EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000006945 (Gene tree)
Gene ID: 102227378
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 7008 bases
Position: chr6:5928039-5935046
Accession: 102227378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025171	MMR_HSR1	PF01926.23	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000006981	-	546	-	ENSXMAP00000006973	181 (aa)	-	M3ZXM9
ENSXMAT00000037657	-	3049	XM_005813490	ENSXMAP00000025171	205 (aa)	XP_005813547	UPI0003B5C6DF

Gene Model

Click here to download ENSXMAG00000006945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000006945	rab18b	99	85.366	ENSG00000099246	RAB18	99	85.714	Homo_sapiens
ENSXMAG00000006945	rab18b	100	93.171	ENSAPOG00000019881	rab18b	100	93.171	Acanthochromis_polyacanthus
ENSXMAG00000006945	rab18b	99	74.468	ENSAMEG00000015990	RAB18	99	74.468	Ailuropoda_melanoleuca
ENSXMAG00000006945	rab18b	100	93.659	ENSACIG00000008102	rab18b	100	93.659	Amphilophus_citrinellus
ENSXMAG00000006945	rab18b	100	92.683	ENSAOCG00000013479	rab18b	100	92.683	Amphiprion_ocellaris
ENSXMAG00000006945	rab18b	100	92.195	ENSAPEG00000022923	rab18b	100	92.195	Amphiprion_percula
ENSXMAG00000006945	rab18b	99	91.176	ENSATEG00000002952	rab18b	99	91.176	Anabas_testudineus
ENSXMAG00000006945	rab18b	99	85.366	ENSANAG00000035856	RAB18	99	85.366	Aotus_nancymaae
ENSXMAG00000006945	rab18b	100	93.171	ENSACLG00000015289	rab18b	100	93.171	Astatotilapia_calliptera
ENSXMAG00000006945	rab18b	99	86.275	ENSAMXG00000042073	rab18b	99	86.275	Astyanax_mexicanus
ENSXMAG00000006945	rab18b	99	85.366	ENSBTAG00000009871	RAB18	88	85.366	Bos_taurus
ENSXMAG00000006945	rab18b	99	84.390	ENSBTAG00000050873	-	99	83.902	Bos_taurus
ENSXMAG00000006945	rab18b	99	85.366	ENSCJAG00000045749	RAB18	99	85.366	Callithrix_jacchus
ENSXMAG00000006945	rab18b	99	85.366	ENSCAFG00020003253	RAB18	99	85.366	Canis_lupus_dingo
ENSXMAG00000006945	rab18b	99	85.366	ENSCHIG00000008749	RAB18	99	85.366	Capra_hircus
ENSXMAG00000006945	rab18b	99	84.878	ENSTSYG00000013092	RAB18	99	84.878	Carlito_syrichta
ENSXMAG00000006945	rab18b	99	85.366	ENSCPOG00000032827	RAB18	99	84.878	Cavia_porcellus
ENSXMAG00000006945	rab18b	99	85.366	ENSCCAG00000006762	RAB18	99	85.366	Cebus_capucinus
ENSXMAG00000006945	rab18b	99	85.366	ENSCATG00000009672	RAB18	99	85.366	Cercocebus_atys
ENSXMAG00000006945	rab18b	99	85.366	ENSCSAG00000011749	RAB18	99	85.366	Chlorocebus_sabaeus
ENSXMAG00000006945	rab18b	99	85.366	ENSCANG00000035397	RAB18	99	85.366	Colobus_angolensis_palliatus
ENSXMAG00000006945	rab18b	99	85.366	ENSCGRG00001017519	Rab18	99	84.878	Cricetulus_griseus_chok1gshd
ENSXMAG00000006945	rab18b	99	85.366	ENSCGRG00000017201	Rab18	99	84.878	Cricetulus_griseus_crigri
