchus
ENSXMAG00000006697	trmu	96	72.932	ENSCAFG00000000779	TRMU	98	70.913	Canis_familiaris
ENSXMAG00000006697	trmu	96	72.932	ENSCAFG00020009184	TRMU	98	70.913	Canis_lupus_dingo
ENSXMAG00000006697	trmu	100	70.743	ENSCHIG00000017074	TRMU	99	70.913	Capra_hircus
ENSXMAG00000006697	trmu	96	72.682	ENSTSYG00000003853	TRMU	95	72.682	Carlito_syrichta
ENSXMAG00000006697	trmu	93	68.227	ENSCAPG00000013034	TRMU	95	68.227	Cavia_aperea
ENSXMAG00000006697	trmu	97	72.388	ENSCPOG00000020780	TRMU	95	72.388	Cavia_porcellus
ENSXMAG00000006697	trmu	96	71.429	ENSCCAG00000021641	TRMU	95	71.429	Cebus_capucinus
ENSXMAG00000006697	trmu	99	70.120	ENSCATG00000032800	TRMU	97	70.120	Cercocebus_atys
ENSXMAG00000006697	trmu	100	70.433	ENSCLAG00000017269	TRMU	99	70.433	Chinchilla_lanigera
ENSXMAG00000006697	trmu	96	72.180	ENSCSAG00000005279	TRMU	95	72.180	Chlorocebus_sabaeus
ENSXMAG00000006697	trmu	92	71.875	ENSCPBG00000011621	TRMU	96	71.875	Chrysemys_picta_bellii
ENSXMAG00000006697	trmu	94	48.223	ENSCING00000019371	-	96	48.223	Ciona_intestinalis
ENSXMAG00000006697	trmu	96	71.429	ENSCANG00000041645	TRMU	95	71.429	Colobus_angolensis_palliatus
ENSXMAG00000006697	trmu	96	71.429	ENSCGRG00001001739	Trmu	95	71.429	Cricetulus_griseus_chok1gshd
ENSXMAG00000006697	trmu	96	66.416	ENSCGRG00000002781	Trmu	95	66.416	Cricetulus_griseus_crigri
ENSXMAG00000006697	trmu	100	80.529	ENSCSEG00000012382	trmu	100	80.529	Cynoglossus_semilaevis
ENSXMAG00000006697	trmu	99	93.012	ENSCVAG00000001366	trmu	99	93.012	Cyprinodon_variegatus
ENSXMAG00000006697	trmu	99	75.604	ENSDARG00000043734	trmu	99	75.604	Danio_rerio
ENSXMAG00000006697	trmu	61	58.824	ENSDNOG00000047245	-	95	56.827	Dasypus_novemcinctus
ENSXMAG00000006697	trmu	96	72.180	ENSDORG00000007455	Trmu	97	72.180	Dipodomys_ordii
ENSXMAG00000006697	trmu	93	43.782	FBgn0040337	CG3021	95	43.782	Drosophila_melanogaster
ENSXMAG00000006697	trmu	94	56.489	ENSEBUG00000007454	trmu	100	55.043	Eptatretus_burgeri
ENSXMAG00000006697	trmu	96	73.183	ENSEASG00005021725	TRMU	95	73.183	Equus_asinus_asinus
ENSXMAG00000006697	trmu	96	73.183	ENSECAG00000000467	TRMU	95	73.183	Equus_caballus
ENSXMAG00000006697	trmu	71	52.667	ENSEEUG00000000074	-	72	52.667	Erinaceus_europaeus
ENSXMAG00000006697	trmu	99	79.808	ENSELUG00000009464	trmu	99	81.793	Esox_lucius
ENSXMAG00000006697	trmu	96	73.434	ENSFCAG00000006533	TRMU	95	73.434	Felis_catus
ENSXMAG00000006697	trmu	93	71.717	ENSFALG00000010035	TRMU	99	71.717	Ficedula_albicollis
ENSXMAG00000006697	trmu	93	68.814	ENSFDAG00000017472	TRMU	99	68.814	Fukomys_damarensis
ENSXMAG00000006697	trmu	99	92.048	ENSFHEG00000003162	trmu	98	93.460	Fundulus_heteroclitus
ENSXMAG00000006697	trmu	97	72.414	ENSGMOG00000001323	trmu	99	72.414	Gadus_morhua
