EuRBPDB

Description

Ensembl ID: ENSXMAG00000008026 (Gene tree)
Gene ID: -
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 13814 bases
Position: chr9:14271-28084
Accession: 102221510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008043	Surp	PF01805.20	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008053	-	1125	XM_005812890	ENSXMAP00000008043	374 (aa)	XP_005812947	M4A0P9

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008026	cherp	77	88.927	ENSAPOG00000019215	cherp	97	88.927	Acanthochromis_polyacanthus
ENSXMAG00000008026	cherp	86	82.407	ENSDARG00000021812	cherp	100	82.171	Danio_rerio
ENSXMAG00000008026	cherp	78	64.062	FBgn0261872	scaf6	94	36.017	Drosophila_melanogaster
ENSXMAG00000008026	cherp	92	99.125	ENSGAFG00000004421	cherp	85	99.125	Gambusia_affinis
ENSXMAG00000008026	cherp	92	87.464	ENSORLG00020013142	cherp	82	88.050	Oryzias_latipes_hni
ENSXMAG00000008026	cherp	92	88.047	ENSOMEG00000016947	cherp	75	90.491	Oryzias_melastigma
ENSXMAG00000008026	cherp	87	54.572	ENSPMAG00000001655	-	98	55.389	Petromyzon_marinus
ENSXMAG00000008026	cherp	92	96.210	ENSPLAG00000003350	cherp	93	96.210	Poecilia_latipinna
ENSXMAG00000008026	cherp	91	76.176	ENSSFOG00015008022	cherp	85	79.321	Scleropages_formosus
ENSXMAG00000008026	cherp	92	97.721	ENSXCOG00000005936	cherp	92	97.721	Xiphophorus_couchianus