EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000007425 (Gene tree)
Gene ID: 102233505
Gene Symbol: riok2
Alias: wu:fe48f07|zgc:55376|zgc:77493
Full Name: RIO kinase 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4559 bases
Position: chr12:18904681-18909239
Accession: 102233505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000007457	RIO1	PF01163.22	3.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000007465	-	2007	XM_005803998	ENSXMAP00000007457	514 (aa)	XP_005804055	M3ZZ13

Gene Model

Click here to download ENSXMAG00000007425's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000007425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000007425	riok2	100	64.855	ENSG00000058729	RIOK2	99	62.319	Homo_sapiens
ENSXMAG00000007425	riok2	100	84.971	ENSAPOG00000011797	riok2	100	84.971	Acanthochromis_polyacanthus
ENSXMAG00000007425	riok2	100	63.148	ENSAMEG00000014615	RIOK2	99	61.896	Ailuropoda_melanoleuca
ENSXMAG00000007425	riok2	79	83.051	ENSACIG00000020646	riok2	89	83.051	Amphilophus_citrinellus
ENSXMAG00000007425	riok2	100	85.742	ENSAOCG00000021840	riok2	100	85.549	Amphiprion_ocellaris
ENSXMAG00000007425	riok2	100	85.549	ENSAPEG00000020853	riok2	100	85.356	Amphiprion_percula
ENSXMAG00000007425	riok2	100	82.319	ENSATEG00000005671	riok2	100	83.650	Anabas_testudineus
ENSXMAG00000007425	riok2	100	65.273	ENSACAG00000011858	RIOK2	59	83.489	Anolis_carolinensis
ENSXMAG00000007425	riok2	100	63.571	ENSANAG00000015977	RIOK2	99	62.681	Aotus_nancymaae
ENSXMAG00000007425	riok2	100	83.365	ENSACLG00000002755	riok2	100	83.460	Astatotilapia_calliptera
ENSXMAG00000007425	riok2	100	75.816	ENSAMXG00000002368	riok2	100	75.432	Astyanax_mexicanus
ENSXMAG00000007425	riok2	100	64.286	ENSBTAG00000011763	RIOK2	77	82.866	Bos_taurus
ENSXMAG00000007425	riok2	60	60.194	WBGene00013688	riok-2	58	60.194	Caenorhabditis_elegans
ENSXMAG00000007425	riok2	100	63.327	ENSCJAG00000040045	RIOK2	99	61.717	Callithrix_jacchus
ENSXMAG00000007425	riok2	100	63.158	ENSCAFG00000007745	RIOK2	77	81.931	Canis_familiaris
ENSXMAG00000007425	riok2	100	62.069	ENSCAFG00020011453	-	77	80.062	Canis_lupus_dingo
ENSXMAG00000007425	riok2	64	70.783	ENSCAFG00020015532	-	84	73.701	Canis_lupus_dingo
ENSXMAG00000007425	riok2	100	66.545	ENSCHIG00000016709	RIOK2	99	64.599	Capra_hircus
ENSXMAG00000007425	riok2	100	63.393	ENSTSYG00000001916	RIOK2	58	81.620	Carlito_syrichta
ENSXMAG00000007425	riok2	96	59.332	ENSCAPG00000006762	RIOK2	100	58.939	Cavia_aperea
ENSXMAG00000007425	riok2	100	61.964	ENSCPOG00000010551	RIOK2	88	81.308	Cavia_porcellus
ENSXMAG00000007425	riok2	100	62.857	ENSCCAG00000025712	RIOK2	99	62.500	Cebus_capucinus
ENSXMAG00000007425	riok2	100	63.571	ENSCATG00000035047	RIOK2	58	82.243	Cercocebus_atys
ENSXMAG00000007425	riok2	100	62.278	ENSCLAG00000006790	RIOK2	77	81.308	Chinchilla_lanigera
ENSXMAG00000007425	riok2	65	58.311	ENSCSAG00000014233	RIOK2	59	81.448	Chlorocebus_sabaeus
ENSXMAG00000007425	riok2	100	63.475	ENSCPBG00000015732	RIOK2	100	58.970	Chrysemys_picta_bellii
ENSXMAG00000007425	riok2	60	69.805	ENSCING00000002364	-	99	51.931	Ciona_intestinalis