ENSXMAG00000006945	rab18b	99	89.216	ENSCSEG00000016803	rab18b	94	94.022	Cynoglossus_semilaevis
ENSXMAG00000006945	rab18b	99	85.784	ENSDARG00000098344	rab18b	99	85.784	Danio_rerio
ENSXMAG00000006945	rab18b	99	85.366	ENSDNOG00000047713	RAB18	99	85.366	Dasypus_novemcinctus
ENSXMAG00000006945	rab18b	55	86.726	ENSDNOG00000038845	-	75	86.726	Dasypus_novemcinctus
ENSXMAG00000006945	rab18b	85	82.184	ENSDORG00000029360	-	83	82.184	Dipodomys_ordii
ENSXMAG00000006945	rab18b	99	84.878	ENSDORG00000028596	-	99	84.390	Dipodomys_ordii
ENSXMAG00000006945	rab18b	99	85.366	ENSEASG00005007164	RAB18	99	85.366	Equus_asinus_asinus
ENSXMAG00000006945	rab18b	99	85.366	ENSECAG00000017521	RAB18	88	85.366	Equus_caballus
ENSXMAG00000006945	rab18b	100	83.981	ENSELUG00000016450	rab18b	100	83.981	Esox_lucius
ENSXMAG00000006945	rab18b	99	85.366	ENSFCAG00000027161	RAB18	99	85.366	Felis_catus
ENSXMAG00000006945	rab18b	94	85.938	ENSFALG00000007160	RAB18	99	84.466	Ficedula_albicollis
ENSXMAG00000006945	rab18b	100	95.610	ENSFHEG00000020035	rab18b	100	95.610	Fundulus_heteroclitus
ENSXMAG00000006945	rab18b	100	83.415	ENSGMOG00000016608	rab18b	100	83.415	Gadus_morhua
ENSXMAG00000006945	rab18b	99	85.366	ENSGALG00000007435	RAB18	99	85.366	Gallus_gallus
ENSXMAG00000006945	rab18b	100	98.537	ENSGAFG00000008560	rab18b	100	98.537	Gambusia_affinis
ENSXMAG00000006945	rab18b	100	88.780	ENSGACG00000016395	rab18b	100	88.780	Gasterosteus_aculeatus
ENSXMAG00000006945	rab18b	99	85.366	ENSGGOG00000008086	RAB18	99	85.366	Gorilla_gorilla
ENSXMAG00000006945	rab18b	100	93.171	ENSHBUG00000003696	rab18b	100	93.171	Haplochromis_burtoni
ENSXMAG00000006945	rab18b	99	85.366	ENSHGLG00000004365	RAB18	99	85.366	Heterocephalus_glaber_female
ENSXMAG00000006945	rab18b	99	72.059	ENSHGLG00000007301	-	95	72.059	Heterocephalus_glaber_female
ENSXMAG00000006945	rab18b	99	85.366	ENSHGLG00100013089	-	99	85.366	Heterocephalus_glaber_male
ENSXMAG00000006945	rab18b	99	72.059	ENSHGLG00100009117	-	95	72.059	Heterocephalus_glaber_male
ENSXMAG00000006945	rab18b	100	92.195	ENSHCOG00000002217	rab18b	100	92.195	Hippocampus_comes
ENSXMAG00000006945	rab18b	99	84.314	ENSIPUG00000010859	rab18b	99	84.314	Ictalurus_punctatus
ENSXMAG00000006945	rab18b	99	85.366	ENSSTOG00000014560	-	99	84.878	Ictidomys_tridecemlineatus
ENSXMAG00000006945	rab18b	100	95.122	ENSKMAG00000007364	rab18b	100	95.122	Kryptolebias_marmoratus
ENSXMAG00000006945	rab18b	100	92.195	ENSLBEG00000019428	rab18b	100	92.195	Labrus_bergylta
ENSXMAG00000006945	rab18b	99	75.980	ENSLACG00000011256	rab18b	99	75.980	Latimeria_chalumnae
ENSXMAG00000006945	rab18b	94	86.458	ENSLAFG00000015582	RAB18	99	85.366	Loxodonta_africana
