EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000007614 (Gene tree)
Gene ID: 102229287
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 64486 bases
Position: chr6:20277590-20342075
Accession: 102229287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000007640	RRM_1	PF00076.22	5.7e-13	1	1
ENSXMAP00000037302	RRM_1	PF00076.22	6.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000007648	-	1874	XM_023336110	ENSXMAP00000007640	292 (aa)	XP_023191878	M3ZZJ6
ENSXMAT00000032525	-	1934	XM_023336107	ENSXMAP00000037302	312 (aa)	XP_023191875	UPI0003B43827

Gene Model

Click here to download ENSXMAG00000007614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000007614's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000007614	-	100	92.808	ENSAPOG00000008744	-	100	92.808	Acanthochromis_polyacanthus
ENSXMAG00000007614	-	97	83.505	ENSACIG00000007143	-	97	83.505	Amphilophus_citrinellus
ENSXMAG00000007614	-	100	73.986	ENSAOCG00000001605	-	100	73.986	Amphiprion_ocellaris
ENSXMAG00000007614	-	100	94.863	ENSAOCG00000023599	-	100	94.863	Amphiprion_ocellaris
ENSXMAG00000007614	-	86	72.510	ENSATEG00000023356	-	96	72.510	Anabas_testudineus
ENSXMAG00000007614	-	97	84.407	ENSATEG00000022219	-	93	88.814	Anabas_testudineus
ENSXMAG00000007614	-	100	72.973	ENSACLG00000006949	-	100	72.973	Astatotilapia_calliptera
ENSXMAG00000007614	-	100	94.178	ENSACLG00000011720	-	100	94.178	Astatotilapia_calliptera
ENSXMAG00000007614	-	100	63.423	ENSAMXG00000032617	-	100	64.094	Astyanax_mexicanus
ENSXMAG00000007614	-	100	72.635	ENSAMXG00000019031	-	100	72.635	Astyanax_mexicanus
ENSXMAG00000007614	-	100	81.507	ENSCSEG00000014237	-	100	81.507	Cynoglossus_semilaevis
ENSXMAG00000007614	-	100	95.205	ENSCVAG00000013624	-	100	95.205	Cyprinodon_variegatus
ENSXMAG00000007614	-	100	73.986	ENSCVAG00000018104	-	100	74.324	Cyprinodon_variegatus
ENSXMAG00000007614	-	59	76.608	ENSDARG00000090292	ralyl	81	79.630	Danio_rerio
ENSXMAG00000007614	-	93	62.909	ENSELUG00000001702	-	96	62.724	Esox_lucius
ENSXMAG00000007614	-	57	73.939	ENSGMOG00000005914	-	100	73.939	Gadus_morhua
ENSXMAG00000007614	-	61	79.213	ENSGACG00000004991	-	91	83.133	Gasterosteus_aculeatus
ENSXMAG00000007614	-	100	94.521	ENSHBUG00000010040	-	100	94.521	Haplochromis_burtoni
ENSXMAG00000007614	-	100	72.973	ENSHBUG00000015412	-	100	72.973	Haplochromis_burtoni
ENSXMAG00000007614	-	100	72.635	ENSIPUG00000000507	ralyl	100	73.649	Ictalurus_punctatus
ENSXMAG00000007614	-	100	90.753	ENSKMAG00000022093	-	100	91.438	Kryptolebias_marmoratus
ENSXMAG00000007614	-	100	73.311	ENSKMAG00000018155	-	100	74.324	Kryptolebias_marmoratus
ENSXMAG00000007614	-	100	90.068	ENSLBEG00000012873	-	100	90.068	Labrus_bergylta
ENSXMAG00000007614	-	100	72.054	ENSLBEG00000011011	-	100	72.297	Labrus_bergylta
ENSXMAG00000007614	-	100	70.270	ENSLOCG00000012787	ralyl	99	69.257	Lepisosteus_oculatus
ENSXMAG00000007614	-	99	87.241	ENSMAMG00000001723	-	97	87.241	Mastacembelus_armatus
ENSXMAG00000007614	-	98	71.525	ENSMZEG00005018748	-	99	71.525	Maylandia_zebra
ENSXMAG00000007614	-	100	94.178	ENSMZEG00005024447	-	100	94.178	Maylandia_zebra
ENSXMAG00000007614	-	97	83.446	ENSMMOG00000020441	-	86	85.135	Mola_mola
ENSXMAG00000007614	-	100	92.123	ENSMALG00000019019	-	78	92.123	Monopterus_albus