ENSXMAG00000007425	riok2	99	50.769	ENSCSAVG00000006970	-	100	50.581	Ciona_savignyi
ENSXMAG00000007425	riok2	100	54.093	ENSCANG00000042169	RIOK2	54	65.944	Colobus_angolensis_palliatus
ENSXMAG00000007425	riok2	100	62.167	ENSCGRG00001000871	Riok2	77	80.374	Cricetulus_griseus_chok1gshd
ENSXMAG00000007425	riok2	100	62.167	ENSCGRG00000008541	Riok2	77	80.374	Cricetulus_griseus_crigri
ENSXMAG00000007425	riok2	100	81.179	ENSCSEG00000014204	riok2	100	81.818	Cynoglossus_semilaevis
ENSXMAG00000007425	riok2	100	88.213	ENSCVAG00000012034	riok2	100	88.213	Cyprinodon_variegatus
ENSXMAG00000007425	riok2	100	75.624	ENSDARG00000035264	riok2	100	76.062	Danio_rerio
ENSXMAG00000007425	riok2	100	64.674	ENSDNOG00000037305	RIOK2	58	82.555	Dasypus_novemcinctus
ENSXMAG00000007425	riok2	100	66.481	ENSDORG00000016345	Riok2	99	63.586	Dipodomys_ordii
ENSXMAG00000007425	riok2	85	53.632	ENSEBUG00000006099	riok2	53	68.667	Eptatretus_burgeri
ENSXMAG00000007425	riok2	100	62.612	ENSECAG00000018441	RIOK2	99	58.230	Equus_caballus
ENSXMAG00000007425	riok2	88	55.102	ENSEEUG00000013535	RIOK2	55	62.500	Erinaceus_europaeus
ENSXMAG00000007425	riok2	78	87.797	ENSELUG00000011239	riok2	95	87.797	Esox_lucius
ENSXMAG00000007425	riok2	100	62.321	ENSFCAG00000024077	RIOK2	58	80.374	Felis_catus
ENSXMAG00000007425	riok2	95	60.264	ENSFALG00000010277	RIOK2	75	79.181	Ficedula_albicollis
ENSXMAG00000007425	riok2	100	63.016	ENSFDAG00000015288	RIOK2	59	81.308	Fukomys_damarensis
ENSXMAG00000007425	riok2	100	90.485	ENSFHEG00000010950	riok2	100	90.874	Fundulus_heteroclitus
ENSXMAG00000007425	riok2	100	75.000	ENSGMOG00000011354	riok2	100	75.240	Gadus_morhua
ENSXMAG00000007425	riok2	100	60.753	ENSGALG00000015288	RIOK2	58	79.560	Gallus_gallus
ENSXMAG00000007425	riok2	100	96.498	ENSGAFG00000012056	riok2	100	96.498	Gambusia_affinis
ENSXMAG00000007425	riok2	100	80.545	ENSGACG00000009754	riok2	100	81.518	Gasterosteus_aculeatus
ENSXMAG00000007425	riok2	100	63.475	ENSGAGG00000013791	RIOK2	58	82.866	Gopherus_agassizii
ENSXMAG00000007425	riok2	100	64.855	ENSGGOG00000022136	RIOK2	58	81.620	Gorilla_gorilla
ENSXMAG00000007425	riok2	100	83.396	ENSHBUG00000010705	riok2	100	83.491	Haplochromis_burtoni
ENSXMAG00000007425	riok2	100	64.000	ENSHGLG00000009139	-	99	63.024	Heterocephalus_glaber_female
ENSXMAG00000007425	riok2	100	64.000	ENSHGLG00100014700	RIOK2	99	63.024	Heterocephalus_glaber_male
ENSXMAG00000007425	riok2	100	79.619	ENSHCOG00000015555	riok2	100	80.230	Hippocampus_comes
ENSXMAG00000007425	riok2	100	72.640	ENSIPUG00000007450	riok2	100	72.832	Ictalurus_punctatus
ENSXMAG00000007425	riok2	100	65.636	ENSSTOG00000006659	RIOK2	58	81.620	Ictidomys_tridecemlineatus
ENSXMAG00000007425	riok2	100	62.956	ENSJJAG00000016582	Riok2	59	81.620	Jaculus_jaculus
ENSXMAG00000007425	riok2	100	86.187	ENSKMAG00000013229	riok2	100	86.770	Kryptolebias_marmoratus
ENSXMAG00000007425	riok2	100	83.779	ENSLBEG00000015421	riok2	100	83.588	Labrus_bergylta
ENSXMAG00000007425	riok2	100	59.232	ENSLACG00000000274	RIOK2	59	74.224	Latimeria_chalumnae
ENSXMAG00000007425	riok2	100	69.943	ENSLOCG00000006432	riok2	100	69.962	Lepisosteus_oculatus
