EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000007030 (Gene tree)
Gene ID: 102222158
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 19031 bases
Position: chr5:10216111-10235141
Accession: 102222158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000007115	ResIII	PF04851.15	1.8e-08	1	1
ENSXMAP00000036301	ResIII	PF04851.15	2e-08	1	1
ENSXMAP00000007115	BRK	PF07533.16	6e-16	1	1
ENSXMAP00000036301	BRK	PF07533.16	6.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000041211	-	8593	XM_005797517	ENSXMAP00000036301	1658 (aa)	XP_005797574	UPI000293C71E
ENSXMAT00000007123	-	4650	-	ENSXMAP00000007115	1549 (aa)	-	M3ZY21

Gene Model

Click here to download ENSXMAG00000007030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000007030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000007030	-	99	83.782	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSXMAG00000007030	-	79	87.660	ENSAPOG00000003509	smarca4a	98	86.273	Acanthochromis_polyacanthus
ENSXMAG00000007030	-	95	94.796	ENSAPOG00000004542	SMARCA4	99	95.887	Acanthochromis_polyacanthus
ENSXMAG00000007030	-	99	81.037	ENSAMEG00000010868	SMARCA4	100	80.531	Ailuropoda_melanoleuca
ENSXMAG00000007030	-	94	95.235	ENSACIG00000003035	-	97	95.916	Amphilophus_citrinellus
ENSXMAG00000007030	-	99	85.470	ENSACIG00000021550	smarca4a	98	85.235	Amphilophus_citrinellus
ENSXMAG00000007030	-	93	92.947	ENSAOCG00000009450	-	97	92.947	Amphiprion_ocellaris
ENSXMAG00000007030	-	89	86.619	ENSAOCG00000019167	smarca4a	100	85.714	Amphiprion_ocellaris
ENSXMAG00000007030	-	100	94.405	ENSAPEG00000023108	-	100	94.405	Amphiprion_percula
ENSXMAG00000007030	-	89	86.690	ENSAPEG00000015559	smarca4a	100	85.785	Amphiprion_percula
ENSXMAG00000007030	-	99	93.963	ENSATEG00000001094	-	98	94.207	Anabas_testudineus
ENSXMAG00000007030	-	99	84.675	ENSATEG00000011524	smarca4a	100	85.207	Anabas_testudineus
ENSXMAG00000007030	-	99	83.717	ENSANAG00000036991	SMARCA4	100	81.254	Aotus_nancymaae
ENSXMAG00000007030	-	98	85.786	ENSACLG00000000163	smarca4a	98	84.965	Astatotilapia_calliptera
ENSXMAG00000007030	-	95	94.588	ENSACLG00000008638	-	98	94.210	Astatotilapia_calliptera
ENSXMAG00000007030	-	94	87.412	ENSAMXG00000011238	-	99	89.523	Astyanax_mexicanus
ENSXMAG00000007030	-	97	86.182	ENSAMXG00000021023	smarca4a	99	85.565	Astyanax_mexicanus
ENSXMAG00000007030	-	99	84.394	ENSBTAG00000019220	SMARCA4	100	84.173	Bos_taurus
ENSXMAG00000007030	-	97	87.428	ENSCJAG00000005936	SMARCA4	95	87.861	Callithrix_jacchus
ENSXMAG00000007030	-	99	83.902	ENSCAFG00000017584	SMARCA4	100	84.412	Canis_familiaris
ENSXMAG00000007030	-	99	83.902	ENSCAFG00020024620	SMARCA4	99	84.412	Canis_lupus_dingo
