EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000006953 (Gene tree)
Gene ID: 102221632
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2 subunit A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3284 bases
Position: chr5:10122119-10125402
Accession: 102221632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000006976	RNase_HII	PF01351.18	1e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000006984	-	1041	XM_005797515	ENSXMAP00000006976	305 (aa)	XP_005797572	M3ZXN2

Gene Model

Click here to download ENSXMAG00000006953's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000006953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000006953	rnaseh2a	100	60.656	ENSG00000104889	RNASEH2A	99	65.942	Homo_sapiens
ENSXMAG00000006953	rnaseh2a	100	87.662	ENSAPOG00000004101	rnaseh2a	100	87.662	Acanthochromis_polyacanthus
ENSXMAG00000006953	rnaseh2a	100	59.016	ENSAMEG00000012323	RNASEH2A	100	59.016	Ailuropoda_melanoleuca
ENSXMAG00000006953	rnaseh2a	84	88.235	ENSACIG00000002658	rnaseh2a	100	88.235	Amphilophus_citrinellus
ENSXMAG00000006953	rnaseh2a	100	87.338	ENSAOCG00000009217	rnaseh2a	100	87.338	Amphiprion_ocellaris
ENSXMAG00000006953	rnaseh2a	100	87.338	ENSAPEG00000022937	rnaseh2a	100	87.338	Amphiprion_percula
ENSXMAG00000006953	rnaseh2a	100	85.761	ENSATEG00000000908	rnaseh2a	100	85.761	Anabas_testudineus
ENSXMAG00000006953	rnaseh2a	100	67.869	ENSACAG00000003338	RNASEH2A	100	67.869	Anolis_carolinensis
ENSXMAG00000006953	rnaseh2a	100	46.645	ENSANAG00000037932	RNASEH2A	100	46.645	Aotus_nancymaae
ENSXMAG00000006953	rnaseh2a	100	85.714	ENSACLG00000009169	rnaseh2a	100	85.714	Astatotilapia_calliptera
ENSXMAG00000006953	rnaseh2a	100	71.661	ENSAMXG00000000436	rnaseh2a	100	71.661	Astyanax_mexicanus
ENSXMAG00000006953	rnaseh2a	100	61.311	ENSBTAG00000009661	RNASEH2A	100	61.311	Bos_taurus
ENSXMAG00000006953	rnaseh2a	90	47.842	WBGene00004383	rnh-2	92	47.842	Caenorhabditis_elegans
ENSXMAG00000006953	rnaseh2a	100	60.586	ENSCJAG00000004873	RNASEH2A	100	60.586	Callithrix_jacchus
ENSXMAG00000006953	rnaseh2a	100	58.958	ENSCAFG00000017159	RNASEH2A	100	58.958	Canis_familiaris
ENSXMAG00000006953	rnaseh2a	100	58.958	ENSCAFG00020005190	RNASEH2A	60	58.958	Canis_lupus_dingo
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSCHIG00000014460	RNASEH2A	100	60.984	Capra_hircus
ENSXMAG00000006953	rnaseh2a	100	61.311	ENSTSYG00000025418	RNASEH2A	100	61.311	Carlito_syrichta
ENSXMAG00000006953	rnaseh2a	64	54.592	ENSCAPG00000003411	RNASEH2A	100	54.592	Cavia_aperea
ENSXMAG00000006953	rnaseh2a	100	58.361	ENSCPOG00000038877	RNASEH2A	100	58.361	Cavia_porcellus
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSCCAG00000030453	RNASEH2A	100	60.984	Cebus_capucinus
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSCATG00000029609	RNASEH2A	100	60.984	Cercocebus_atys