ENSXMAG00000007425	riok2	100	62.500	ENSLAFG00000000919	RIOK2	88	80.685	Loxodonta_africana
ENSXMAG00000007425	riok2	100	63.750	ENSMFAG00000033056	RIOK2	58	81.931	Macaca_fascicularis
ENSXMAG00000007425	riok2	100	63.929	ENSMMUG00000000307	RIOK2	58	81.931	Macaca_mulatta
ENSXMAG00000007425	riok2	100	63.929	ENSMNEG00000029708	RIOK2	58	81.931	Macaca_nemestrina
ENSXMAG00000007425	riok2	88	60.765	ENSMLEG00000040038	RIOK2	53	81.395	Mandrillus_leucophaeus
ENSXMAG00000007425	riok2	100	86.047	ENSMAMG00000013310	riok2	100	86.240	Mastacembelus_armatus
ENSXMAG00000007425	riok2	100	81.716	ENSMZEG00005017067	riok2	100	81.801	Maylandia_zebra
ENSXMAG00000007425	riok2	97	58.867	ENSMGAG00000006986	RIOK2	74	78.618	Meleagris_gallopavo
ENSXMAG00000007425	riok2	76	80.000	ENSMAUG00000019527	Riok2	99	80.000	Mesocricetus_auratus
ENSXMAG00000007425	riok2	100	62.857	ENSMICG00000037437	RIOK2	58	80.685	Microcebus_murinus
ENSXMAG00000007425	riok2	100	65.556	ENSMOCG00000004230	Riok2	99	63.904	Microtus_ochrogaster
ENSXMAG00000007425	riok2	100	83.237	ENSMMOG00000018155	riok2	100	82.466	Mola_mola
ENSXMAG00000007425	riok2	100	62.679	ENSMODG00000015548	RIOK2	88	81.056	Monodelphis_domestica
ENSXMAG00000007425	riok2	100	82.466	ENSMALG00000011266	riok2	100	81.625	Monopterus_albus
ENSXMAG00000007425	riok2	100	64.982	ENSMUSG00000116564	Riok2	100	83.721	Mus_musculus
ENSXMAG00000007425	riok2	100	62.679	ENSMPUG00000004450	RIOK2	77	82.243	Mustela_putorius_furo
ENSXMAG00000007425	riok2	100	64.875	ENSMLUG00000016113	RIOK2	88	82.243	Myotis_lucifugus
ENSXMAG00000007425	riok2	100	64.610	ENSNGAG00000017971	Riok2	77	81.308	Nannospalax_galili
ENSXMAG00000007425	riok2	100	63.214	ENSNLEG00000014474	RIOK2	58	82.243	Nomascus_leucogenys
ENSXMAG00000007425	riok2	96	48.276	ENSMEUG00000010529	RIOK2	100	47.429	Notamacropus_eugenii
ENSXMAG00000007425	riok2	100	83.396	ENSONIG00000013689	riok2	100	83.681	Oreochromis_niloticus
ENSXMAG00000007425	riok2	96	64.540	ENSOANG00000001225	RIOK2	75	83.278	Ornithorhynchus_anatinus
ENSXMAG00000007425	riok2	100	63.571	ENSOCUG00000001656	RIOK2	58	80.997	Oryctolagus_cuniculus
ENSXMAG00000007425	riok2	100	81.274	ENSORLG00020011553	riok2	100	82.046	Oryzias_latipes_hni
ENSXMAG00000007425	riok2	100	81.274	ENSORLG00015001085	riok2	100	81.044	Oryzias_latipes_hsok
ENSXMAG00000007425	riok2	100	82.046	ENSOMEG00000004617	riok2	100	82.432	Oryzias_melastigma
ENSXMAG00000007425	riok2	100	61.121	ENSOGAG00000008467	RIOK2	77	79.439	Otolemur_garnettii
ENSXMAG00000007425	riok2	100	64.821	ENSOARG00000018138	RIOK2	58	82.866	Ovis_aries
ENSXMAG00000007425	riok2	100	60.252	ENSPPAG00000027414	RIOK2	89	64.541	Pan_paniscus
ENSXMAG00000007425	riok2	100	62.679	ENSPPRG00000000169	RIOK2	77	80.374	Panthera_pardus
ENSXMAG00000007425	riok2	100	63.036	ENSPTIG00000008344	RIOK2	77	80.685	Panthera_tigris_altaica
ENSXMAG00000007425	riok2	100	63.036	ENSPTRG00000017100	RIOK2	77	81.308	Pan_troglodytes
ENSXMAG00000007425	riok2	100	63.750	ENSPANG00000011977	RIOK2	58	81.931	Papio_anubis
ENSXMAG00000007425	riok2	100	70.950	ENSPKIG00000016220	riok2	100	71.508	Paramormyrops_kingsleyae
ENSXMAG00000007425	riok2	100	63.016	ENSPSIG00000013238	RIOK2	58	81.931	Pelodiscus_sinensis