ENSXMAG00000007030	-	99	80.815	ENSCHIG00000015318	SMARCA4	100	80.719	Capra_hircus
ENSXMAG00000007030	-	99	84.394	ENSTSYG00000012966	SMARCA4	100	84.353	Carlito_syrichta
ENSXMAG00000007030	-	93	83.276	ENSCAPG00000015932	SMARCA4	94	90.295	Cavia_aperea
ENSXMAG00000007030	-	99	84.061	ENSCPOG00000015549	SMARCA4	100	84.293	Cavia_porcellus
ENSXMAG00000007030	-	99	81.001	ENSCCAG00000031660	SMARCA4	99	81.563	Cebus_capucinus
ENSXMAG00000007030	-	99	83.782	ENSCATG00000029530	SMARCA4	100	84.293	Cercocebus_atys
ENSXMAG00000007030	-	98	85.218	ENSCLAG00000011946	SMARCA4	100	84.293	Chinchilla_lanigera
ENSXMAG00000007030	-	99	83.284	ENSCPBG00000009994	SMARCA4	100	84.062	Chrysemys_picta_bellii
ENSXMAG00000007030	-	99	83.722	ENSCANG00000036013	SMARCA4	100	84.293	Colobus_angolensis_palliatus
ENSXMAG00000007030	-	99	83.842	ENSCGRG00001016732	Smarca4	100	84.233	Cricetulus_griseus_chok1gshd
ENSXMAG00000007030	-	99	83.842	ENSCGRG00000017242	Smarca4	100	84.233	Cricetulus_griseus_crigri
ENSXMAG00000007030	-	97	84.270	ENSCSEG00000014771	smarca4a	100	84.046	Cynoglossus_semilaevis
ENSXMAG00000007030	-	99	92.414	ENSCVAG00000003018	-	99	92.896	Cyprinodon_variegatus
ENSXMAG00000007030	-	98	83.364	ENSCVAG00000006979	smarca4a	99	83.932	Cyprinodon_variegatus
ENSXMAG00000007030	-	92	84.575	ENSDARG00000104339	SMARCA4	95	82.568	Danio_rerio
ENSXMAG00000007030	-	99	85.972	ENSDARG00000077226	smarca4a	100	85.603	Danio_rerio
ENSXMAG00000007030	-	97	83.537	ENSDNOG00000048847	SMARCA4	90	90.899	Dasypus_novemcinctus
ENSXMAG00000007030	-	86	79.065	ENSDORG00000002544	Smarca4	91	79.886	Dipodomys_ordii
ENSXMAG00000007030	-	94	73.550	ENSETEG00000013361	SMARCA4	94	73.250	Echinops_telfairi
ENSXMAG00000007030	-	99	83.782	ENSEASG00005006167	SMARCA4	100	82.325	Equus_asinus_asinus
ENSXMAG00000007030	-	99	84.000	ENSECAG00000008334	SMARCA4	100	84.173	Equus_caballus
ENSXMAG00000007030	-	98	84.049	ENSELUG00000023232	-	94	85.149	Esox_lucius
ENSXMAG00000007030	-	98	85.678	ENSELUG00000010247	smarca4a	98	84.813	Esox_lucius
ENSXMAG00000007030	-	99	83.871	ENSFCAG00000004894	SMARCA4	100	84.321	Felis_catus
ENSXMAG00000007030	-	92	81.860	ENSFALG00000004208	SMARCA4	95	81.735	Ficedula_albicollis
ENSXMAG00000007030	-	92	84.365	ENSFDAG00000012237	SMARCA4	97	84.726	Fukomys_damarensis
ENSXMAG00000007030	-	98	82.070	ENSFHEG00000010182	smarca4a	100	83.164	Fundulus_heteroclitus
ENSXMAG00000007030	-	100	97.903	ENSFHEG00000007902	-	100	97.903	Fundulus_heteroclitus
ENSXMAG00000007030	-	93	84.721	ENSGMOG00000005756	-	86	85.185	Gadus_morhua
ENSXMAG00000007030	-	87	82.898	ENSGMOG00000002649	smarca4a	90	83.075	Gadus_morhua
