EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000007377 (Gene tree)
Gene ID: 102222496
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4467 bases
Position: chr2:6248236-6252702
Accession: 102222496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000007404	FDF	PF09532.10	8.7e-12	1	1
ENSXMAP00000007404	LSM14	PF12701.7	4.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000007412	-	1718	XM_005795929	ENSXMAP00000007404	478 (aa)	XP_005795986	M3ZYW0

Gene Model

Click here to download ENSXMAG00000007377's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000007377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000007377	edc3	100	69.155	ENSG00000179151	EDC3	100	79.630	Homo_sapiens
ENSXMAG00000007377	edc3	100	91.841	ENSAPOG00000010791	edc3	100	91.841	Acanthochromis_polyacanthus
ENSXMAG00000007377	edc3	100	59.146	ENSAPOG00000008655	EDC3	100	59.146	Acanthochromis_polyacanthus
ENSXMAG00000007377	edc3	100	68.566	ENSAMEG00000008963	EDC3	100	68.566	Ailuropoda_melanoleuca
ENSXMAG00000007377	edc3	100	89.749	ENSACIG00000017751	edc3	100	89.749	Amphilophus_citrinellus
ENSXMAG00000007377	edc3	99	63.564	ENSACIG00000005330	EDC3	99	64.128	Amphilophus_citrinellus
ENSXMAG00000007377	edc3	100	64.876	ENSAOCG00000009103	-	100	64.876	Amphiprion_ocellaris
ENSXMAG00000007377	edc3	100	91.632	ENSAOCG00000005431	edc3	100	91.632	Amphiprion_ocellaris
ENSXMAG00000007377	edc3	100	91.632	ENSAPEG00000000968	edc3	100	91.632	Amphiprion_percula
ENSXMAG00000007377	edc3	100	65.083	ENSAPEG00000007841	EDC3	100	65.083	Amphiprion_percula
ENSXMAG00000007377	edc3	100	91.423	ENSATEG00000015505	edc3	100	91.423	Anabas_testudineus
ENSXMAG00000007377	edc3	100	66.942	ENSATEG00000004205	-	100	66.942	Anabas_testudineus
ENSXMAG00000007377	edc3	83	74.623	ENSAPLG00000008957	EDC3	88	74.623	Anas_platyrhynchos
ENSXMAG00000007377	edc3	77	67.172	ENSACAG00000000460	-	100	67.172	Anolis_carolinensis
ENSXMAG00000007377	edc3	100	69.216	ENSANAG00000024078	EDC3	100	69.216	Aotus_nancymaae
ENSXMAG00000007377	edc3	100	89.540	ENSACLG00000007232	edc3	100	89.540	Astatotilapia_calliptera
ENSXMAG00000007377	edc3	100	65.010	ENSACLG00000018776	-	100	65.010	Astatotilapia_calliptera
ENSXMAG00000007377	edc3	100	79.365	ENSAMXG00000001589	edc3	100	79.365	Astyanax_mexicanus
ENSXMAG00000007377	edc3	100	69.155	ENSBTAG00000007308	EDC3	100	69.155	Bos_taurus
ENSXMAG00000007377	edc3	100	69.155	ENSCJAG00000017681	EDC3	100	69.155	Callithrix_jacchus
ENSXMAG00000007377	edc3	100	68.566	ENSCAFG00000017935	EDC3	100	68.566	Canis_familiaris
ENSXMAG00000007377	edc3	100	68.566	ENSCAFG00020003909	EDC3	100	68.566	Canis_lupus_dingo
ENSXMAG00000007377	edc3	100	69.352	ENSCHIG00000023658	EDC3	100	69.352	Capra_hircus
ENSXMAG00000007377	edc3	100	69.352	ENSTSYG00000004822	EDC3	100	69.352	Carlito_syrichta
ENSXMAG00000007377	edc3	100	69.155	ENSCPOG00000015595	EDC3	100	69.155	Cavia_porcellus