ENSXMAG00000007425	riok2	100	79.377	ENSPMGG00000021822	riok2	100	79.377	Periophthalmus_magnuspinnatus
ENSXMAG00000007425	riok2	100	63.768	ENSPEMG00000018872	Riok2	58	80.997	Peromyscus_maniculatus_bairdii
ENSXMAG00000007425	riok2	100	96.505	ENSPFOG00000017064	riok2	100	96.505	Poecilia_formosa
ENSXMAG00000007425	riok2	100	96.538	ENSPLAG00000003043	riok2	100	96.538	Poecilia_latipinna
ENSXMAG00000007425	riok2	100	96.538	ENSPMEG00000007622	riok2	100	96.538	Poecilia_mexicana
ENSXMAG00000007425	riok2	100	95.192	ENSPREG00000002255	riok2	100	95.962	Poecilia_reticulata
ENSXMAG00000007425	riok2	100	64.312	ENSPPYG00000015654	RIOK2	77	80.997	Pongo_abelii
ENSXMAG00000007425	riok2	100	63.472	ENSPCAG00000006508	RIOK2	58	80.997	Procavia_capensis
ENSXMAG00000007425	riok2	100	62.923	ENSPCOG00000024315	RIOK2	58	80.374	Propithecus_coquereli
ENSXMAG00000007425	riok2	82	79.472	ENSPVAG00000016658	RIOK2	73	81.620	Pteropus_vampyrus
ENSXMAG00000007425	riok2	100	83.333	ENSPNYG00000018868	riok2	100	83.429	Pundamilia_nyererei
ENSXMAG00000007425	riok2	100	74.806	ENSPNAG00000010841	riok2	100	74.369	Pygocentrus_nattereri
ENSXMAG00000007425	riok2	100	64.222	ENSRNOG00000012692	Riok2	58	81.308	Rattus_norvegicus
ENSXMAG00000007425	riok2	99	64.973	ENSRBIG00000030658	RIOK2	58	81.931	Rhinopithecus_bieti
ENSXMAG00000007425	riok2	99	64.791	ENSRROG00000039203	RIOK2	58	81.875	Rhinopithecus_roxellana
ENSXMAG00000007425	riok2	73	42.439	YNL207W	-	82	45.272	Saccharomyces_cerevisiae
ENSXMAG00000007425	riok2	100	63.393	ENSSBOG00000032152	RIOK2	99	62.681	Saimiri_boliviensis_boliviensis
ENSXMAG00000007425	riok2	100	63.214	ENSSHAG00000006935	-	76	82.243	Sarcophilus_harrisii
ENSXMAG00000007425	riok2	100	71.534	ENSSFOG00015005966	riok2	100	71.508	Scleropages_formosus
ENSXMAG00000007425	riok2	100	84.302	ENSSMAG00000010529	riok2	100	84.690	Scophthalmus_maximus
ENSXMAG00000007425	riok2	100	87.283	ENSSDUG00000014891	riok2	100	86.705	Seriola_dumerili
ENSXMAG00000007425	riok2	100	86.898	ENSSLDG00000001926	riok2	100	86.705	Seriola_lalandi_dorsalis
ENSXMAG00000007425	riok2	100	58.595	ENSSARG00000001798	RIOK2	99	57.463	Sorex_araneus
ENSXMAG00000007425	riok2	70	69.657	ENSSPUG00000003509	RIOK2	77	78.505	Sphenodon_punctatus
ENSXMAG00000007425	riok2	100	80.036	ENSSPAG00000016554	riok2	100	84.818	Stegastes_partitus
ENSXMAG00000007425	riok2	100	60.573	ENSTGUG00000001223	RIOK2	100	59.855	Taeniopygia_guttata
ENSXMAG00000007425	riok2	100	81.143	ENSTRUG00000011455	riok2	100	81.524	Takifugu_rubripes
ENSXMAG00000007425	riok2	79	78.870	ENSTNIG00000015401	riok2	100	79.607	Tetraodon_nigroviridis
ENSXMAG00000007425	riok2	100	61.607	ENSTTRG00000010640	RIOK2	77	78.193	Tursiops_truncatus
ENSXMAG00000007425	riok2	95	62.127	ENSUAMG00000008585	RIOK2	87	81.818	Ursus_americanus
ENSXMAG00000007425	riok2	100	62.857	ENSUMAG00000006726	RIOK2	87	81.931	Ursus_maritimus
ENSXMAG00000007425	riok2	100	62.929	ENSVVUG00000020170	RIOK2	77	81.620	Vulpes_vulpes
ENSXMAG00000007425	riok2	100	65.809	ENSXETG00000013194	riok2	59	83.178	Xenopus_tropicalis
ENSXMAG00000007425	riok2	100	99.611	ENSXCOG00000016879	riok2	100	99.611	Xiphophorus_couchianus