ENSXMAG00000006697	trmu	99	72.792	ENSGALG00000031922	TRMU	99	72.792	Gallus_gallus
ENSXMAG00000006697	trmu	98	97.555	ENSGAFG00000013331	trmu	98	97.555	Gambusia_affinis
ENSXMAG00000006697	trmu	99	82.938	ENSGACG00000019024	trmu	99	82.938	Gasterosteus_aculeatus
ENSXMAG00000006697	trmu	99	70.433	ENSGGOG00000000203	TRMU	99	70.433	Gorilla_gorilla
ENSXMAG00000006697	trmu	99	87.923	ENSHBUG00000023421	trmu	98	89.160	Haplochromis_burtoni
ENSXMAG00000006697	trmu	99	69.231	ENSHGLG00000009278	TRMU	99	69.231	Heterocephalus_glaber_female
ENSXMAG00000006697	trmu	99	69.231	ENSHGLG00100018863	TRMU	99	69.231	Heterocephalus_glaber_male
ENSXMAG00000006697	trmu	99	85.542	ENSHCOG00000013459	trmu	99	85.542	Hippocampus_comes
ENSXMAG00000006697	trmu	96	81.203	ENSIPUG00000009785	trmu	98	81.203	Ictalurus_punctatus
ENSXMAG00000006697	trmu	99	70.673	ENSSTOG00000010993	TRMU	99	70.673	Ictidomys_tridecemlineatus
ENSXMAG00000006697	trmu	97	71.393	ENSJJAG00000000667	Trmu	96	71.393	Jaculus_jaculus
ENSXMAG00000006697	trmu	99	85.542	ENSKMAG00000008516	trmu	99	85.542	Kryptolebias_marmoratus
ENSXMAG00000006697	trmu	99	84.819	ENSLBEG00000018831	trmu	99	84.819	Labrus_bergylta
ENSXMAG00000006697	trmu	98	74.155	ENSLACG00000013713	TRMU	99	74.155	Latimeria_chalumnae
ENSXMAG00000006697	trmu	99	78.606	ENSLOCG00000016066	trmu	99	78.606	Lepisosteus_oculatus
ENSXMAG00000006697	trmu	96	62.935	ENSLAFG00000005129	TRMU	96	62.935	Loxodonta_africana
ENSXMAG00000006697	trmu	96	72.431	ENSMFAG00000039767	TRMU	95	72.431	Macaca_fascicularis
ENSXMAG00000006697	trmu	96	72.431	ENSMMUG00000000807	TRMU	95	72.431	Macaca_mulatta
ENSXMAG00000006697	trmu	96	72.431	ENSMNEG00000028164	TRMU	95	72.431	Macaca_nemestrina
ENSXMAG00000006697	trmu	99	70.120	ENSMLEG00000033884	TRMU	97	70.120	Mandrillus_leucophaeus
ENSXMAG00000006697	trmu	99	85.024	ENSMAMG00000004717	trmu	99	85.024	Mastacembelus_armatus
ENSXMAG00000006697	trmu	99	88.406	ENSMZEG00005015797	trmu	99	88.406	Maylandia_zebra
ENSXMAG00000006697	trmu	80	71.053	ENSMGAG00000007550	TRMU	99	71.053	Meleagris_gallopavo
ENSXMAG00000006697	trmu	96	71.429	ENSMAUG00000022282	Trmu	96	71.429	Mesocricetus_auratus
ENSXMAG00000006697	trmu	96	71.930	ENSMICG00000029046	TRMU	97	71.930	Microcebus_murinus
ENSXMAG00000006697	trmu	96	71.178	ENSMOCG00000014641	Trmu	96	71.178	Microtus_ochrogaster
ENSXMAG00000006697	trmu	99	84.019	ENSMMOG00000007229	trmu	99	84.019	Mola_mola
ENSXMAG00000006697	trmu	98	67.482	ENSMODG00000007433	TRMU	96	67.482	Monodelphis_domestica
ENSXMAG00000006697	trmu	99	85.060	ENSMALG00000007721	trmu	99	85.060	Monopterus_albus
ENSXMAG00000006697	trmu	98	69.193	MGP_CAROLIEiJ_G0020134	Trmu	98	69.193	Mus_caroli
