EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000007168 (Gene tree)
Gene ID: 102223950
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11582 bases
Position: chr6:23372728-23384309
Accession: 102223950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000007278	KH_1	PF00013.29	3.4e-68	1	4
ENSXMAP00000007278	KH_1	PF00013.29	3.4e-68	2	4
ENSXMAP00000007278	KH_1	PF00013.29	3.4e-68	3	4
ENSXMAP00000007278	KH_1	PF00013.29	3.4e-68	4	4
ENSXMAP00000032407	KH_1	PF00013.29	8.7e-63	1	4
ENSXMAP00000032407	KH_1	PF00013.29	8.7e-63	2	4
ENSXMAP00000032407	KH_1	PF00013.29	8.7e-63	3	4
ENSXMAP00000032407	KH_1	PF00013.29	8.7e-63	4	4
ENSXMAP00000007278	KH_2	PF07650.17	1.2e-20	1	1
ENSXMAP00000032407	KH_2	PF07650.17	2.7e-19	1	1
ENSXMAP00000032407	DUF1897	PF09005.10	7.8e-11	1	1
ENSXMAP00000007278	DUF1897	PF09005.10	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000007286	-	2272	XM_005815266	ENSXMAP00000007278	600 (aa)	XP_005815323	M3ZYI4
ENSXMAT00000032875	-	1593	-	ENSXMAP00000032407	530 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000007168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000007168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000007168	fubp1	73	78.366	ENSG00000162613	FUBP1	97	71.677	Homo_sapiens
ENSXMAG00000007168	fubp1	99	96.020	ENSAPOG00000014845	fubp1	89	96.020	Acanthochromis_polyacanthus
ENSXMAG00000007168	fubp1	64	84.457	ENSAMEG00000007372	FUBP1	97	69.313	Ailuropoda_melanoleuca
ENSXMAG00000007168	fubp1	99	91.902	ENSACIG00000020024	fubp1	97	86.408	Amphilophus_citrinellus
ENSXMAG00000007168	fubp1	96	90.492	ENSAPEG00000012232	fubp1	96	90.725	Amphiprion_percula
ENSXMAG00000007168	fubp1	99	95.973	ENSATEG00000018619	fubp1	97	90.600	Anabas_testudineus
ENSXMAG00000007168	fubp1	64	84.751	ENSAPLG00000005965	FUBP1	97	73.083	Anas_platyrhynchos
ENSXMAG00000007168	fubp1	64	84.457	ENSACAG00000006310	FUBP1	89	69.921	Anolis_carolinensis
ENSXMAG00000007168	fubp1	99	96.321	ENSACLG00000006708	fubp1	92	96.321	Astatotilapia_calliptera
ENSXMAG00000007168	fubp1	98	85.417	ENSAMXG00000005525	fubp1	99	84.280	Astyanax_mexicanus
ENSXMAG00000007168	fubp1	73	78.587	ENSCJAG00000007062	FUBP1	97	72.089	Callithrix_jacchus
ENSXMAG00000007168	fubp1	73	78.166	ENSCAFG00000020361	FUBP1	97	71.835	Canis_familiaris
ENSXMAG00000007168	fubp1	65	83.862	ENSTSYG00000000148	FUBP1	97	72.297	Carlito_syrichta
ENSXMAG00000007168	fubp1	63	84.681	ENSCAPG00000011052	-	65	84.681	Cavia_aperea
ENSXMAG00000007168	fubp1	73	78.166	ENSCPOG00000002757	FUBP1	98	70.946	Cavia_porcellus
ENSXMAG00000007168	fubp1	73	63.714	ENSCCAG00000036537	FUBP1	96	64.286	Cebus_capucinus
ENSXMAG00000007168	fubp1	73	77.948	ENSCATG00000042126	FUBP1	97	71.677	Cercocebus_atys
ENSXMAG00000007168	fubp1	73	78.166	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSXMAG00000007168	fubp1	73	77.948	ENSCSAG00000001402	FUBP1	97	71.677	Chlorocebus_sabaeus
