EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000007723 (Gene tree)
Gene ID
102222745
Gene Symbol
polr1b
Alias
wu:fc91a05|zgc:66298
Full Name
RNA polymerase I subunit B
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Minus strand
Length
12077 bases
Position
chr22:245985-258061
Accession
102222745
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000007759RNA_pol_Rpa2_4PF06883.128.2e-2211
ENSXMAP00000007759RNA_pol_Rpb2_1PF04563.152.6e-3611
ENSXMAP00000007759RNA_pol_Rpb2_2PF04561.143e-0811
ENSXMAP00000007759RNA_pol_Rpb2_3PF04565.163.5e-2811
ENSXMAP00000007759RNA_pol_Rpb2_7PF04560.202.5e-2111
ENSXMAP00000007759RNA_pol_Rpb2_6PF00562.281.4e-11311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000007767-3729XM_005795178ENSXMAP000000077591134 (aa)XP_005795235M3ZZW5
Gene Model
Click here to download ENSXMAG00000007723's gene model file
Pathways
Pathway IDPathway NameSource
xma03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000007723's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000007723polr1b9976.102ENSG00000125630POLR1B9982.609Homo_sapiens
ENSXMAG00000007723polr1b10087.831ENSAPOG00000000931polr1b10087.831Acanthochromis_polyacanthus
ENSXMAG00000007723polr1b9130.328ENSAPOG00000018360polr3b9830.328Acanthochromis_polyacanthus
ENSXMAG00000007723polr1b9976.102ENSAMEG00000010826POLR1B9976.102Ailuropoda_melanoleuca
ENSXMAG00000007723polr1b10087.743ENSACIG00000002290polr1b10087.743Amphilophus_citrinellus
ENSXMAG00000007723polr1b10087.478ENSAOCG00000004249polr1b10087.478Amphiprion_ocellaris
ENSXMAG00000007723polr1b10087.566ENSAPEG00000004971polr1b10087.566Amphiprion_percula
ENSXMAG00000007723polr1b9130.176ENSAPEG00000006829polr3b9330.176Amphiprion_percula
ENSXMAG00000007723polr1b10087.919ENSATEG00000010957polr1b10087.919Anabas_testudineus
ENSXMAG00000007723polr1b9468.785ENSAPLG00000004142POLR1B9968.785Anas_platyrhynchos
ENSXMAG00000007723polr1b5168.611ENSACAG00000005660POLR1B9968.611Anolis_carolinensis
ENSXMAG00000007723polr1b6178.871ENSACAG00000007117-9979.161Anolis_carolinensis
ENSXMAG00000007723polr1b9976.123ENSANAG00000026201POLR1B9981.917Aotus_nancymaae
ENSXMAG00000007723polr1b10088.183ENSACLG00000019089polr1b10088.183Astatotilapia_calliptera
ENSXMAG00000007723polr1b10081.305ENSAMXG00000037818polr1b10081.305Astyanax_mexicanus
ENSXMAG00000007723polr1b9975.838ENSBTAG00000014166POLR1B9975.838Bos_taurus
ENSXMAG00000007723polr1b9745.325WBGene00008781rpoa-29945.325Caenorhabditis_elegans
ENSXMAG00000007723polr1b9976.014ENSCJAG00000016433POLR1B9982.246Callithrix_jacchus
ENSXMAG00000007723polr1b9975.838ENSCAFG00000007174POLR1B9975.838Canis_familiaris
ENSXMAG00000007723polr1b9975.926ENSCAFG00020017367POLR1B9975.926Canis_lupus_dingo
ENSXMAG00000007723polr1b9976.014ENSCHIG00000014527POLR1B9976.014Capra_hircus
ENSXMAG00000007723polr1b9974.868ENSTSYG00000003669POLR1B9980.072Carlito_syrichta
ENSXMAG00000007723polr1b9083.289ENSCAPG00000012821POLR1B8583.289Cavia_aperea
ENSXMAG00000007723polr1b9974.956ENSCPOG00000015744POLR1B9974.956Cavia_porcellus
ENSXMAG00000007723polr1b9976.279ENSCCAG00000035252POLR1B9982.246Cebus_capucinus