ENSXMAG00000006697	trmu	99	69.586	ENSMUSG00000022386	Trmu	99	69.586	Mus_musculus
ENSXMAG00000006697	trmu	99	69.343	MGP_PahariEiJ_G0020139	Trmu	99	69.343	Mus_pahari
ENSXMAG00000006697	trmu	99	69.586	MGP_SPRETEiJ_G0021031	Trmu	99	69.586	Mus_spretus
ENSXMAG00000006697	trmu	99	70.433	ENSMPUG00000002523	TRMU	99	70.433	Mustela_putorius_furo
ENSXMAG00000006697	trmu	99	70.773	ENSNGAG00000005132	Trmu	99	70.773	Nannospalax_galili
ENSXMAG00000006697	trmu	99	88.406	ENSNBRG00000022690	trmu	99	90.000	Neolamprologus_brichardi
ENSXMAG00000006697	trmu	99	70.673	ENSNLEG00000015773	TRMU	99	70.673	Nomascus_leucogenys
ENSXMAG00000006697	trmu	79	60.245	ENSMEUG00000000216	TRMU	99	60.245	Notamacropus_eugenii
ENSXMAG00000006697	trmu	100	69.952	ENSODEG00000014745	TRMU	99	69.952	Octodon_degus
ENSXMAG00000006697	trmu	99	88.164	ENSONIG00000009821	trmu	99	88.164	Oreochromis_niloticus
ENSXMAG00000006697	trmu	94	67.008	ENSOANG00000001891	TRMU	99	67.008	Ornithorhynchus_anatinus
ENSXMAG00000006697	trmu	89	72.312	ENSOCUG00000003664	TRMU	93	71.026	Oryctolagus_cuniculus
ENSXMAG00000006697	trmu	99	82.892	ENSORLG00000019015	trmu	99	82.892	Oryzias_latipes
ENSXMAG00000006697	trmu	99	83.373	ENSORLG00020006830	trmu	99	83.373	Oryzias_latipes_hni
ENSXMAG00000006697	trmu	99	83.373	ENSORLG00015003907	trmu	99	83.373	Oryzias_latipes_hsok
ENSXMAG00000006697	trmu	60	83.468	ENSOMEG00000015541	trmu	90	83.468	Oryzias_melastigma
ENSXMAG00000006697	trmu	99	69.784	ENSOGAG00000008096	TRMU	100	69.784	Otolemur_garnettii
ENSXMAG00000006697	trmu	91	69.474	ENSOARG00000019475	TRMU	93	69.474	Ovis_aries
ENSXMAG00000006697	trmu	99	70.433	ENSPPAG00000033944	TRMU	99	70.433	Pan_paniscus
ENSXMAG00000006697	trmu	96	73.434	ENSPPRG00000004197	TRMU	98	71.394	Panthera_pardus
ENSXMAG00000006697	trmu	67	73.285	ENSPTIG00000014122	TRMU	97	75.000	Panthera_tigris_altaica
ENSXMAG00000006697	trmu	99	70.433	ENSPTRG00000014510	TRMU	99	70.433	Pan_troglodytes
ENSXMAG00000006697	trmu	100	69.712	ENSPANG00000023074	TRMU	97	69.589	Papio_anubis
ENSXMAG00000006697	trmu	99	77.427	ENSPKIG00000002849	trmu	99	77.427	Paramormyrops_kingsleyae
ENSXMAG00000006697	trmu	88	73.901	ENSPSIG00000013020	TRMU	95	73.901	Pelodiscus_sinensis
ENSXMAG00000006697	trmu	99	83.816	ENSPMGG00000004083	trmu	99	83.816	Periophthalmus_magnuspinnatus
ENSXMAG00000006697	trmu	96	71.178	ENSPEMG00000014007	Trmu	96	71.178	Peromyscus_maniculatus_bairdii
ENSXMAG00000006697	trmu	94	68.286	ENSPCIG00000009923	TRMU	95	66.584	Phascolarctos_cinereus
ENSXMAG00000006697	trmu	98	92.857	ENSPFOG00000008197	trmu	91	92.857	Poecilia_formosa
ENSXMAG00000006697	trmu	100	96.394	ENSPLAG00000008414	trmu	100	96.394	Poecilia_latipinna