ENSXMAG00000007614	-	100	71.959	ENSMALG00000012952	-	100	71.959	Monopterus_albus
ENSXMAG00000007614	-	98	71.525	ENSNBRG00000011376	-	99	71.525	Neolamprologus_brichardi
ENSXMAG00000007614	-	97	83.849	ENSNBRG00000011206	-	97	83.849	Neolamprologus_brichardi
ENSXMAG00000007614	-	100	87.671	ENSORLG00000017934	-	100	87.329	Oryzias_latipes
ENSXMAG00000007614	-	100	74.324	ENSORLG00000012719	-	100	74.324	Oryzias_latipes
ENSXMAG00000007614	-	100	74.324	ENSORLG00020004438	-	100	74.324	Oryzias_latipes_hni
ENSXMAG00000007614	-	100	86.644	ENSORLG00020000082	-	100	86.301	Oryzias_latipes_hni
ENSXMAG00000007614	-	100	74.662	ENSORLG00015004727	-	100	74.662	Oryzias_latipes_hsok
ENSXMAG00000007614	-	100	86.986	ENSORLG00015004280	-	100	86.644	Oryzias_latipes_hsok
ENSXMAG00000007614	-	100	88.699	ENSOMEG00000011821	-	100	88.699	Oryzias_melastigma
ENSXMAG00000007614	-	100	73.986	ENSOMEG00000001170	-	100	73.986	Oryzias_melastigma
ENSXMAG00000007614	-	100	73.720	ENSPKIG00000015926	-	100	73.720	Paramormyrops_kingsleyae
ENSXMAG00000007614	-	99	74.662	ENSPMGG00000009532	-	99	72.973	Periophthalmus_magnuspinnatus
ENSXMAG00000007614	-	78	67.811	ENSPMGG00000014481	-	95	69.828	Periophthalmus_magnuspinnatus
ENSXMAG00000007614	-	97	93.878	ENSPFOG00000006120	-	99	93.878	Poecilia_formosa
ENSXMAG00000007614	-	97	89.437	ENSPLAG00000009877	-	76	89.437	Poecilia_latipinna
ENSXMAG00000007614	-	97	73.448	ENSPLAG00000011323	ralyl	100	73.448	Poecilia_latipinna
ENSXMAG00000007614	-	97	89.437	ENSPMEG00000013624	-	79	89.437	Poecilia_mexicana
ENSXMAG00000007614	-	97	73.448	ENSPMEG00000023847	ralyl	100	73.448	Poecilia_mexicana
ENSXMAG00000007614	-	97	72.414	ENSPREG00000001956	ralyl	100	72.414	Poecilia_reticulata
ENSXMAG00000007614	-	100	99.038	ENSPREG00000013805	-	100	99.038	Poecilia_reticulata
ENSXMAG00000007614	-	98	71.525	ENSPNYG00000003548	-	99	71.525	Pundamilia_nyererei
ENSXMAG00000007614	-	97	83.849	ENSPNYG00000008772	-	97	83.849	Pundamilia_nyererei
ENSXMAG00000007614	-	100	72.297	ENSPNAG00000000498	-	88	72.054	Pygocentrus_nattereri
ENSXMAG00000007614	-	100	66.438	ENSPNAG00000026098	-	100	66.438	Pygocentrus_nattereri
ENSXMAG00000007614	-	100	59.661	ENSSFOG00015004575	-	96	65.385	Scleropages_formosus
ENSXMAG00000007614	-	100	73.986	ENSSFOG00015009401	-	100	73.986	Scleropages_formosus
ENSXMAG00000007614	-	100	72.635	ENSSMAG00000005608	-	100	73.737	Scophthalmus_maximus
ENSXMAG00000007614	-	97	87.368	ENSSMAG00000015907	-	93	87.368	Scophthalmus_maximus
ENSXMAG00000007614	-	100	94.521	ENSSDUG00000012473	-	100	94.521	Seriola_dumerili
ENSXMAG00000007614	-	100	73.649	ENSSDUG00000007587	-	100	73.649	Seriola_dumerili
ENSXMAG00000007614	-	100	73.064	ENSSLDG00000020603	-	100	73.064	Seriola_lalandi_dorsalis
ENSXMAG00000007614	-	100	94.178	ENSSLDG00000011534	-	100	94.178	Seriola_lalandi_dorsalis
ENSXMAG00000007614	-	100	77.397	ENSSPAG00000013858	-	96	77.397	Stegastes_partitus
ENSXMAG00000007614	-	97	87.986	ENSTRUG00000003829	-	95	86.219	Takifugu_rubripes
ENSXMAG00000007614	-	97	83.673	ENSTNIG00000005594	-	99	83.673	Tetraodon_nigroviridis
ENSXMAG00000007614	-	100	64.430	ENSXETG00000017729	ralyl	99	64.094	Xenopus_tropicalis
ENSXMAG00000007614	-	97	71.141	ENSXCOG00000015156	-	93	71.141	Xiphophorus_couchianus
ENSXMAG00000007614	-	100	74.324	ENSXMAG00000008396	-	100	74.324	Xiphophorus_maculatus