ENSXMAG00000007723polr1b7933.333ENSCATG00000035334POLR3B8533.333Cercocebus_atys
ENSXMAG00000007723polr1b9976.102ENSCATG00000037382POLR1B9982.428Cercocebus_atys
ENSXMAG00000007723polr1b9975.132ENSCLAG00000004899POLR1B9975.132Chinchilla_lanigera
ENSXMAG00000007723polr1b9976.279ENSCSAG00000016783POLR1B9976.279Chlorocebus_sabaeus
ENSXMAG00000007723polr1b8577.423ENSCHOG00000007229POLR1B9977.423Choloepus_hoffmanni
ENSXMAG00000007723polr1b9578.977ENSCPBG00000003962POLR1B9979.874Chrysemys_picta_bellii
ENSXMAG00000007723polr1b9954.329ENSCING00000003329-9954.329Ciona_intestinalis
ENSXMAG00000007723polr1b9041.053ENSCSAVG00000000129-8341.053Ciona_savignyi
ENSXMAG00000007723polr1b7433.931ENSCSAVG00000007982-8831.842Ciona_savignyi
ENSXMAG00000007723polr1b9976.014ENSCANG00000039531POLR1B9981.884Colobus_angolensis_palliatus
ENSXMAG00000007723polr1b9975.309ENSCGRG00001014254Polr1b9975.309Cricetulus_griseus_chok1gshd
ENSXMAG00000007723polr1b9975.220ENSCGRG00000017847Polr1b9975.220Cricetulus_griseus_crigri
ENSXMAG00000007723polr1b10084.656ENSCSEG00000008564polr1b10084.656Cynoglossus_semilaevis
ENSXMAG00000007723polr1b10091.799ENSCVAG00000005824polr1b10091.799Cyprinodon_variegatus
ENSXMAG00000007723polr1b9980.425ENSDARG00000077469polr1b9980.425Danio_rerio
ENSXMAG00000007723polr1b9975.625ENSDNOG00000017718POLR1B9875.573Dasypus_novemcinctus
ENSXMAG00000007723polr1b9975.044ENSDORG00000014309Polr1b9975.044Dipodomys_ordii
ENSXMAG00000007723polr1b9845.398FBgn0003278RpI1359845.398Drosophila_melanogaster
ENSXMAG00000007723polr1b5733.770ENSETEG00000017715POLR3B6133.770Echinops_telfairi
ENSXMAG00000007723polr1b8979.006ENSETEG00000004001POLR1B8979.006Echinops_telfairi
ENSXMAG00000007723polr1b5636.628ENSETEG00000011734POLR2B5636.628Echinops_telfairi
ENSXMAG00000007723polr1b6370.748ENSEBUG00000015791polr1b9770.748Eptatretus_burgeri
ENSXMAG00000007723polr1b6232.215ENSEBUG00000010186-6832.215Eptatretus_burgeri
ENSXMAG00000007723polr1b8742.623ENSEASG00005021189POLR3B9242.623Equus_asinus_asinus
ENSXMAG00000007723polr1b9975.838ENSEASG00005006504POLR1B9975.838Equus_asinus_asinus
ENSXMAG00000007723polr1b7533.289ENSECAG00000019086POLR3B7833.289Equus_caballus
ENSXMAG00000007723polr1b9975.838ENSECAG00000010062POLR1B9975.838Equus_caballus
ENSXMAG00000007723polr1b7688.356ENSEEUG00000004559-8088.356Erinaceus_europaeus
ENSXMAG00000007723polr1b7433.000ENSEEUG00000009798POLR2B7533.000Erinaceus_europaeus
ENSXMAG00000007723polr1b10082.716ENSELUG00000019627polr1b10082.716Esox_lucius
ENSXMAG00000007723polr1b9130.284ENSELUG00000023988polr3b9530.284Esox_lucius
ENSXMAG00000007723polr1b9976.102ENSFCAG00000008091POLR1B9981.522Felis_catus
ENSXMAG00000007723polr1b8969.535ENSFALG00000000717POLR1B10069.535Ficedula_albicollis
ENSXMAG00000007723polr1b9974.868ENSFDAG00000020976POLR1B9974.868Fukomys_damarensis
ENSXMAG00000007723polr1b8688.917ENSFHEG00000000533polr1b9388.917Fundulus_heteroclitus
ENSXMAG00000007723polr1b7341.497ENSFHEG00000008215polr3b7541.497Fundulus_heteroclitus
ENSXMAG00000007723polr1b9272.823ENSGMOG00000005847polr1b10072.823Gadus_morhua