ENSXMAG00000006945	rab18b	99	85.366	ENSMFAG00000006430	RAB18	99	85.366	Macaca_fascicularis
ENSXMAG00000006945	rab18b	98	85.572	ENSMMUG00000046971	RAB18	67	88.649	Macaca_mulatta
ENSXMAG00000006945	rab18b	99	85.366	ENSMNEG00000038180	RAB18	99	85.366	Macaca_nemestrina
ENSXMAG00000006945	rab18b	99	85.366	ENSMLEG00000033595	RAB18	99	85.366	Mandrillus_leucophaeus
ENSXMAG00000006945	rab18b	99	90.196	ENSMAMG00000018445	rab18b	99	90.196	Mastacembelus_armatus
ENSXMAG00000006945	rab18b	100	93.171	ENSMZEG00005008244	rab18b	100	93.171	Maylandia_zebra
ENSXMAG00000006945	rab18b	99	75.490	ENSMAUG00000020698	-	99	75.490	Mesocricetus_auratus
ENSXMAG00000006945	rab18b	94	86.458	ENSMICG00000017280	RAB18	99	85.366	Microcebus_murinus
ENSXMAG00000006945	rab18b	99	85.366	ENSMOCG00000013044	Rab18	99	84.878	Microtus_ochrogaster
ENSXMAG00000006945	rab18b	100	77.419	ENSMMOG00000017849	rab18b	100	77.880	Mola_mola
ENSXMAG00000006945	rab18b	99	78.431	ENSMODG00000024936	-	99	78.431	Monodelphis_domestica
ENSXMAG00000006945	rab18b	99	85.294	ENSMODG00000008253	RAB18	99	85.294	Monodelphis_domestica
ENSXMAG00000006945	rab18b	99	91.667	ENSMALG00000005069	rab18b	99	91.667	Monopterus_albus
ENSXMAG00000006945	rab18b	99	85.366	MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	Mus_caroli
ENSXMAG00000006945	rab18b	99	85.366	ENSMUSG00000073639	Rab18	99	84.878	Mus_musculus
ENSXMAG00000006945	rab18b	99	85.366	MGP_PahariEiJ_G0018716	Rab18	99	84.878	Mus_pahari
ENSXMAG00000006945	rab18b	99	85.366	MGP_SPRETEiJ_G0022894	Rab18	99	84.878	Mus_spretus
ENSXMAG00000006945	rab18b	99	85.366	ENSMPUG00000010592	RAB18	99	85.366	Mustela_putorius_furo
ENSXMAG00000006945	rab18b	99	74.468	ENSMLUG00000027295	RAB18	99	74.468	Myotis_lucifugus
ENSXMAG00000006945	rab18b	99	85.366	ENSNGAG00000001465	Rab18	99	84.878	Nannospalax_galili
ENSXMAG00000006945	rab18b	100	92.683	ENSNBRG00000008137	rab18b	100	92.683	Neolamprologus_brichardi
ENSXMAG00000006945	rab18b	99	85.366	ENSNLEG00000016970	RAB18	99	85.366	Nomascus_leucogenys
ENSXMAG00000006945	rab18b	99	85.366	ENSODEG00000004150	-	99	84.878	Octodon_degus
ENSXMAG00000006945	rab18b	100	92.683	ENSONIG00000018673	rab18b	100	92.683	Oreochromis_niloticus
ENSXMAG00000006945	rab18b	91	88.770	ENSOANG00000021391	RAB18	99	85.854	Ornithorhynchus_anatinus
ENSXMAG00000006945	rab18b	99	84.390	ENSOCUG00000022307	RAB18	99	83.902	Oryctolagus_cuniculus
ENSXMAG00000006945	rab18b	100	94.146	ENSORLG00000009609	rab18b	100	94.146	Oryzias_latipes
ENSXMAG00000006945	rab18b	100	94.146	ENSORLG00020011590	rab18b	100	94.146	Oryzias_latipes_hni
ENSXMAG00000006945	rab18b	100	94.146	ENSORLG00015007182	rab18b	100	94.146	Oryzias_latipes_hsok