ENSXMAG00000007030	-	74	81.745	ENSGALG00000047145	SMARCA4	100	83.220	Gallus_gallus
ENSXMAG00000007030	-	88	87.662	ENSGAFG00000014900	smarca4a	97	88.199	Gambusia_affinis
ENSXMAG00000007030	-	100	94.750	ENSGAFG00000008827	-	100	94.750	Gambusia_affinis
ENSXMAG00000007030	-	99	85.539	ENSGACG00000016033	-	100	84.426	Gasterosteus_aculeatus
ENSXMAG00000007030	-	96	84.826	ENSGACG00000006691	smarca4a	100	82.943	Gasterosteus_aculeatus
ENSXMAG00000007030	-	99	83.373	ENSGAGG00000016757	SMARCA4	100	84.154	Gopherus_agassizii
ENSXMAG00000007030	-	99	84.412	ENSGGOG00000009882	SMARCA4	100	84.293	Gorilla_gorilla
ENSXMAG00000007030	-	99	84.957	ENSHBUG00000021172	smarca4a	100	85.207	Haplochromis_burtoni
ENSXMAG00000007030	-	100	95.184	ENSHBUG00000005447	-	100	94.943	Haplochromis_burtoni
ENSXMAG00000007030	-	99	83.850	ENSHGLG00000010519	SMARCA4	100	84.110	Heterocephalus_glaber_female
ENSXMAG00000007030	-	99	83.682	ENSHGLG00100013774	SMARCA4	100	83.782	Heterocephalus_glaber_male
ENSXMAG00000007030	-	94	84.258	ENSHCOG00000009510	smarca4a	96	85.253	Hippocampus_comes
ENSXMAG00000007030	-	98	84.294	ENSIPUG00000016346	-	95	86.024	Ictalurus_punctatus
ENSXMAG00000007030	-	99	85.783	ENSIPUG00000006107	smarca4a	100	85.663	Ictalurus_punctatus
ENSXMAG00000007030	-	99	84.330	ENSSTOG00000007939	SMARCA4	100	84.293	Ictidomys_tridecemlineatus
ENSXMAG00000007030	-	99	82.208	ENSJJAG00000012877	Smarca4	100	82.176	Jaculus_jaculus
ENSXMAG00000007030	-	98	85.041	ENSKMAG00000011931	smarca4a	98	85.077	Kryptolebias_marmoratus
ENSXMAG00000007030	-	100	96.161	ENSKMAG00000019518	-	100	96.161	Kryptolebias_marmoratus
ENSXMAG00000007030	-	95	82.817	ENSLBEG00000017383	smarca4a	97	82.654	Labrus_bergylta
ENSXMAG00000007030	-	96	85.693	ENSLBEG00000020655	-	98	87.092	Labrus_bergylta
ENSXMAG00000007030	-	53	76.697	ENSLACG00000015309	SMARCA4	100	77.536	Latimeria_chalumnae
ENSXMAG00000007030	-	99	81.911	ENSLOCG00000007820	smarca4a	99	80.499	Lepisosteus_oculatus
ENSXMAG00000007030	-	99	83.811	ENSLAFG00000001433	SMARCA4	100	84.261	Loxodonta_africana
ENSXMAG00000007030	-	99	83.782	ENSMFAG00000032146	SMARCA4	99	84.293	Macaca_fascicularis
ENSXMAG00000007030	-	99	83.782	ENSMMUG00000012042	SMARCA4	99	89.965	Macaca_mulatta
ENSXMAG00000007030	-	99	84.334	ENSMNEG00000028512	SMARCA4	100	84.274	Macaca_nemestrina
ENSXMAG00000007030	-	99	83.962	ENSMLEG00000034976	SMARCA4	100	84.081	Mandrillus_leucophaeus
ENSXMAG00000007030	-	96	88.517	ENSMAMG00000009256	smarca4a	100	84.819	Mastacembelus_armatus
ENSXMAG00000007030	-	100	94.030	ENSMAMG00000002841	-	100	93.910	Mastacembelus_armatus
ENSXMAG00000007030	-	98	85.850	ENSMZEG00005003889	smarca4a	100	85.096	Maylandia_zebra