ENSXMAG00000007723polr1b9568.744ENSGALG00000032273POLR1B9668.744Gallus_gallus
ENSXMAG00000007723polr1b10097.884ENSGAFG00000001383polr1b10097.884Gambusia_affinis
ENSXMAG00000007723polr1b10084.595ENSGACG00000003012polr1b10084.595Gasterosteus_aculeatus
ENSXMAG00000007723polr1b9578.326ENSGAGG00000016312POLR1B9978.995Gopherus_agassizii
ENSXMAG00000007723polr1b9975.926ENSGGOG00000013494POLR1B9982.428Gorilla_gorilla
ENSXMAG00000007723polr1b10088.183ENSHBUG00000012650polr1b10088.183Haplochromis_burtoni
ENSXMAG00000007723polr1b9974.691ENSHGLG00000011497POLR1B9974.691Heterocephalus_glaber_female
ENSXMAG00000007723polr1b9974.074ENSHGLG00100009371POLR1B9974.074Heterocephalus_glaber_male
ENSXMAG00000007723polr1b10080.247ENSHCOG00000000709polr1b10080.247Hippocampus_comes
ENSXMAG00000007723polr1b10082.011ENSIPUG00000018216polr1b10082.011Ictalurus_punctatus
ENSXMAG00000007723polr1b9130.082ENSIPUG00000016720Polr3b9630.082Ictalurus_punctatus
ENSXMAG00000007723polr1b9577.002ENSSTOG00000008160POLR1B9977.002Ictidomys_tridecemlineatus
ENSXMAG00000007723polr1b9969.894ENSJJAG00000000143Polr1b9969.894Jaculus_jaculus
ENSXMAG00000007723polr1b10087.566ENSKMAG00000016037polr1b10087.566Kryptolebias_marmoratus
ENSXMAG00000007723polr1b10081.393ENSLBEG00000027396polr1b10081.658Labrus_bergylta
ENSXMAG00000007723polr1b10078.502ENSLACG00000009481POLR1B10078.502Latimeria_chalumnae
ENSXMAG00000007723polr1b9981.122ENSLOCG00000016558polr1b9981.122Lepisosteus_oculatus
ENSXMAG00000007723polr1b9975.286ENSLAFG00000007659POLR1B9981.193Loxodonta_africana
ENSXMAG00000007723polr1b9976.208ENSMFAG00000032912POLR1B9982.246Macaca_fascicularis
ENSXMAG00000007723polr1b8533.379ENSMFAG00000038425POLR3B8933.379Macaca_fascicularis
ENSXMAG00000007723polr1b9976.208ENSMMUG00000009468POLR1B9982.246Macaca_mulatta
ENSXMAG00000007723polr1b9976.102ENSMNEG00000036047POLR1B9982.246Macaca_nemestrina
ENSXMAG00000007723polr1b9972.751ENSMLEG00000030588POLR1B9982.428Mandrillus_leucophaeus
ENSXMAG00000007723polr1b10087.654ENSMAMG00000013118polr1b10087.654Mastacembelus_armatus
ENSXMAG00000007723polr1b10088.183ENSMZEG00005011850polr1b10088.183Maylandia_zebra
ENSXMAG00000007723polr1b9269.799ENSMGAG00000007074POLR1B9969.799Meleagris_gallopavo
ENSXMAG00000007723polr1b8473.677ENSMAUG00000010593Polr1b9673.677Mesocricetus_auratus
ENSXMAG00000007723polr1b9975.838ENSMICG00000013245POLR1B9975.838Microcebus_murinus
ENSXMAG00000007723polr1b9975.309ENSMOCG00000005942Polr1b9975.309Microtus_ochrogaster
ENSXMAG00000007723polr1b10085.991ENSMMOG00000008388polr1b10085.991Mola_mola
ENSXMAG00000007723polr1b9977.690ENSMODG00000006573POLR1B9977.690Monodelphis_domestica
ENSXMAG00000007723polr1b10084.744ENSMALG00000008958polr1b10084.744Monopterus_albus
ENSXMAG00000007723polr1b9576.651MGP_CAROLIEiJ_G0024281Polr1b9976.651Mus_caroli
ENSXMAG00000007723polr1b9974.603ENSMUSG00000027395Polr1b9974.603Mus_musculus
ENSXMAG00000007723polr1b8638.123MGP_PahariEiJ_G0031407Polr3b8838.123Mus_pahari
ENSXMAG00000007723polr1b9975.661MGP_PahariEiJ_G0025726Polr1b9975.661Mus_pahari
ENSXMAG00000007723polr1b9974.780MGP_SPRETEiJ_G0025201Polr1b9974.780Mus_spretus