ENSXMAG00000007377	edc3	100	68.959	ENSCCAG00000021663	EDC3	100	68.959	Cebus_capucinus
ENSXMAG00000007377	edc3	100	68.959	ENSCATG00000037511	EDC3	100	68.959	Cercocebus_atys
ENSXMAG00000007377	edc3	100	69.155	ENSCLAG00000005700	EDC3	100	69.155	Chinchilla_lanigera
ENSXMAG00000007377	edc3	100	68.959	ENSCSAG00000014239	EDC3	100	68.959	Chlorocebus_sabaeus
ENSXMAG00000007377	edc3	100	69.155	ENSCPBG00000024239	EDC3	100	69.155	Chrysemys_picta_bellii
ENSXMAG00000007377	edc3	100	37.992	ENSCING00000022142	-	99	37.992	Ciona_intestinalis
ENSXMAG00000007377	edc3	100	68.959	ENSCANG00000028699	EDC3	100	68.959	Colobus_angolensis_palliatus
ENSXMAG00000007377	edc3	100	68.959	ENSCGRG00001013874	Edc3	100	68.959	Cricetulus_griseus_chok1gshd
ENSXMAG00000007377	edc3	100	68.959	ENSCGRG00000011885	Edc3	100	68.959	Cricetulus_griseus_crigri
ENSXMAG00000007377	edc3	99	89.518	ENSCSEG00000012996	edc3	99	89.518	Cynoglossus_semilaevis
ENSXMAG00000007377	edc3	100	96.025	ENSCVAG00000008023	edc3	100	96.025	Cyprinodon_variegatus
ENSXMAG00000007377	edc3	99	76.238	ENSDARG00000051931	edc3	99	76.238	Danio_rerio
ENSXMAG00000007377	edc3	100	60.853	ENSDNOG00000030661	EDC3	100	60.853	Dasypus_novemcinctus
ENSXMAG00000007377	edc3	68	79.630	ENSETEG00000002398	-	64	79.630	Echinops_telfairi
ENSXMAG00000007377	edc3	100	68.369	ENSEASG00005005071	EDC3	100	68.369	Equus_asinus_asinus
ENSXMAG00000007377	edc3	100	68.369	ENSECAG00000017994	EDC3	100	68.369	Equus_caballus
ENSXMAG00000007377	edc3	100	80.372	ENSELUG00000005794	edc3	100	80.372	Esox_lucius
ENSXMAG00000007377	edc3	100	71.042	ENSELUG00000007607	EDC3	100	71.042	Esox_lucius
ENSXMAG00000007377	edc3	100	68.762	ENSFCAG00000002014	EDC3	100	68.762	Felis_catus
ENSXMAG00000007377	edc3	98	68.273	ENSFALG00000004543	EDC3	96	68.273	Ficedula_albicollis
ENSXMAG00000007377	edc3	100	69.020	ENSFDAG00000012582	EDC3	100	69.020	Fukomys_damarensis
ENSXMAG00000007377	edc3	100	95.397	ENSFHEG00000009375	edc3	100	95.397	Fundulus_heteroclitus
ENSXMAG00000007377	edc3	100	85.655	ENSGMOG00000002715	edc3	100	85.655	Gadus_morhua
ENSXMAG00000007377	edc3	100	69.231	ENSGALG00000040181	EDC3	100	69.231	Gallus_gallus
ENSXMAG00000007377	edc3	100	97.490	ENSGAFG00000014433	edc3	100	97.490	Gambusia_affinis
ENSXMAG00000007377	edc3	99	60.274	ENSGACG00000014671	EDC3	99	60.078	Gasterosteus_aculeatus
ENSXMAG00000007377	edc3	100	88.285	ENSGACG00000009783	edc3	100	88.285	Gasterosteus_aculeatus
ENSXMAG00000007377	edc3	100	69.822	ENSGAGG00000023477	EDC3	100	69.822	Gopherus_agassizii
ENSXMAG00000007377	edc3	100	69.155	ENSGGOG00000003552	EDC3	100	69.155	Gorilla_gorilla
ENSXMAG00000007377	edc3	100	65.217	ENSHBUG00000020817	EDC3	100	65.217	Haplochromis_burtoni
ENSXMAG00000007377	edc3	100	89.540	ENSHBUG00000003635	edc3	100	89.540	Haplochromis_burtoni
ENSXMAG00000007377	edc3	100	87.083	ENSHCOG00000016834	edc3	100	87.083	Hippocampus_comes