ENSXMAG00000006953	rnaseh2a	100	60.656	ENSCLAG00000014930	RNASEH2A	100	60.656	Chinchilla_lanigera
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSCSAG00000006567	RNASEH2A	100	60.984	Chlorocebus_sabaeus
ENSXMAG00000006953	rnaseh2a	100	67.213	ENSCPBG00000023909	RNASEH2A	100	67.213	Chrysemys_picta_bellii
ENSXMAG00000006953	rnaseh2a	100	52.131	ENSCING00000006190	-	100	52.131	Ciona_intestinalis
ENSXMAG00000006953	rnaseh2a	100	50.820	ENSCSAVG00000010904	-	100	50.820	Ciona_savignyi
ENSXMAG00000006953	rnaseh2a	100	61.311	ENSCANG00000027433	RNASEH2A	100	61.311	Colobus_angolensis_palliatus
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSCGRG00001005021	Rnaseh2a	100	60.984	Cricetulus_griseus_chok1gshd
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSCGRG00000016602	Rnaseh2a	100	60.984	Cricetulus_griseus_crigri
ENSXMAG00000006953	rnaseh2a	99	85.099	ENSCSEG00000009842	rnaseh2a	99	85.099	Cynoglossus_semilaevis
ENSXMAG00000006953	rnaseh2a	99	80.528	ENSCVAG00000021203	rnaseh2a	99	80.528	Cyprinodon_variegatus
ENSXMAG00000006953	rnaseh2a	100	81.759	ENSDARG00000018891	rnaseh2a	100	81.759	Danio_rerio
ENSXMAG00000006953	rnaseh2a	86	57.854	ENSDNOG00000036532	RNASEH2A	100	57.854	Dasypus_novemcinctus
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSDORG00000009008	Rnaseh2a	100	60.984	Dipodomys_ordii
ENSXMAG00000006953	rnaseh2a	96	48.658	FBgn0031252	CG13690	85	48.658	Drosophila_melanogaster
ENSXMAG00000006953	rnaseh2a	70	56.338	ENSETEG00000001956	-	100	56.338	Echinops_telfairi
ENSXMAG00000006953	rnaseh2a	98	55.000	ENSEBUG00000003380	rnaseh2a	92	55.000	Eptatretus_burgeri
ENSXMAG00000006953	rnaseh2a	86	64.885	ENSEASG00005004118	RNASEH2A	95	64.885	Equus_asinus_asinus
ENSXMAG00000006953	rnaseh2a	100	59.344	ENSECAG00000007013	RNASEH2A	100	59.344	Equus_caballus
ENSXMAG00000006953	rnaseh2a	100	58.033	ENSEEUG00000008222	RNASEH2A	100	58.033	Erinaceus_europaeus
ENSXMAG00000006953	rnaseh2a	99	80.528	ENSELUG00000023079	rnaseh2a	96	76.113	Esox_lucius
ENSXMAG00000006953	rnaseh2a	100	59.016	ENSFCAG00000000474	RNASEH2A	100	59.016	Felis_catus
ENSXMAG00000006953	rnaseh2a	100	60.656	ENSFDAG00000003595	RNASEH2A	96	65.339	Fukomys_damarensis
ENSXMAG00000006953	rnaseh2a	100	95.082	ENSFHEG00000007682	rnaseh2a	100	95.082	Fundulus_heteroclitus
ENSXMAG00000006953	rnaseh2a	100	77.994	ENSGMOG00000005650	rnaseh2a	100	77.994	Gadus_morhua
ENSXMAG00000006953	rnaseh2a	100	61.111	ENSGALG00000052002	RNASEH2A	73	61.111	Gallus_gallus
ENSXMAG00000006953	rnaseh2a	100	97.377	ENSGAFG00000009624	rnaseh2a	100	97.377	Gambusia_affinis
ENSXMAG00000006953	rnaseh2a	100	86.275	ENSGACG00000016019	rnaseh2a	100	86.275	Gasterosteus_aculeatus
ENSXMAG00000006953	rnaseh2a	100	66.557	ENSGAGG00000013859	RNASEH2A	100	66.557	Gopherus_agassizii
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSGGOG00000005846	RNASEH2A	100	60.984	Gorilla_gorilla
