EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008030 (Gene tree)
Gene ID: 102225938
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 16770 bases
Position: chr22:1057073-1073842
Accession: 102225938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008087	KH_1	PF00013.29	8.6e-54	1	3
ENSXMAP00000008087	KH_1	PF00013.29	8.6e-54	2	3
ENSXMAP00000008087	KH_1	PF00013.29	8.6e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008097	-	3272	XM_014469372	ENSXMAP00000008087	431 (aa)	XP_014324858	M4A0U3

Gene Model

Click here to download ENSXMAG00000008030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008030	zgc:110045	72	76.358	ENSG00000183570	PCBP3	96	69.565	Homo_sapiens
ENSXMAG00000008030	zgc:110045	73	96.835	ENSAPOG00000023735	zgc:110045	97	96.835	Acanthochromis_polyacanthus
ENSXMAG00000008030	zgc:110045	71	92.166	ENSACIG00000002577	zgc:110045	99	92.166	Amphilophus_citrinellus
ENSXMAG00000008030	zgc:110045	61	93.532	ENSAOCG00000005266	zgc:110045	94	93.532	Amphiprion_ocellaris
ENSXMAG00000008030	zgc:110045	100	92.627	ENSAPEG00000000729	zgc:110045	100	92.627	Amphiprion_percula
ENSXMAG00000008030	zgc:110045	97	86.087	ENSATEG00000011191	zgc:110045	100	86.087	Anabas_testudineus
ENSXMAG00000008030	zgc:110045	100	92.857	ENSACLG00000019285	zgc:110045	100	92.857	Astatotilapia_calliptera
ENSXMAG00000008030	zgc:110045	72	76.358	ENSBTAG00000030775	PCBP3	96	68.986	Bos_taurus
ENSXMAG00000008030	zgc:110045	72	71.988	ENSCAFG00000011907	PCBP3	88	71.988	Canis_familiaris
ENSXMAG00000008030	zgc:110045	72	69.369	ENSCHIG00000015841	PCBP3	87	69.369	Capra_hircus
ENSXMAG00000008030	zgc:110045	65	68.067	ENSTSYG00000005254	PCBP3	93	68.067	Carlito_syrichta
ENSXMAG00000008030	zgc:110045	72	54.711	ENSCAPG00000006767	PCBP3	81	54.711	Cavia_aperea
ENSXMAG00000008030	zgc:110045	71	72.561	ENSCPOG00000003648	PCBP3	87	72.561	Cavia_porcellus
ENSXMAG00000008030	zgc:110045	72	76.358	ENSCCAG00000024561	PCBP3	99	65.507	Cebus_capucinus
ENSXMAG00000008030	zgc:110045	72	76.358	ENSCATG00000038419	PCBP3	88	76.358	Cercocebus_atys
ENSXMAG00000008030	zgc:110045	71	72.561	ENSCLAG00000006667	PCBP3	87	72.561	Chinchilla_lanigera
ENSXMAG00000008030	zgc:110045	72	76.358	ENSCANG00000026757	PCBP3	88	76.358	Colobus_angolensis_palliatus
ENSXMAG00000008030	zgc:110045	71	72.561	ENSCGRG00001006836	Pcbp3	87	72.561	Cricetulus_griseus_chok1gshd
ENSXMAG00000008030	zgc:110045	71	72.561	ENSCGRG00000001837	Pcbp3	87	72.561	Cricetulus_griseus_crigri
ENSXMAG00000008030	zgc:110045	100	90.092	ENSCSEG00000010020	zgc:110045	99	92.308	Cynoglossus_semilaevis
ENSXMAG00000008030	zgc:110045	71	91.866	ENSCVAG00000004726	zgc:110045	93	91.866	Cyprinodon_variegatus
ENSXMAG00000008030	zgc:110045	50	79.724	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSXMAG00000008030	zgc:110045	69	77.311	ENSDNOG00000049518	PCBP3	89	71.772	Dasypus_novemcinctus
ENSXMAG00000008030	zgc:110045	63	69.130	ENSDORG00000003640	Pcbp3	93	69.130	Dipodomys_ordii
ENSXMAG00000008030	zgc:110045	54	68.831	ENSEBUG00000009697	zgc:110045	99	67.606	Eptatretus_burgeri
ENSXMAG00000008030	zgc:110045	72	76.038	ENSEASG00005007068	PCBP3	88	76.038	Equus_asinus_asinus
ENSXMAG00000008030	zgc:110045	72	76.038	ENSECAG00000012413	PCBP3	86	76.948	Equus_caballus
ENSXMAG00000008030	zgc:110045	100	83.028	ENSELUG00000019784	zgc:110045	100	83.028	Esox_lucius
ENSXMAG00000008030	zgc:110045	72	76.677	ENSFCAG00000014812	PCBP3	88	76.677	Felis_catus
ENSXMAG00000008030	zgc:110045	71	76.948	ENSFDAG00000009117	PCBP3	86	76.948	Fukomys_damarensis
ENSXMAG00000008030	zgc:110045	71	94.527	ENSFHEG00000018838	-	92	94.527	Fundulus_heteroclitus
ENSXMAG00000008030	zgc:110045	71	90.354	ENSGMOG00000005953	zgc:110045	95	90.354	Gadus_morhua
ENSXMAG00000008030	zgc:110045	71	98.624	ENSGAFG00000017864	zgc:110045	96	98.624	Gambusia_affinis