ENSXMAG00000007377	edc3	99	78.715	ENSIPUG00000005695	edc3	100	78.715	Ictalurus_punctatus
ENSXMAG00000007377	edc3	100	69.155	ENSSTOG00000013936	EDC3	100	69.155	Ictidomys_tridecemlineatus
ENSXMAG00000007377	edc3	100	68.762	ENSJJAG00000008074	Edc3	100	68.762	Jaculus_jaculus
ENSXMAG00000007377	edc3	100	63.354	ENSKMAG00000001987	EDC3	100	63.354	Kryptolebias_marmoratus
ENSXMAG00000007377	edc3	100	92.484	ENSKMAG00000001243	edc3	100	92.484	Kryptolebias_marmoratus
ENSXMAG00000007377	edc3	100	90.377	ENSLBEG00000013435	edc3	99	90.377	Labrus_bergylta
ENSXMAG00000007377	edc3	100	64.286	ENSLBEG00000017984	EDC3	100	64.286	Labrus_bergylta
ENSXMAG00000007377	edc3	100	70.428	ENSLACG00000014149	EDC3	100	70.428	Latimeria_chalumnae
ENSXMAG00000007377	edc3	99	73.077	ENSLOCG00000014625	edc3	99	73.077	Lepisosteus_oculatus
ENSXMAG00000007377	edc3	100	69.291	ENSLAFG00000002992	EDC3	100	69.291	Loxodonta_africana
ENSXMAG00000007377	edc3	100	68.959	ENSMFAG00000043074	EDC3	100	68.959	Macaca_fascicularis
ENSXMAG00000007377	edc3	100	68.959	ENSMMUG00000011071	EDC3	100	68.959	Macaca_mulatta
ENSXMAG00000007377	edc3	100	68.959	ENSMNEG00000035316	EDC3	100	68.959	Macaca_nemestrina
ENSXMAG00000007377	edc3	100	68.959	ENSMLEG00000030372	EDC3	100	68.959	Mandrillus_leucophaeus
ENSXMAG00000007377	edc3	99	65.073	ENSMAMG00000005423	-	99	65.073	Mastacembelus_armatus
ENSXMAG00000007377	edc3	100	90.377	ENSMAMG00000000505	edc3	100	90.377	Mastacembelus_armatus
ENSXMAG00000007377	edc3	100	64.959	ENSMZEG00005005654	EDC3	100	64.959	Maylandia_zebra
ENSXMAG00000007377	edc3	100	89.331	ENSMZEG00005004892	edc3	100	89.331	Maylandia_zebra
ENSXMAG00000007377	edc3	100	69.231	ENSMGAG00000002617	EDC3	100	69.231	Meleagris_gallopavo
ENSXMAG00000007377	edc3	100	69.155	ENSMICG00000043190	EDC3	100	69.155	Microcebus_murinus
ENSXMAG00000007377	edc3	100	68.566	ENSMOCG00000016205	Edc3	100	68.566	Microtus_ochrogaster
ENSXMAG00000007377	edc3	99	90.566	ENSMMOG00000012278	edc3	99	90.566	Mola_mola
ENSXMAG00000007377	edc3	100	69.548	ENSMODG00000009442	EDC3	100	69.548	Monodelphis_domestica
ENSXMAG00000007377	edc3	100	89.958	ENSMALG00000008658	edc3	100	89.958	Monopterus_albus
ENSXMAG00000007377	edc3	100	69.155	MGP_CAROLIEiJ_G0032280	Edc3	100	78.462	Mus_caroli
ENSXMAG00000007377	edc3	100	68.959	ENSMUSG00000038957	Edc3	100	78.462	Mus_musculus
ENSXMAG00000007377	edc3	100	68.959	MGP_PahariEiJ_G0015146	Edc3	100	78.462	Mus_pahari
ENSXMAG00000007377	edc3	100	68.566	MGP_SPRETEiJ_G0033420	Edc3	100	78.462	Mus_spretus
ENSXMAG00000007377	edc3	100	68.762	ENSMPUG00000017293	EDC3	100	68.762	Mustela_putorius_furo
ENSXMAG00000007377	edc3	100	69.080	ENSMLUG00000016382	EDC3	100	69.080	Myotis_lucifugus
ENSXMAG00000007377	edc3	100	69.745	ENSNGAG00000010923	Edc3	100	69.745	Nannospalax_galili
ENSXMAG00000007377	edc3	100	89.121	ENSNBRG00000002434	edc3	100	89.121	Neolamprologus_brichardi
ENSXMAG00000007377	edc3	100	65.496	ENSNBRG00000007881	EDC3	100	65.496	Neolamprologus_brichardi