ENSXMAG00000007030	-	95	95.247	ENSMZEG00005023861	-	98	94.994	Maylandia_zebra
ENSXMAG00000007030	-	99	83.811	ENSMAUG00000020731	Smarca4	100	83.962	Mesocricetus_auratus
ENSXMAG00000007030	-	99	83.831	ENSMICG00000009806	SMARCA4	100	84.280	Microcebus_murinus
ENSXMAG00000007030	-	99	83.453	ENSMOCG00000022209	Smarca4	100	83.962	Microtus_ochrogaster
ENSXMAG00000007030	-	95	83.259	ENSMMOG00000007571	smarca4a	98	84.157	Mola_mola
ENSXMAG00000007030	-	99	91.878	ENSMMOG00000008466	-	98	91.199	Mola_mola
ENSXMAG00000007030	-	99	82.005	ENSMODG00000006287	SMARCA4	100	82.509	Monodelphis_domestica
ENSXMAG00000007030	-	89	92.883	ENSMALG00000021534	-	99	93.098	Monopterus_albus
ENSXMAG00000007030	-	95	84.892	ENSMALG00000003388	smarca4a	100	84.703	Monopterus_albus
ENSXMAG00000007030	-	99	83.722	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.153	Mus_caroli
ENSXMAG00000007030	-	99	83.722	ENSMUSG00000032187	Smarca4	99	86.153	Mus_musculus
ENSXMAG00000007030	-	99	84.274	MGP_PahariEiJ_G0014745	Smarca4	100	86.288	Mus_pahari
ENSXMAG00000007030	-	99	83.722	MGP_SPRETEiJ_G0033003	Smarca4	100	86.153	Mus_spretus
ENSXMAG00000007030	-	99	83.902	ENSMPUG00000005711	SMARCA4	100	84.353	Mustela_putorius_furo
ENSXMAG00000007030	-	99	84.523	ENSMLUG00000004491	-	100	84.283	Myotis_lucifugus
ENSXMAG00000007030	-	99	84.154	ENSNGAG00000021852	Smarca4	100	83.974	Nannospalax_galili
ENSXMAG00000007030	-	94	87.099	ENSNBRG00000011457	smarca4a	96	86.631	Neolamprologus_brichardi
ENSXMAG00000007030	-	89	94.109	ENSNBRG00000018865	-	99	94.468	Neolamprologus_brichardi
ENSXMAG00000007030	-	95	81.246	ENSNLEG00000012389	SMARCA4	94	81.514	Nomascus_leucogenys
ENSXMAG00000007030	-	80	96.552	ENSOPRG00000000885	-	76	96.552	Ochotona_princeps
ENSXMAG00000007030	-	98	85.651	ENSODEG00000017127	SMARCA4	99	84.893	Octodon_degus
ENSXMAG00000007030	-	99	84.907	ENSONIG00000008196	smarca4a	100	84.967	Oreochromis_niloticus
ENSXMAG00000007030	-	99	95.361	ENSONIG00000018040	-	100	95.120	Oreochromis_niloticus
ENSXMAG00000007030	-	98	78.729	ENSOCUG00000001787	SMARCA4	98	78.776	Oryctolagus_cuniculus
ENSXMAG00000007030	-	95	83.495	ENSORLG00000015452	smarca4a	99	82.928	Oryzias_latipes
ENSXMAG00000007030	-	97	93.851	ENSORLG00000003955	-	100	93.574	Oryzias_latipes
ENSXMAG00000007030	-	97	93.793	ENSORLG00020009728	-	100	93.577	Oryzias_latipes_hni
ENSXMAG00000007030	-	96	83.791	ENSORLG00020004611	smarca4a	99	85.018	Oryzias_latipes_hni
ENSXMAG00000007030	-	100	93.093	ENSORLG00015007739	-	100	93.153	Oryzias_latipes_hsok
ENSXMAG00000007030	-	96	83.915	ENSORLG00015016560	smarca4a	99	83.292	Oryzias_latipes_hsok
ENSXMAG00000007030	-	97	94.034	ENSOMEG00000016626	-	100	93.870	Oryzias_melastigma