ENSXMAG00000007168	fubp1	73	77.948	ENSCHOG00000008177	FUBP1	95	71.835	Choloepus_hoffmanni
ENSXMAG00000007168	fubp1	73	79.911	ENSCGRG00001007103	Fubp1	97	72.222	Cricetulus_griseus_chok1gshd
ENSXMAG00000007168	fubp1	64	84.457	ENSCGRG00000003372	Fubp1	97	72.101	Cricetulus_griseus_crigri
ENSXMAG00000007168	fubp1	99	93.208	ENSCSEG00000021412	fubp1	97	88.691	Cynoglossus_semilaevis
ENSXMAG00000007168	fubp1	99	97.826	ENSCVAG00000014487	fubp1	91	97.826	Cyprinodon_variegatus
ENSXMAG00000007168	fubp1	99	81.818	ENSDARG00000029248	fubp1	97	79.905	Danio_rerio
ENSXMAG00000007168	fubp1	78	56.410	ENSDNOG00000034565	-	83	49.213	Dasypus_novemcinctus
ENSXMAG00000007168	fubp1	73	78.166	ENSDORG00000016534	Fubp1	95	71.835	Dipodomys_ordii
ENSXMAG00000007168	fubp1	71	85.470	ENSETEG00000000948	-	53	78.655	Echinops_telfairi
ENSXMAG00000007168	fubp1	96	46.082	ENSEBUG00000016143	fubp1	78	46.476	Eptatretus_burgeri
ENSXMAG00000007168	fubp1	72	82.432	ENSEEUG00000001287	FUBP1	84	68.884	Erinaceus_europaeus
ENSXMAG00000007168	fubp1	99	84.514	ENSELUG00000007990	fubp1	97	81.340	Esox_lucius
ENSXMAG00000007168	fubp1	73	79.157	ENSFALG00000005768	FUBP1	95	72.640	Ficedula_albicollis
ENSXMAG00000007168	fubp1	73	77.948	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSXMAG00000007168	fubp1	99	98.662	ENSFHEG00000005230	fubp1	97	92.695	Fundulus_heteroclitus
ENSXMAG00000007168	fubp1	99	87.406	ENSGMOG00000003370	fubp1	97	83.252	Gadus_morhua
ENSXMAG00000007168	fubp1	73	79.646	ENSGALG00000008939	FUBP1	97	73.323	Gallus_gallus
ENSXMAG00000007168	fubp1	99	98.194	ENSGAFG00000020972	fubp1	92	98.194	Gambusia_affinis
ENSXMAG00000007168	fubp1	99	92.897	ENSGACG00000016563	fubp1	97	88.103	Gasterosteus_aculeatus
ENSXMAG00000007168	fubp1	99	96.488	ENSHBUG00000009835	fubp1	100	91.346	Haplochromis_burtoni
ENSXMAG00000007168	fubp1	73	78.166	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSXMAG00000007168	fubp1	99	68.561	ENSHGLG00000002808	-	97	63.492	Heterocephalus_glaber_female
ENSXMAG00000007168	fubp1	75	74.292	ENSHGLG00100001414	-	97	64.286	Heterocephalus_glaber_male
ENSXMAG00000007168	fubp1	73	78.166	ENSHGLG00100003417	-	97	71.339	Heterocephalus_glaber_male
ENSXMAG00000007168	fubp1	99	91.340	ENSHCOG00000000910	fubp1	97	86.730	Hippocampus_comes
ENSXMAG00000007168	fubp1	99	85.050	ENSIPUG00000009896	fubp1	97	82.496	Ictalurus_punctatus
ENSXMAG00000007168	fubp1	73	78.747	ENSSTOG00000014312	FUBP1	97	72.089	Ictidomys_tridecemlineatus
ENSXMAG00000007168	fubp1	73	78.795	ENSJJAG00000020069	Fubp1	100	70.270	Jaculus_jaculus
ENSXMAG00000007168	fubp1	99	97.320	ENSKMAG00000018897	fubp1	91	97.320	Kryptolebias_marmoratus
ENSXMAG00000007168	fubp1	99	92.508	ENSLBEG00000012700	fubp1	89	92.695	Labrus_bergylta
ENSXMAG00000007168	fubp1	99	81.059	ENSLOCG00000003745	fubp1	92	80.800	Lepisosteus_oculatus
ENSXMAG00000007168	fubp1	64	84.457	ENSLAFG00000003273	FUBP1	98	74.074	Loxodonta_africana