ENSXMAG00000007377	edc3	100	59.921	ENSNLEG00000014577	EDC3	100	59.921	Nomascus_leucogenys
ENSXMAG00000007377	edc3	100	69.231	ENSMEUG00000009077	EDC3	100	69.231	Notamacropus_eugenii
ENSXMAG00000007377	edc3	84	79.630	ENSOPRG00000009540	-	79	79.630	Ochotona_princeps
ENSXMAG00000007377	edc3	100	61.509	ENSONIG00000002932	-	100	61.509	Oreochromis_niloticus
ENSXMAG00000007377	edc3	100	89.749	ENSONIG00000008434	edc3	100	89.749	Oreochromis_niloticus
ENSXMAG00000007377	edc3	77	65.743	ENSOCUG00000017740	EDC3	86	65.743	Oryctolagus_cuniculus
ENSXMAG00000007377	edc3	100	63.278	ENSORLG00000014399	-	98	63.278	Oryzias_latipes
ENSXMAG00000007377	edc3	100	87.474	ENSORLG00000004883	edc3	100	87.474	Oryzias_latipes
ENSXMAG00000007377	edc3	100	87.683	ENSORLG00020012262	edc3	100	87.683	Oryzias_latipes_hni
ENSXMAG00000007377	edc3	100	63.278	ENSORLG00020019446	-	100	63.278	Oryzias_latipes_hni
ENSXMAG00000007377	edc3	100	62.857	ENSORLG00015017635	-	96	62.857	Oryzias_latipes_hsok
ENSXMAG00000007377	edc3	100	87.891	ENSORLG00015005634	edc3	100	87.891	Oryzias_latipes_hsok
ENSXMAG00000007377	edc3	100	64.389	ENSOMEG00000017354	EDC3	100	64.389	Oryzias_melastigma
ENSXMAG00000007377	edc3	100	88.912	ENSOMEG00000014026	edc3	100	88.912	Oryzias_melastigma
ENSXMAG00000007377	edc3	100	68.762	ENSOGAG00000014441	EDC3	100	68.959	Otolemur_garnettii
ENSXMAG00000007377	edc3	100	68.627	ENSOARG00000003476	EDC3	100	69.020	Ovis_aries
ENSXMAG00000007377	edc3	100	69.155	ENSPPAG00000040143	EDC3	100	69.155	Pan_paniscus
ENSXMAG00000007377	edc3	100	68.762	ENSPPRG00000006257	EDC3	100	68.762	Panthera_pardus
ENSXMAG00000007377	edc3	100	68.762	ENSPTIG00000017424	EDC3	100	68.762	Panthera_tigris_altaica
ENSXMAG00000007377	edc3	100	69.155	ENSPTRG00000007279	EDC3	100	69.155	Pan_troglodytes
ENSXMAG00000007377	edc3	100	68.959	ENSPANG00000015997	EDC3	100	68.959	Papio_anubis
ENSXMAG00000007377	edc3	100	75.758	ENSPKIG00000019810	EDC3	100	75.758	Paramormyrops_kingsleyae
ENSXMAG00000007377	edc3	100	74.308	ENSPKIG00000004416	edc3	100	74.308	Paramormyrops_kingsleyae
ENSXMAG00000007377	edc3	100	65.422	ENSPSIG00000008474	EDC3	100	65.815	Pelodiscus_sinensis
ENSXMAG00000007377	edc3	100	87.083	ENSPMGG00000007223	edc3	100	87.083	Periophthalmus_magnuspinnatus
ENSXMAG00000007377	edc3	100	69.352	ENSPEMG00000015260	Edc3	100	69.352	Peromyscus_maniculatus_bairdii
ENSXMAG00000007377	edc3	100	69.034	ENSPCIG00000006276	EDC3	70	69.170	Phascolarctos_cinereus
ENSXMAG00000007377	edc3	100	98.117	ENSPFOG00000012204	edc3	100	98.117	Poecilia_formosa
ENSXMAG00000007377	edc3	100	98.117	ENSPLAG00000014420	edc3	100	98.117	Poecilia_latipinna
ENSXMAG00000007377	edc3	100	98.117	ENSPMEG00000023289	edc3	100	98.117	Poecilia_mexicana
ENSXMAG00000007377	edc3	100	98.117	ENSPREG00000016022	edc3	100	98.117	Poecilia_reticulata
ENSXMAG00000007377	edc3	100	68.173	ENSPPYG00000006642	EDC3	100	68.173	Pongo_abelii