ENSXMAG00000007723polr1b9972.310ENSMPUG00000009644POLR1B9972.310Mustela_putorius_furo
ENSXMAG00000007723polr1b9976.455ENSMLUG00000004910POLR1B9976.455Myotis_lucifugus
ENSXMAG00000007723polr1b9975.397ENSNGAG00000021472Polr1b9975.397Nannospalax_galili
ENSXMAG00000007723polr1b10088.007ENSNBRG00000017979polr1b10088.007Neolamprologus_brichardi
ENSXMAG00000007723polr1b9972.928ENSNLEG00000001656POLR1B9982.065Nomascus_leucogenys
ENSXMAG00000007723polr1b6030.233ENSMEUG00000002576POLR3B6230.233Notamacropus_eugenii
ENSXMAG00000007723polr1b7580.080ENSMEUG00000013915POLR1B7580.080Notamacropus_eugenii
ENSXMAG00000007723polr1b9974.868ENSOPRG00000012742POLR1B9974.868Ochotona_princeps
ENSXMAG00000007723polr1b5538.136ENSOPRG00000008568POLR3B5538.136Ochotona_princeps
ENSXMAG00000007723polr1b9969.224ENSODEG00000005501POLR1B9969.224Octodon_degus
ENSXMAG00000007723polr1b10088.272ENSONIG00000010382polr1b10088.272Oreochromis_niloticus
ENSXMAG00000007723polr1b9279.504ENSOANG00000003621POLR1B9979.504Ornithorhynchus_anatinus
ENSXMAG00000007723polr1b9975.926ENSOCUG00000006058POLR1B9975.926Oryctolagus_cuniculus
ENSXMAG00000007723polr1b10087.665ENSORLG00000000890polr1b10087.665Oryzias_latipes
ENSXMAG00000007723polr1b10087.665ENSORLG00015011105polr1b10087.665Oryzias_latipes_hsok
ENSXMAG00000007723polr1b10086.960ENSOMEG00000005073polr1b10086.960Oryzias_melastigma
ENSXMAG00000007723polr1b9975.926ENSOGAG00000007367POLR1B9775.926Otolemur_garnettii
ENSXMAG00000007723polr1b9976.035ENSOARG00000020904POLR1B9976.035Ovis_aries
ENSXMAG00000007723polr1b9976.014ENSPPAG00000002774POLR1B9982.428Pan_paniscus
ENSXMAG00000007723polr1b9976.367ENSPPRG00000005760POLR1B9981.703Panthera_pardus
ENSXMAG00000007723polr1b9976.367ENSPTIG00000013496POLR1B9981.703Panthera_tigris_altaica
ENSXMAG00000007723polr1b9976.014ENSPTRG00000012366POLR1B9982.246Pan_troglodytes
ENSXMAG00000007723polr1b9976.102ENSPANG00000023423POLR1B9982.428Papio_anubis
ENSXMAG00000007723polr1b10078.307ENSPKIG00000007536polr1b10078.307Paramormyrops_kingsleyae
ENSXMAG00000007723polr1b9154.762ENSPKIG00000000008polr2b8854.762Paramormyrops_kingsleyae
ENSXMAG00000007723polr1b9130.009ENSPKIG00000025403polr3b9630.009Paramormyrops_kingsleyae
ENSXMAG00000007723polr1b9678.165ENSPSIG00000002443POLR1B9978.165Pelodiscus_sinensis
ENSXMAG00000007723polr1b10083.510ENSPMGG00000021622polr1b10083.510Periophthalmus_magnuspinnatus
ENSXMAG00000007723polr1b9183.664ENSPEMG00000008619Polr1b9383.664Peromyscus_maniculatus_bairdii
ENSXMAG00000007723polr1b7030.491ENSPMAG00000001164-9330.491Petromyzon_marinus
ENSXMAG00000007723polr1b7533.154ENSPCIG00000009510POLR3B7833.154Phascolarctos_cinereus
ENSXMAG00000007723polr1b9977.601ENSPCIG00000029738POLR1B9577.601Phascolarctos_cinereus
ENSXMAG00000007723polr1b10097.884ENSPFOG00000010484polr1b10097.884Poecilia_formosa
ENSXMAG00000007723polr1b10098.060ENSPLAG00000007518polr1b10098.060Poecilia_latipinna
ENSXMAG00000007723polr1b7633.201ENSPLAG00000015107polr3b8033.201Poecilia_latipinna
ENSXMAG00000007723polr1b10097.795ENSPMEG00000006810polr1b10097.795Poecilia_mexicana