ENSXMAG00000007030	-	98	83.770	ENSOMEG00000007486	smarca4a	99	82.959	Oryzias_melastigma
ENSXMAG00000007030	-	90	83.300	ENSOGAG00000016148	SMARCA4	100	83.166	Otolemur_garnettii
ENSXMAG00000007030	-	99	83.733	ENSOARG00000017454	SMARCA4	98	84.493	Ovis_aries
ENSXMAG00000007030	-	99	83.782	ENSPPAG00000043191	SMARCA4	100	84.293	Pan_paniscus
ENSXMAG00000007030	-	99	83.871	ENSPPRG00000000064	SMARCA4	100	84.321	Panthera_pardus
ENSXMAG00000007030	-	93	85.919	ENSPTIG00000017447	SMARCA4	100	78.169	Panthera_tigris_altaica
ENSXMAG00000007030	-	99	83.782	ENSPTRG00000010488	SMARCA4	100	84.293	Pan_troglodytes
ENSXMAG00000007030	-	99	84.062	ENSPANG00000011042	SMARCA4	99	84.394	Papio_anubis
ENSXMAG00000007030	-	99	87.020	ENSPKIG00000007770	SMARCA4	100	86.763	Paramormyrops_kingsleyae
ENSXMAG00000007030	-	97	85.821	ENSPKIG00000010087	-	97	84.826	Paramormyrops_kingsleyae
ENSXMAG00000007030	-	99	78.571	ENSPSIG00000005547	SMARCA4	99	80.923	Pelodiscus_sinensis
ENSXMAG00000007030	-	99	83.632	ENSPEMG00000020389	Smarca4	100	84.022	Peromyscus_maniculatus_bairdii
ENSXMAG00000007030	-	99	83.513	ENSPCIG00000017138	SMARCA4	100	84.574	Phascolarctos_cinereus
ENSXMAG00000007030	-	99	83.025	ENSPFOG00000007892	smarca4a	100	83.204	Poecilia_formosa
ENSXMAG00000007030	-	100	98.740	ENSPFOG00000012930	-	100	98.740	Poecilia_formosa
ENSXMAG00000007030	-	99	95.455	ENSPLAG00000018616	-	99	95.523	Poecilia_latipinna
ENSXMAG00000007030	-	98	85.398	ENSPLAG00000014294	smarca4a	99	85.081	Poecilia_latipinna
ENSXMAG00000007030	-	98	81.982	ENSPMEG00000003725	smarca4a	99	81.853	Poecilia_mexicana
ENSXMAG00000007030	-	99	98.270	ENSPMEG00000008929	-	98	99.296	Poecilia_mexicana
ENSXMAG00000007030	-	99	83.294	ENSPREG00000014608	smarca4a	94	89.647	Poecilia_reticulata
ENSXMAG00000007030	-	97	98.881	ENSPREG00000014823	-	98	99.296	Poecilia_reticulata
ENSXMAG00000007030	-	99	82.834	ENSPPYG00000009568	SMARCA4	100	82.246	Pongo_abelii
ENSXMAG00000007030	-	79	81.457	ENSPCAG00000014054	SMARCA4	77	80.795	Procavia_capensis
ENSXMAG00000007030	-	99	84.371	ENSPCOG00000023011	SMARCA4	100	84.160	Propithecus_coquereli
ENSXMAG00000007030	-	79	92.946	ENSPVAG00000007787	SMARCA4	96	75.043	Pteropus_vampyrus
ENSXMAG00000007030	-	96	95.856	ENSPNYG00000023995	-	99	95.856	Pundamilia_nyererei
ENSXMAG00000007030	-	98	86.693	ENSPNYG00000000717	smarca4a	96	85.705	Pundamilia_nyererei
ENSXMAG00000007030	-	97	85.463	ENSPNAG00000024136	smarca4a	98	85.080	Pygocentrus_nattereri
ENSXMAG00000007030	-	94	86.325	ENSPNAG00000006636	-	97	85.019	Pygocentrus_nattereri
ENSXMAG00000007030	-	99	83.722	ENSRNOG00000009271	Smarca4	100	84.113	Rattus_norvegicus