ENSXMAG00000006953	rnaseh2a	93	88.380	ENSHBUG00000005267	rnaseh2a	98	88.380	Haplochromis_burtoni
ENSXMAG00000006953	rnaseh2a	100	60.328	ENSHGLG00000018801	RNASEH2A	100	60.328	Heterocephalus_glaber_female
ENSXMAG00000006953	rnaseh2a	100	60.656	ENSHGLG00100015773	RNASEH2A	100	60.656	Heterocephalus_glaber_male
ENSXMAG00000006953	rnaseh2a	100	80.984	ENSHCOG00000016593	rnaseh2a	100	80.984	Hippocampus_comes
ENSXMAG00000006953	rnaseh2a	100	81.433	ENSIPUG00000024299	rnaseh2a	100	81.433	Ictalurus_punctatus
ENSXMAG00000006953	rnaseh2a	100	59.672	ENSSTOG00000006224	RNASEH2A	99	66.667	Ictidomys_tridecemlineatus
ENSXMAG00000006953	rnaseh2a	100	62.092	ENSJJAG00000017547	Rnaseh2a	100	62.092	Jaculus_jaculus
ENSXMAG00000006953	rnaseh2a	100	87.541	ENSKMAG00000019829	rnaseh2a	100	87.541	Kryptolebias_marmoratus
ENSXMAG00000006953	rnaseh2a	100	83.442	ENSLBEG00000020494	rnaseh2a	100	83.442	Labrus_bergylta
ENSXMAG00000006953	rnaseh2a	84	67.843	ENSLACG00000007789	RNASEH2A	99	67.843	Latimeria_chalumnae
ENSXMAG00000006953	rnaseh2a	100	77.377	ENSLOCG00000007890	rnaseh2a	99	77.377	Lepisosteus_oculatus
ENSXMAG00000006953	rnaseh2a	100	60.000	ENSLAFG00000015571	RNASEH2A	100	60.000	Loxodonta_africana
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSMFAG00000002011	RNASEH2A	100	60.984	Macaca_fascicularis
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSMMUG00000005690	RNASEH2A	100	60.984	Macaca_mulatta
ENSXMAG00000006953	rnaseh2a	100	60.328	ENSMNEG00000033054	RNASEH2A	100	60.328	Macaca_nemestrina
ENSXMAG00000006953	rnaseh2a	100	60.656	ENSMLEG00000043654	RNASEH2A	100	60.656	Mandrillus_leucophaeus
ENSXMAG00000006953	rnaseh2a	100	84.740	ENSMAMG00000003062	rnaseh2a	98	87.900	Mastacembelus_armatus
ENSXMAG00000006953	rnaseh2a	100	85.065	ENSMZEG00005023857	rnaseh2a	100	85.065	Maylandia_zebra
ENSXMAG00000006953	rnaseh2a	55	58.580	ENSMAUG00000021740	-	100	58.580	Mesocricetus_auratus
ENSXMAG00000006953	rnaseh2a	100	59.344	ENSMICG00000016430	RNASEH2A	100	59.344	Microcebus_murinus
ENSXMAG00000006953	rnaseh2a	100	61.564	ENSMOCG00000017408	Rnaseh2a	100	61.564	Microtus_ochrogaster
ENSXMAG00000006953	rnaseh2a	84	83.922	ENSMMOG00000008447	rnaseh2a	100	83.922	Mola_mola
ENSXMAG00000006953	rnaseh2a	100	66.558	ENSMODG00000006997	RNASEH2A	100	66.558	Monodelphis_domestica
ENSXMAG00000006953	rnaseh2a	100	85.065	ENSMALG00000021607	rnaseh2a	100	85.065	Monopterus_albus
ENSXMAG00000006953	rnaseh2a	100	43.871	MGP_CAROLIEiJ_G0031319	-	100	68.519	Mus_caroli
ENSXMAG00000006953	rnaseh2a	100	61.889	ENSMUSG00000052926	Rnaseh2a	100	68.519	Mus_musculus
ENSXMAG00000006953	rnaseh2a	100	60.984	MGP_PahariEiJ_G0022924	Rnaseh2a	100	68.519	Mus_pahari
ENSXMAG00000006953	rnaseh2a	100	62.215	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	68.519	Mus_spretus
ENSXMAG00000006953	rnaseh2a	100	60.000	ENSMPUG00000004586	RNASEH2A	100	60.000	Mustela_putorius_furo