ENSXMAG00000006945	rab18b	100	95.122	ENSOMEG00000007546	rab18b	100	95.122	Oryzias_melastigma
ENSXMAG00000006945	rab18b	94	86.458	ENSOGAG00000028015	RAB18	99	85.366	Otolemur_garnettii
ENSXMAG00000006945	rab18b	99	85.366	ENSOARG00000016208	RAB18	99	85.366	Ovis_aries
ENSXMAG00000006945	rab18b	99	85.366	ENSPPAG00000041625	RAB18	99	85.366	Pan_paniscus
ENSXMAG00000006945	rab18b	99	85.366	ENSPPRG00000010314	RAB18	99	85.366	Panthera_pardus
ENSXMAG00000006945	rab18b	99	85.366	ENSPTIG00000011667	RAB18	99	85.366	Panthera_tigris_altaica
ENSXMAG00000006945	rab18b	99	85.366	ENSPTRG00000002384	RAB18	99	85.366	Pan_troglodytes
ENSXMAG00000006945	rab18b	99	85.366	ENSPANG00000023005	RAB18	99	85.366	Papio_anubis
ENSXMAG00000006945	rab18b	98	82.439	ENSPMAG00000005322	rab18b	98	80.392	Petromyzon_marinus
ENSXMAG00000006945	rab18b	99	85.784	ENSPCIG00000028705	-	88	85.784	Phascolarctos_cinereus
ENSXMAG00000006945	rab18b	100	98.537	ENSPFOG00000013491	rab18b	100	98.537	Poecilia_formosa
ENSXMAG00000006945	rab18b	100	98.537	ENSPLAG00000019136	rab18b	100	98.537	Poecilia_latipinna
ENSXMAG00000006945	rab18b	100	98.537	ENSPMEG00000008223	rab18b	100	98.537	Poecilia_mexicana
ENSXMAG00000006945	rab18b	99	85.366	ENSPPYG00000002172	RAB18	99	85.366	Pongo_abelii
ENSXMAG00000006945	rab18b	94	86.458	ENSPCOG00000018906	RAB18	99	85.366	Propithecus_coquereli
ENSXMAG00000006945	rab18b	100	93.171	ENSPNYG00000001751	rab18b	100	93.171	Pundamilia_nyererei
ENSXMAG00000006945	rab18b	99	85.784	ENSPNAG00000002404	rab18b	99	85.784	Pygocentrus_nattereri
ENSXMAG00000006945	rab18b	99	85.366	ENSRNOG00000018972	Rab18	99	84.878	Rattus_norvegicus
ENSXMAG00000006945	rab18b	99	84.878	ENSRBIG00000035948	RAB18	99	84.878	Rhinopithecus_bieti
ENSXMAG00000006945	rab18b	99	85.366	ENSRROG00000040563	RAB18	99	85.366	Rhinopithecus_roxellana
ENSXMAG00000006945	rab18b	99	85.784	ENSSHAG00000007613	RAB18	99	85.784	Sarcophilus_harrisii
ENSXMAG00000006945	rab18b	100	91.707	ENSSMAG00000011814	rab18b	100	91.707	Scophthalmus_maximus
ENSXMAG00000006945	rab18b	100	92.683	ENSSDUG00000005960	rab18b	100	92.683	Seriola_dumerili
ENSXMAG00000006945	rab18b	100	92.683	ENSSLDG00000006014	rab18b	100	92.683	Seriola_lalandi_dorsalis
ENSXMAG00000006945	rab18b	100	92.195	ENSSPAG00000020875	rab18b	100	92.195	Stegastes_partitus
ENSXMAG00000006945	rab18b	99	85.366	ENSSSCG00000028655	RAB18	99	85.366	Sus_scrofa
ENSXMAG00000006945	rab18b	94	75.342	ENSTGUG00000001105	-	99	74.678	Taeniopygia_guttata
ENSXMAG00000006945	rab18b	100	92.195	ENSTRUG00000004283	rab18b	100	92.195	Takifugu_rubripes
ENSXMAG00000006945	rab18b	100	90.291	ENSTNIG00000007882	rab18b	100	89.320	Tetraodon_nigroviridis
ENSXMAG00000006945	rab18b	99	85.366	ENSVVUG00000001705	RAB18	99	85.366	Vulpes_vulpes