ENSXMAG00000007168	fubp1	73	78.366	ENSMFAG00000031825	FUBP1	97	71.930	Macaca_fascicularis
ENSXMAG00000007168	fubp1	73	78.523	ENSMMUG00000002899	FUBP1	97	71.677	Macaca_mulatta
ENSXMAG00000007168	fubp1	73	77.948	ENSMNEG00000045212	FUBP1	97	71.677	Macaca_nemestrina
ENSXMAG00000007168	fubp1	99	94.745	ENSMAMG00000007489	fubp1	92	94.745	Mastacembelus_armatus
ENSXMAG00000007168	fubp1	99	96.321	ENSMZEG00005024298	fubp1	92	96.321	Maylandia_zebra
ENSXMAG00000007168	fubp1	64	84.795	ENSMGAG00000009424	FUBP1	97	73.299	Meleagris_gallopavo
ENSXMAG00000007168	fubp1	73	78.384	ENSMAUG00000016428	Fubp1	97	75.235	Mesocricetus_auratus
ENSXMAG00000007168	fubp1	73	78.855	ENSMOCG00000014751	Fubp1	97	72.142	Microtus_ochrogaster
ENSXMAG00000007168	fubp1	99	93.032	ENSMMOG00000019463	fubp1	99	91.525	Mola_mola
ENSXMAG00000007168	fubp1	70	72.646	ENSMODG00000020804	FUBP1	97	67.419	Monodelphis_domestica
ENSXMAG00000007168	fubp1	99	96.154	ENSMALG00000015173	fubp1	92	96.154	Monopterus_albus
ENSXMAG00000007168	fubp1	73	79.287	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.954	Mus_caroli
ENSXMAG00000007168	fubp1	73	79.065	ENSMUSG00000028034	Fubp1	99	75.763	Mus_musculus
ENSXMAG00000007168	fubp1	73	79.111	MGP_PahariEiJ_G0027191	Fubp1	99	75.810	Mus_pahari
ENSXMAG00000007168	fubp1	73	79.287	MGP_SPRETEiJ_G0026693	Fubp1	99	75.954	Mus_spretus
ENSXMAG00000007168	fubp1	64	84.211	ENSMLUG00000014802	FUBP1	97	69.149	Myotis_lucifugus
ENSXMAG00000007168	fubp1	73	75.497	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSXMAG00000007168	fubp1	99	88.224	ENSNBRG00000015099	fubp1	96	91.468	Neolamprologus_brichardi
ENSXMAG00000007168	fubp1	73	73.904	ENSNLEG00000009772	FUBP1	97	68.889	Nomascus_leucogenys
ENSXMAG00000007168	fubp1	72	64.889	ENSOPRG00000001175	FUBP1	95	61.270	Ochotona_princeps
ENSXMAG00000007168	fubp1	100	54.276	ENSODEG00000003657	-	97	52.970	Octodon_degus
ENSXMAG00000007168	fubp1	73	78.166	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSXMAG00000007168	fubp1	99	96.488	ENSONIG00000018381	fubp1	97	90.645	Oreochromis_niloticus
ENSXMAG00000007168	fubp1	64	84.457	ENSOANG00000009777	FUBP1	98	67.611	Ornithorhynchus_anatinus
ENSXMAG00000007168	fubp1	100	87.667	ENSORLG00000003540	fubp1	96	88.964	Oryzias_latipes
ENSXMAG00000007168	fubp1	99	94.983	ENSORLG00020005908	fubp1	96	88.364	Oryzias_latipes_hni
ENSXMAG00000007168	fubp1	99	94.983	ENSORLG00015008779	fubp1	97	89.221	Oryzias_latipes_hsok
ENSXMAG00000007168	fubp1	99	95.151	ENSOMEG00000021943	fubp1	97	87.255	Oryzias_melastigma
ENSXMAG00000007168	fubp1	64	83.965	ENSOGAG00000014233	FUBP1	97	68.892	Otolemur_garnettii
ENSXMAG00000007168	fubp1	73	78.587	ENSOARG00000013259	FUBP1	92	74.068	Ovis_aries
ENSXMAG00000007168	fubp1	73	78.166	ENSPPRG00000000413	FUBP1	97	71.835	Panthera_pardus
ENSXMAG00000007168	fubp1	73	78.166	ENSPTIG00000019450	FUBP1	97	71.835	Panthera_tigris_altaica
ENSXMAG00000007168	fubp1	69	79.286	ENSPSIG00000012965	FUBP1	96	75.047	Pelodiscus_sinensis