ENSXMAG00000006697	trmu	99	96.386	ENSPMEG00000004326	trmu	99	96.386	Poecilia_mexicana
ENSXMAG00000006697	trmu	100	97.115	ENSPREG00000007980	trmu	100	97.115	Poecilia_reticulata
ENSXMAG00000006697	trmu	99	70.913	ENSPPYG00000011949	TRMU	99	70.913	Pongo_abelii
ENSXMAG00000006697	trmu	93	62.887	ENSPCAG00000013462	TRMU	99	62.887	Procavia_capensis
ENSXMAG00000006697	trmu	96	71.178	ENSPCOG00000016539	TRMU	96	71.178	Propithecus_coquereli
ENSXMAG00000006697	trmu	96	66.917	ENSPVAG00000013202	TRMU	99	65.385	Pteropus_vampyrus
ENSXMAG00000006697	trmu	99	87.923	ENSPNYG00000005629	trmu	99	87.923	Pundamilia_nyererei
ENSXMAG00000006697	trmu	98	79.462	ENSPNAG00000006339	trmu	96	79.462	Pygocentrus_nattereri
ENSXMAG00000006697	trmu	96	70.927	ENSRNOG00000016465	Trmu	96	70.927	Rattus_norvegicus
ENSXMAG00000006697	trmu	96	71.178	ENSRBIG00000038973	TRMU	99	68.000	Rhinopithecus_bieti
ENSXMAG00000006697	trmu	96	71.429	ENSRROG00000004267	TRMU	99	68.000	Rhinopithecus_roxellana
ENSXMAG00000006697	trmu	91	33.915	YDL033C	SLM3	91	33.915	Saccharomyces_cerevisiae
ENSXMAG00000006697	trmu	99	69.880	ENSSBOG00000030184	TRMU	99	69.880	Saimiri_boliviensis_boliviensis
ENSXMAG00000006697	trmu	92	75.066	ENSSFOG00015020664	trmu	100	75.066	Scleropages_formosus
ENSXMAG00000006697	trmu	99	84.504	ENSSMAG00000019450	trmu	99	84.504	Scophthalmus_maximus
ENSXMAG00000006697	trmu	99	87.952	ENSSDUG00000011913	trmu	99	87.952	Seriola_dumerili
ENSXMAG00000006697	trmu	99	87.711	ENSSLDG00000011684	trmu	99	87.711	Seriola_lalandi_dorsalis
ENSXMAG00000006697	trmu	98	61.275	ENSSPUG00000017123	TRMU	95	61.275	Sphenodon_punctatus
ENSXMAG00000006697	trmu	99	85.542	ENSSPAG00000021875	trmu	99	85.542	Stegastes_partitus
ENSXMAG00000006697	trmu	96	71.679	ENSSSCG00000000007	TRMU	99	69.451	Sus_scrofa
ENSXMAG00000006697	trmu	89	75.335	ENSTGUG00000003663	-	100	75.335	Taeniopygia_guttata
ENSXMAG00000006697	trmu	97	86.567	ENSTRUG00000001231	trmu	97	86.567	Takifugu_rubripes
ENSXMAG00000006697	trmu	99	84.412	ENSTNIG00000010484	trmu	98	84.412	Tetraodon_nigroviridis
ENSXMAG00000006697	trmu	72	56.667	ENSTBEG00000011276	-	77	56.667	Tupaia_belangeri
ENSXMAG00000006697	trmu	96	73.183	ENSTTRG00000004160	TRMU	95	73.183	Tursiops_truncatus
ENSXMAG00000006697	trmu	70	74.658	ENSUAMG00000024825	TRMU	97	74.658	Ursus_americanus
ENSXMAG00000006697	trmu	98	60.147	ENSUMAG00000019079	TRMU	97	74.319	Ursus_maritimus
ENSXMAG00000006697	trmu	53	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSXMAG00000006697	trmu	99	70.192	ENSVVUG00000024963	TRMU	99	70.192	Vulpes_vulpes
ENSXMAG00000006697	trmu	99	73.430	ENSXETG00000023304	trmu	97	73.430	Xenopus_tropicalis
ENSXMAG00000006697	trmu	100	96.897	ENSXCOG00000015105	trmu	100	96.897	Xiphophorus_couchianus