ENSXMAG00000007723polr1b10097.443ENSPREG00000002867polr1b10097.443Poecilia_reticulata
ENSXMAG00000007723polr1b9975.926ENSPPYG00000012168POLR1B9975.926Pongo_abelii
ENSXMAG00000007723polr1b9966.784ENSPCAG00000013293POLR1B9966.784Procavia_capensis
ENSXMAG00000007723polr1b7148.819ENSPCAG00000000881POLR3B7248.819Procavia_capensis
ENSXMAG00000007723polr1b5533.333ENSPCOG00000014476POLR3B6333.333Propithecus_coquereli
ENSXMAG00000007723polr1b9975.573ENSPCOG00000015852POLR1B9675.573Propithecus_coquereli
ENSXMAG00000007723polr1b8137.831ENSPVAG00000010951POLR2B7937.831Pteropus_vampyrus
ENSXMAG00000007723polr1b6938.123ENSPVAG00000005861POLR3B6738.123Pteropus_vampyrus
ENSXMAG00000007723polr1b9272.020ENSPVAG00000005727POLR1B9272.020Pteropus_vampyrus
ENSXMAG00000007723polr1b10088.007ENSPNYG00000004767polr1b10088.007Pundamilia_nyererei
ENSXMAG00000007723polr1b10081.746ENSPNAG00000013503polr1b9581.746Pygocentrus_nattereri
ENSXMAG00000007723polr1b9970.348ENSRNOG00000018349Polr1b9970.348Rattus_norvegicus
ENSXMAG00000007723polr1b9976.102ENSRBIG00000019757POLR1B9982.246Rhinopithecus_bieti
ENSXMAG00000007723polr1b9842.712YPR010CRPA1359742.712Saccharomyces_cerevisiae
ENSXMAG00000007723polr1b9976.014ENSSBOG00000024562POLR1B9982.065Saimiri_boliviensis_boliviensis
ENSXMAG00000007723polr1b10076.728ENSSFOG00015004632polr1b10076.728Scleropages_formosus
ENSXMAG00000007723polr1b10086.861ENSSMAG00000013682polr1b10086.861Scophthalmus_maximus
ENSXMAG00000007723polr1b10087.743ENSSDUG00000019471polr1b10087.743Seriola_dumerili
ENSXMAG00000007723polr1b6937.687ENSSARG00000013960POLR3B8337.687Sorex_araneus
ENSXMAG00000007723polr1b8177.381ENSSPUG00000014298POLR1B10077.381Sphenodon_punctatus
ENSXMAG00000007723polr1b10088.360ENSSPAG00000006345polr1b10088.360Stegastes_partitus
ENSXMAG00000007723polr1b9976.455ENSSSCG00000008098POLR1B9972.663Sus_scrofa
ENSXMAG00000007723polr1b9169.691ENSTGUG00000005237POLR1B10069.691Taeniopygia_guttata
ENSXMAG00000007723polr1b10082.981ENSTRUG00000006581polr1b10082.981Takifugu_rubripes
ENSXMAG00000007723polr1b9982.890ENSTNIG00000002722polr1b9982.890Tetraodon_nigroviridis
ENSXMAG00000007723polr1b7341.837ENSTBEG00000017278POLR3B7141.837Tupaia_belangeri
ENSXMAG00000007723polr1b9976.190ENSTTRG00000010988POLR1B9976.190Tursiops_truncatus
ENSXMAG00000007723polr1b8633.603ENSTTRG00000010682POLR3B8533.603Tursiops_truncatus
ENSXMAG00000007723polr1b9676.492ENSUAMG00000022527-9976.492Ursus_americanus
ENSXMAG00000007723polr1b9976.190ENSUMAG00000008619POLR1B9978.074Ursus_maritimus
ENSXMAG00000007723polr1b6340.268ENSVPAG00000010478POLR3B6240.268Vicugna_pacos
ENSXMAG00000007723polr1b9370.472ENSVPAG00000011111POLR1B9370.472Vicugna_pacos
ENSXMAG00000007723polr1b8533.379ENSVVUG00000023101POLR3B8933.379Vulpes_vulpes
ENSXMAG00000007723polr1b9975.838ENSVVUG00000028670POLR1B9877.023Vulpes_vulpes
ENSXMAG00000007723polr1b9973.898ENSXETG00000013749polr1b9973.898Xenopus_tropicalis
ENSXMAG00000007723polr1b7433.060ENSXETG00000005721polr3b7533.060Xenopus_tropicalis
ENSXMAG00000007723polr1b10099.295ENSXCOG00000006080polr1b10099.295Xiphophorus_couchianus

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