ENSXMAG00000007168	fubp1	98	87.736	ENSPMGG00000009060	fubp1	97	82.708	Periophthalmus_magnuspinnatus
ENSXMAG00000007168	fubp1	73	79.249	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSXMAG00000007168	fubp1	60	58.952	ENSPMAG00000001644	-	93	58.952	Petromyzon_marinus
ENSXMAG00000007168	fubp1	99	99.666	ENSPFOG00000000238	fubp1	91	99.666	Poecilia_formosa
ENSXMAG00000007168	fubp1	99	97.655	ENSPLAG00000021170	fubp1	96	95.918	Poecilia_latipinna
ENSXMAG00000007168	fubp1	100	99.667	ENSPMEG00000004747	fubp1	100	99.667	Poecilia_mexicana
ENSXMAG00000007168	fubp1	99	99.498	ENSPREG00000017911	fubp1	100	98.145	Poecilia_reticulata
ENSXMAG00000007168	fubp1	75	77.802	ENSPPYG00000001219	-	68	78.936	Pongo_abelii
ENSXMAG00000007168	fubp1	73	78.118	ENSPCAG00000012617	FUBP1	95	71.791	Procavia_capensis
ENSXMAG00000007168	fubp1	73	78.492	ENSPCOG00000024974	FUBP1	97	71.835	Propithecus_coquereli
ENSXMAG00000007168	fubp1	73	72.052	ENSPVAG00000014637	FUBP1	95	67.405	Pteropus_vampyrus
ENSXMAG00000007168	fubp1	99	96.321	ENSPNYG00000004552	fubp1	92	96.321	Pundamilia_nyererei
ENSXMAG00000007168	fubp1	99	87.086	ENSPNAG00000016207	fubp1	92	87.294	Pygocentrus_nattereri
ENSXMAG00000007168	fubp1	73	79.287	ENSRNOG00000043370	Fubp1	97	72.204	Rattus_norvegicus
ENSXMAG00000007168	fubp1	73	77.948	ENSRBIG00000042950	FUBP1	97	71.677	Rhinopithecus_bieti
ENSXMAG00000007168	fubp1	73	77.948	ENSRROG00000043534	FUBP1	97	71.677	Rhinopithecus_roxellana
ENSXMAG00000007168	fubp1	73	78.166	ENSSBOG00000027299	FUBP1	99	74.815	Saimiri_boliviensis_boliviensis
ENSXMAG00000007168	fubp1	64	83.871	ENSSHAG00000005367	FUBP1	99	74.532	Sarcophilus_harrisii
ENSXMAG00000007168	fubp1	99	84.833	ENSSFOG00015010213	fubp1	92	84.718	Scleropages_formosus
ENSXMAG00000007168	fubp1	99	90.820	ENSSMAG00000012029	fubp1	89	90.984	Scophthalmus_maximus
ENSXMAG00000007168	fubp1	99	95.238	ENSSDUG00000007383	fubp1	91	95.238	Seriola_dumerili
ENSXMAG00000007168	fubp1	99	95.238	ENSSLDG00000022863	fubp1	96	89.590	Seriola_lalandi_dorsalis
ENSXMAG00000007168	fubp1	73	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSXMAG00000007168	fubp1	99	69.516	ENSSPUG00000008389	FUBP1	93	69.182	Sphenodon_punctatus
ENSXMAG00000007168	fubp1	99	96.823	ENSSPAG00000010161	fubp1	92	96.823	Stegastes_partitus
ENSXMAG00000007168	fubp1	68	79.475	ENSTGUG00000006841	FUBP1	97	72.513	Taeniopygia_guttata
ENSXMAG00000007168	fubp1	99	92.140	ENSTRUG00000004615	fubp1	88	91.137	Takifugu_rubripes
ENSXMAG00000007168	fubp1	60	94.656	ENSTNIG00000019815	-	87	94.558	Tetraodon_nigroviridis
ENSXMAG00000007168	fubp1	78	84.091	ENSTBEG00000017333	FUBP1	59	88.690	Tupaia_belangeri
ENSXMAG00000007168	fubp1	73	78.166	ENSTTRG00000000096	FUBP1	95	71.677	Tursiops_truncatus
ENSXMAG00000007168	fubp1	73	78.166	ENSVPAG00000004709	FUBP1	96	71.677	Vicugna_pacos
ENSXMAG00000007168	fubp1	99	93.702	ENSXCOG00000019354	fubp1	91	93.702	Xiphophorus_couchianus