ENSXMAG00000006953	rnaseh2a	100	60.328	ENSMLUG00000012723	RNASEH2A	100	60.328	Myotis_lucifugus
ENSXMAG00000006953	rnaseh2a	100	58.689	ENSNGAG00000017988	Rnaseh2a	100	58.689	Nannospalax_galili
ENSXMAG00000006953	rnaseh2a	100	86.039	ENSNBRG00000018731	rnaseh2a	100	86.039	Neolamprologus_brichardi
ENSXMAG00000006953	rnaseh2a	100	61.311	ENSNLEG00000012806	RNASEH2A	100	61.311	Nomascus_leucogenys
ENSXMAG00000006953	rnaseh2a	70	73.709	ENSMEUG00000006001	RNASEH2A	100	73.709	Notamacropus_eugenii
ENSXMAG00000006953	rnaseh2a	100	50.820	ENSOPRG00000004811	RNASEH2A	100	50.820	Ochotona_princeps
ENSXMAG00000006953	rnaseh2a	100	60.328	ENSODEG00000009772	RNASEH2A	100	60.328	Octodon_degus
ENSXMAG00000006953	rnaseh2a	100	86.039	ENSONIG00000018033	rnaseh2a	99	86.039	Oreochromis_niloticus
ENSXMAG00000006953	rnaseh2a	100	61.639	ENSOANG00000009079	RNASEH2A	100	61.639	Ornithorhynchus_anatinus
ENSXMAG00000006953	rnaseh2a	100	84.641	ENSORLG00000004042	rnaseh2a	100	84.641	Oryzias_latipes
ENSXMAG00000006953	rnaseh2a	100	84.641	ENSORLG00020009483	rnaseh2a	100	84.641	Oryzias_latipes_hni
ENSXMAG00000006953	rnaseh2a	100	84.641	ENSORLG00015007548	rnaseh2a	100	84.641	Oryzias_latipes_hsok
ENSXMAG00000006953	rnaseh2a	100	84.314	ENSOMEG00000016454	rnaseh2a	100	84.314	Oryzias_melastigma
ENSXMAG00000006953	rnaseh2a	100	58.689	ENSOGAG00000012214	RNASEH2A	100	58.689	Otolemur_garnettii
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSOARG00000010721	RNASEH2A	100	60.984	Ovis_aries
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSPPAG00000028092	RNASEH2A	100	60.984	Pan_paniscus
ENSXMAG00000006953	rnaseh2a	100	59.016	ENSPPRG00000010585	RNASEH2A	100	59.016	Panthera_pardus
ENSXMAG00000006953	rnaseh2a	100	59.344	ENSPTIG00000013366	RNASEH2A	100	59.344	Panthera_tigris_altaica
ENSXMAG00000006953	rnaseh2a	100	60.656	ENSPTRG00000010542	RNASEH2A	100	60.656	Pan_troglodytes
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSPANG00000034495	RNASEH2A	100	60.984	Papio_anubis
ENSXMAG00000006953	rnaseh2a	100	78.033	ENSPKIG00000009756	rnaseh2a	100	78.033	Paramormyrops_kingsleyae
ENSXMAG00000006953	rnaseh2a	66	68.000	ENSPSIG00000012039	RNASEH2A	100	68.000	Pelodiscus_sinensis
ENSXMAG00000006953	rnaseh2a	84	83.922	ENSPMGG00000023392	rnaseh2a	100	83.922	Periophthalmus_magnuspinnatus
ENSXMAG00000006953	rnaseh2a	100	61.364	ENSPEMG00000018009	Rnaseh2a	100	61.364	Peromyscus_maniculatus_bairdii
ENSXMAG00000006953	rnaseh2a	98	61.513	ENSPMAG00000009060	rnaseh2a	98	63.487	Petromyzon_marinus
ENSXMAG00000006953	rnaseh2a	100	66.558	ENSPCIG00000014119	RNASEH2A	100	66.558	Phascolarctos_cinereus
ENSXMAG00000006953	rnaseh2a	100	97.705	ENSPFOG00000012627	rnaseh2a	100	94.156	Poecilia_formosa
ENSXMAG00000006953	rnaseh2a	68	93.204	ENSPLAG00000018723	-	90	93.204	Poecilia_latipinna