ENSXMAG00000007030	-	99	84.293	ENSRBIG00000038696	SMARCA4	99	84.173	Rhinopithecus_bieti
ENSXMAG00000007030	-	99	83.722	ENSRROG00000045509	SMARCA4	100	84.233	Rhinopithecus_roxellana
ENSXMAG00000007030	-	99	84.303	ENSSBOG00000026896	SMARCA4	99	84.457	Saimiri_boliviensis_boliviensis
ENSXMAG00000007030	-	99	83.274	ENSSHAG00000001642	SMARCA4	100	84.454	Sarcophilus_harrisii
ENSXMAG00000007030	-	95	83.592	ENSSFOG00015009921	-	90	91.271	Scleropages_formosus
ENSXMAG00000007030	-	99	86.792	ENSSFOG00015013823	smarca4	97	86.962	Scleropages_formosus
ENSXMAG00000007030	-	99	84.267	ENSSMAG00000003200	smarca4a	100	83.492	Scophthalmus_maximus
ENSXMAG00000007030	-	100	90.969	ENSSMAG00000014082	-	100	91.632	Scophthalmus_maximus
ENSXMAG00000007030	-	98	81.710	ENSSDUG00000017298	smarca4a	100	79.593	Seriola_dumerili
ENSXMAG00000007030	-	99	94.357	ENSSDUG00000005388	-	98	94.849	Seriola_dumerili
ENSXMAG00000007030	-	96	92.899	ENSSLDG00000023663	-	99	93.321	Seriola_lalandi_dorsalis
ENSXMAG00000007030	-	99	84.666	ENSSLDG00000024486	smarca4a	100	85.977	Seriola_lalandi_dorsalis
ENSXMAG00000007030	-	64	96.894	ENSSARG00000013477	SMARCA4	82	96.894	Sorex_araneus
ENSXMAG00000007030	-	95	81.297	ENSSPUG00000004558	SMARCA4	98	81.078	Sphenodon_punctatus
ENSXMAG00000007030	-	100	95.006	ENSSPAG00000012533	-	100	95.006	Stegastes_partitus
ENSXMAG00000007030	-	98	85.999	ENSSPAG00000004248	smarca4a	99	85.549	Stegastes_partitus
ENSXMAG00000007030	-	99	83.931	ENSSSCG00000013629	SMARCA4	100	84.381	Sus_scrofa
ENSXMAG00000007030	-	54	85.024	ENSTGUG00000015488	-	99	84.923	Taeniopygia_guttata
ENSXMAG00000007030	-	89	82.035	ENSTRUG00000004885	smarca4a	100	82.353	Takifugu_rubripes
ENSXMAG00000007030	-	97	91.448	ENSTRUG00000001378	SMARCA4	99	91.448	Takifugu_rubripes
ENSXMAG00000007030	-	99	89.717	ENSTNIG00000004536	SMARCA4	100	89.116	Tetraodon_nigroviridis
ENSXMAG00000007030	-	72	82.472	ENSTNIG00000004859	-	100	82.979	Tetraodon_nigroviridis
ENSXMAG00000007030	-	50	100.000	ENSTBEG00000000707	-	52	100.000	Tupaia_belangeri
ENSXMAG00000007030	-	99	81.610	ENSTTRG00000009519	SMARCA4	100	81.048	Tursiops_truncatus
ENSXMAG00000007030	-	99	83.962	ENSUAMG00000014661	SMARCA4	100	84.412	Ursus_americanus
ENSXMAG00000007030	-	94	91.036	ENSUMAG00000022005	SMARCA4	98	90.578	Ursus_maritimus
ENSXMAG00000007030	-	99	83.902	ENSVVUG00000017820	SMARCA4	97	84.412	Vulpes_vulpes
ENSXMAG00000007030	-	98	80.346	ENSXETG00000009355	smarca4	99	83.570	Xenopus_tropicalis
ENSXMAG00000007030	-	99	96.929	ENSXCOG00000013494	-	99	96.929	Xiphophorus_couchianus
ENSXMAG00000007030	-	99	81.560	ENSXMAG00000006321	smarca4a	100	84.681	Xiphophorus_maculatus