EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008021 (Gene tree)
Gene ID: 102234339
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 31416 bases
Position: chr16:4510411-4541826
Accession: 102234339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008046	RRM_1	PF00076.22	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008056	-	9531	XM_014475293	ENSXMAP00000008046	2168 (aa)	XP_014330779	M4A0Q2

Gene Model

Click here to download ENSXMAG00000008021's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008021	setd1a	83	95.522	ENSAPOG00000018002	setd1a	79	93.365	Acanthochromis_polyacanthus
ENSXMAG00000008021	setd1a	52	77.244	ENSAMEG00000007540	-	54	75.385	Ailuropoda_melanoleuca
ENSXMAG00000008021	setd1a	76	92.500	ENSACIG00000007144	setd1a	99	92.790	Amphilophus_citrinellus
ENSXMAG00000008021	setd1a	100	79.363	ENSAOCG00000003663	setd1a	100	79.623	Amphiprion_ocellaris
ENSXMAG00000008021	setd1a	100	76.244	ENSATEG00000022798	setd1a	100	77.051	Anabas_testudineus
ENSXMAG00000008021	setd1a	53	63.051	ENSACAG00000007606	-	72	75.676	Anolis_carolinensis
ENSXMAG00000008021	setd1a	100	79.892	ENSACLG00000024747	setd1a	100	80.606	Astatotilapia_calliptera
ENSXMAG00000008021	setd1a	100	75.598	ENSCSEG00000021605	setd1a	100	73.917	Cynoglossus_semilaevis
ENSXMAG00000008021	setd1a	89	84.221	ENSFHEG00000023258	setd1a	97	89.062	Fundulus_heteroclitus
ENSXMAG00000008021	setd1a	61	98.361	ENSGAFG00000011698	setd1a	86	99.107	Gambusia_affinis
ENSXMAG00000008021	setd1a	53	86.066	ENSGACG00000013688	setd1a	73	86.339	Gasterosteus_aculeatus
ENSXMAG00000008021	setd1a	100	80.100	ENSHBUG00000008893	setd1a	100	80.823	Haplochromis_burtoni
ENSXMAG00000008021	setd1a	76	85.795	ENSHCOG00000003119	setd1a	99	86.494	Hippocampus_comes
ENSXMAG00000008021	setd1a	100	79.324	ENSKMAG00000009484	setd1a	100	80.045	Kryptolebias_marmoratus
ENSXMAG00000008021	setd1a	100	74.217	ENSLBEG00000004399	setd1a	100	75.112	Labrus_bergylta
ENSXMAG00000008021	setd1a	72	90.661	ENSMAMG00000021851	setd1a	97	90.661	Mastacembelus_armatus
ENSXMAG00000008021	setd1a	100	79.846	ENSMZEG00005023141	setd1a	100	80.515	Maylandia_zebra
ENSXMAG00000008021	setd1a	51	82.095	ENSMAUG00000008959	-	64	69.271	Mesocricetus_auratus
ENSXMAG00000008021	setd1a	72	92.837	ENSMMOG00000016992	setd1a	97	93.623	Mola_mola
ENSXMAG00000008021	setd1a	99	69.841	ENSMALG00000007401	setd1a	98	71.247	Monopterus_albus
ENSXMAG00000008021	setd1a	51	81.757	MGP_CAROLIEiJ_G0030519	-	100	72.081	Mus_caroli
ENSXMAG00000008021	setd1a	51	81.757	MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	Mus_spretus
ENSXMAG00000008021	setd1a	74	76.481	ENSNBRG00000004760	setd1a	100	76.132	Neolamprologus_brichardi
ENSXMAG00000008021	setd1a	86	82.724	ENSONIG00000009854	setd1a	88	82.724	Oreochromis_niloticus
ENSXMAG00000008021	setd1a	100	75.531	ENSORLG00000002213	setd1a	100	76.662	Oryzias_latipes
ENSXMAG00000008021	setd1a	100	75.577	ENSORLG00020011897	setd1a	100	76.707	Oryzias_latipes_hni
ENSXMAG00000008021	setd1a	100	76.143	ENSORLG00015004826	setd1a	100	76.913	Oryzias_latipes_hsok
ENSXMAG00000008021	setd1a	100	75.920	ENSOMEG00000019732	setd1a	100	76.895	Oryzias_melastigma
ENSXMAG00000008021	setd1a	100	94.432	ENSPFOG00000013669	setd1a	100	94.432	Poecilia_formosa
ENSXMAG00000008021	setd1a	100	96.499	ENSPLAG00000009294	setd1a	100	96.499	Poecilia_latipinna
ENSXMAG00000008021	setd1a	100	96.591	ENSPMEG00000005864	setd1a	100	96.591	Poecilia_mexicana
ENSXMAG00000008021	setd1a	100	96.364	ENSPREG00000010201	setd1a	100	96.364	Poecilia_reticulata
ENSXMAG00000008021	setd1a	100	79.548	ENSPNYG00000014139	setd1a	100	80.371	Pundamilia_nyererei
ENSXMAG00000008021	setd1a	100	59.221	ENSPNAG00000019165	setd1a	100	59.136	Pygocentrus_nattereri
ENSXMAG00000008021	setd1a	100	76.319	ENSSMAG00000008846	setd1a	100	76.601	Scophthalmus_maximus
ENSXMAG00000008021	setd1a	100	79.165	ENSSDUG00000022142	setd1a	100	78.806	Seriola_dumerili
ENSXMAG00000008021	setd1a	100	79.120	ENSSLDG00000018250	setd1a	100	78.761	Seriola_lalandi_dorsalis
ENSXMAG00000008021	setd1a	100	78.912	ENSSPAG00000007822	setd1a	100	79.272	Stegastes_partitus
ENSXMAG00000008021	setd1a	83	89.096	ENSTNIG00000014930	setd1a	85	75.783	Tetraodon_nigroviridis
ENSXMAG00000008021	setd1a	95	96.332	ENSXCOG00000017585	setd1a	97	96.730	Xiphophorus_couchianus