ENSXMAG00000006953	rnaseh2a	84	97.255	ENSPLAG00000015901	rnaseh2a	100	97.255	Poecilia_latipinna
ENSXMAG00000006953	rnaseh2a	68	93.204	ENSPMEG00000009032	-	93	93.204	Poecilia_mexicana
ENSXMAG00000006953	rnaseh2a	84	97.255	ENSPMEG00000000647	rnaseh2a	100	97.255	Poecilia_mexicana
ENSXMAG00000006953	rnaseh2a	100	94.098	ENSPREG00000015015	rnaseh2a	100	94.098	Poecilia_reticulata
ENSXMAG00000006953	rnaseh2a	100	60.458	ENSPPYG00000009608	RNASEH2A	100	60.458	Pongo_abelii
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSPCAG00000015319	RNASEH2A	100	60.984	Procavia_capensis
ENSXMAG00000006953	rnaseh2a	100	59.016	ENSPCOG00000003686	RNASEH2A	100	59.016	Propithecus_coquereli
ENSXMAG00000006953	rnaseh2a	97	48.148	ENSPVAG00000014703	RNASEH2A	98	48.148	Pteropus_vampyrus
ENSXMAG00000006953	rnaseh2a	100	78.387	ENSPNYG00000023986	rnaseh2a	100	78.387	Pundamilia_nyererei
ENSXMAG00000006953	rnaseh2a	100	81.373	ENSPNAG00000021017	rnaseh2a	100	81.373	Pygocentrus_nattereri
ENSXMAG00000006953	rnaseh2a	100	60.912	ENSRNOG00000003504	Rnaseh2a	100	60.912	Rattus_norvegicus
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSRBIG00000023554	RNASEH2A	100	60.984	Rhinopithecus_bieti
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSRROG00000043799	RNASEH2A	100	60.984	Rhinopithecus_roxellana
ENSXMAG00000006953	rnaseh2a	87	38.849	YNL072W	RNH201	89	38.849	Saccharomyces_cerevisiae
ENSXMAG00000006953	rnaseh2a	100	60.984	ENSSBOG00000033164	RNASEH2A	100	60.984	Saimiri_boliviensis_boliviensis
ENSXMAG00000006953	rnaseh2a	100	64.194	ENSSHAG00000015552	RNASEH2A	100	64.194	Sarcophilus_harrisii
ENSXMAG00000006953	rnaseh2a	100	78.033	ENSSFOG00015009692	rnaseh2a	100	78.033	Scleropages_formosus
ENSXMAG00000006953	rnaseh2a	100	84.416	ENSSMAG00000013986	rnaseh2a	100	84.416	Scophthalmus_maximus
ENSXMAG00000006953	rnaseh2a	93	88.028	ENSSDUG00000005280	rnaseh2a	97	88.298	Seriola_dumerili
ENSXMAG00000006953	rnaseh2a	100	85.714	ENSSLDG00000023766	rnaseh2a	100	85.714	Seriola_lalandi_dorsalis
ENSXMAG00000006953	rnaseh2a	100	86.039	ENSSPAG00000012769	rnaseh2a	100	86.039	Stegastes_partitus
ENSXMAG00000006953	rnaseh2a	100	59.804	ENSSSCG00000013737	RNASEH2A	100	59.804	Sus_scrofa
ENSXMAG00000006953	rnaseh2a	100	80.323	ENSTRUG00000000049	rnaseh2a	100	80.323	Takifugu_rubripes
ENSXMAG00000006953	rnaseh2a	100	80.195	ENSTNIG00000004533	rnaseh2a	99	80.195	Tetraodon_nigroviridis
ENSXMAG00000006953	rnaseh2a	70	67.136	ENSTTRG00000003592	RNASEH2A	100	67.136	Tursiops_truncatus
ENSXMAG00000006953	rnaseh2a	100	59.016	ENSUAMG00000019593	RNASEH2A	99	62.857	Ursus_americanus
ENSXMAG00000006953	rnaseh2a	76	65.948	ENSUMAG00000006254	-	73	65.948	Ursus_maritimus
ENSXMAG00000006953	rnaseh2a	99	69.536	ENSXETG00000004762	rnaseh2a	98	69.536	Xenopus_tropicalis
ENSXMAG00000006953	rnaseh2a	100	99.344	ENSXCOG00000013485	rnaseh2a	100	99.344	Xiphophorus_couchianus