ENSXMAG00000007377	edc3	93	79.630	ENSPCAG00000002802	EDC3	88	79.630	Procavia_capensis
ENSXMAG00000007377	edc3	100	69.352	ENSPCOG00000013364	EDC3	100	69.352	Propithecus_coquereli
ENSXMAG00000007377	edc3	100	68.959	ENSPVAG00000014733	EDC3	100	69.216	Pteropus_vampyrus
ENSXMAG00000007377	edc3	100	89.540	ENSPNYG00000021797	edc3	100	89.540	Pundamilia_nyererei
ENSXMAG00000007377	edc3	100	65.217	ENSPNYG00000009669	EDC3	100	65.217	Pundamilia_nyererei
ENSXMAG00000007377	edc3	100	79.365	ENSPNAG00000019657	edc3	100	79.365	Pygocentrus_nattereri
ENSXMAG00000007377	edc3	99	69.170	ENSRNOG00000019579	Edc3	99	69.170	Rattus_norvegicus
ENSXMAG00000007377	edc3	100	68.959	ENSRBIG00000019488	EDC3	100	68.959	Rhinopithecus_bieti
ENSXMAG00000007377	edc3	100	68.959	ENSRROG00000034959	EDC3	100	68.959	Rhinopithecus_roxellana
ENSXMAG00000007377	edc3	100	68.959	ENSSBOG00000004896	EDC3	100	68.959	Saimiri_boliviensis_boliviensis
ENSXMAG00000007377	edc3	96	68.238	ENSSHAG00000015075	EDC3	95	68.238	Sarcophilus_harrisii
ENSXMAG00000007377	edc3	100	78.926	ENSSFOG00015016939	edc3	100	78.926	Scleropages_formosus
ENSXMAG00000007377	edc3	100	72.257	ENSSFOG00015002439	edc3	100	72.464	Scleropages_formosus
ENSXMAG00000007377	edc3	99	65.696	ENSSMAG00000010176	-	99	65.768	Scophthalmus_maximus
ENSXMAG00000007377	edc3	100	89.958	ENSSMAG00000010695	edc3	100	89.958	Scophthalmus_maximus
ENSXMAG00000007377	edc3	100	91.841	ENSSDUG00000021844	edc3	100	91.841	Seriola_dumerili
ENSXMAG00000007377	edc3	100	68.388	ENSSDUG00000007671	EDC3	100	68.388	Seriola_dumerili
ENSXMAG00000007377	edc3	100	92.050	ENSSLDG00000022046	edc3	100	92.050	Seriola_lalandi_dorsalis
ENSXMAG00000007377	edc3	79	78.629	ENSSARG00000003907	EDC3	80	78.629	Sorex_araneus
ENSXMAG00000007377	edc3	100	68.173	ENSSPUG00000008232	EDC3	100	68.173	Sphenodon_punctatus
ENSXMAG00000007377	edc3	100	91.213	ENSSPAG00000010009	edc3	100	91.213	Stegastes_partitus
ENSXMAG00000007377	edc3	100	65.010	ENSSPAG00000020327	EDC3	100	65.289	Stegastes_partitus
ENSXMAG00000007377	edc3	100	71.074	ENSSSCG00000001903	EDC3	100	71.074	Sus_scrofa
ENSXMAG00000007377	edc3	100	69.034	ENSTGUG00000004007	EDC3	100	69.034	Taeniopygia_guttata
ENSXMAG00000007377	edc3	100	88.703	ENSTRUG00000017078	edc3	100	88.703	Takifugu_rubripes
ENSXMAG00000007377	edc3	100	87.708	ENSTNIG00000016047	edc3	100	87.708	Tetraodon_nigroviridis
ENSXMAG00000007377	edc3	100	69.291	ENSTTRG00000007990	EDC3	100	69.291	Tursiops_truncatus
ENSXMAG00000007377	edc3	100	68.566	ENSUAMG00000026710	-	100	68.566	Ursus_americanus
ENSXMAG00000007377	edc3	100	68.566	ENSUMAG00000005006	EDC3	96	68.566	Ursus_maritimus
ENSXMAG00000007377	edc3	84	70.370	ENSVPAG00000003499	-	79	70.370	Vicugna_pacos
ENSXMAG00000007377	edc3	100	68.566	ENSVVUG00000018601	EDC3	100	68.566	Vulpes_vulpes
ENSXMAG00000007377	edc3	72	74.785	ENSXETG00000010622	edc3	99	76.218	Xenopus_tropicalis