ENSXMAG00000008030	zgc:110045	59	96.891	ENSGAFG00000017860	-	100	96.891	Gambusia_affinis
ENSXMAG00000008030	zgc:110045	73	95.223	ENSGACG00000003044	zgc:110045	97	95.223	Gasterosteus_aculeatus
ENSXMAG00000008030	zgc:110045	72	76.358	ENSGGOG00000003683	PCBP3	88	76.358	Gorilla_gorilla
ENSXMAG00000008030	zgc:110045	73	96.835	ENSHBUG00000012495	zgc:110045	97	96.835	Haplochromis_burtoni
ENSXMAG00000008030	zgc:110045	71	72.561	ENSHGLG00000018620	PCBP3	87	72.561	Heterocephalus_glaber_female
ENSXMAG00000008030	zgc:110045	71	72.561	ENSHGLG00100013590	PCBP3	87	72.561	Heterocephalus_glaber_male
ENSXMAG00000008030	zgc:110045	65	88.532	ENSHCOG00000000818	zgc:110045	99	88.532	Hippocampus_comes
ENSXMAG00000008030	zgc:110045	59	66.160	ENSIPUG00000003932	zgc:110045	97	66.160	Ictalurus_punctatus
ENSXMAG00000008030	zgc:110045	71	72.561	ENSSTOG00000007178	PCBP3	87	72.561	Ictidomys_tridecemlineatus
ENSXMAG00000008030	zgc:110045	71	72.866	ENSJJAG00000021192	Pcbp3	87	72.866	Jaculus_jaculus
ENSXMAG00000008030	zgc:110045	96	78.551	ENSKMAG00000016179	-	95	95.385	Kryptolebias_marmoratus
ENSXMAG00000008030	zgc:110045	73	87.087	ENSLBEG00000023074	zgc:110045	97	87.087	Labrus_bergylta
ENSXMAG00000008030	zgc:110045	70	73.932	ENSLAFG00000020835	PCBP3	96	73.932	Loxodonta_africana
ENSXMAG00000008030	zgc:110045	72	76.358	ENSMFAG00000034574	PCBP3	88	76.358	Macaca_fascicularis
ENSXMAG00000008030	zgc:110045	72	76.358	ENSMMUG00000003825	PCBP3	99	70.588	Macaca_mulatta
ENSXMAG00000008030	zgc:110045	72	76.358	ENSMNEG00000035551	PCBP3	95	77.273	Macaca_nemestrina
ENSXMAG00000008030	zgc:110045	72	76.358	ENSMLEG00000038785	PCBP3	97	68.634	Mandrillus_leucophaeus
ENSXMAG00000008030	zgc:110045	73	95.541	ENSMAMG00000014389	zgc:110045	99	95.541	Mastacembelus_armatus
ENSXMAG00000008030	zgc:110045	100	92.857	ENSMZEG00005011785	zgc:110045	100	92.857	Maylandia_zebra
ENSXMAG00000008030	zgc:110045	71	72.561	ENSMAUG00000007036	Pcbp3	87	72.561	Mesocricetus_auratus
ENSXMAG00000008030	zgc:110045	72	76.038	ENSMICG00000012679	PCBP3	88	76.038	Microcebus_murinus
ENSXMAG00000008030	zgc:110045	71	72.561	ENSMOCG00000016127	Pcbp3	87	72.561	Microtus_ochrogaster
ENSXMAG00000008030	zgc:110045	58	84.211	ENSMMOG00000008398	-	99	84.211	Mola_mola
ENSXMAG00000008030	zgc:110045	61	90.050	ENSMMOG00000008399	zgc:110045	95	90.050	Mola_mola
ENSXMAG00000008030	zgc:110045	71	72.783	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.362	Mus_caroli
ENSXMAG00000008030	zgc:110045	71	72.783	ENSMUSG00000001120	Pcbp3	99	73.362	Mus_musculus
ENSXMAG00000008030	zgc:110045	71	72.783	MGP_PahariEiJ_G0030889	Pcbp3	99	73.362	Mus_pahari
ENSXMAG00000008030	zgc:110045	71	72.783	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.362	Mus_spretus
ENSXMAG00000008030	zgc:110045	72	71.772	ENSMLUG00000003074	PCBP3	88	71.772	Myotis_lucifugus
ENSXMAG00000008030	zgc:110045	71	72.561	ENSNGAG00000005416	Pcbp3	87	72.561	Nannospalax_galili
ENSXMAG00000008030	zgc:110045	100	92.857	ENSNBRG00000017646	zgc:110045	100	92.857	Neolamprologus_brichardi
ENSXMAG00000008030	zgc:110045	72	76.358	ENSNLEG00000002639	PCBP3	88	76.358	Nomascus_leucogenys
ENSXMAG00000008030	zgc:110045	71	66.667	ENSMEUG00000012960	PCBP3	96	66.667	Notamacropus_eugenii
ENSXMAG00000008030	zgc:110045	71	70.122	ENSODEG00000012873	PCBP3	87	70.122	Octodon_degus
ENSXMAG00000008030	zgc:110045	100	89.327	ENSONIG00000010370	zgc:110045	100	89.559	Oreochromis_niloticus
ENSXMAG00000008030	zgc:110045	68	72.908	ENSOANG00000006265	PCBP3	88	72.908	Ornithorhynchus_anatinus
ENSXMAG00000008030	zgc:110045	100	90.092	ENSORLG00000014385	-	100	90.092	Oryzias_latipes
ENSXMAG00000008030	zgc:110045	100	88.940	ENSORLG00020003139	zgc:110045	100	89.631	Oryzias_latipes_hni
ENSXMAG00000008030	zgc:110045	100	91.705	ENSOMEG00000015459	-	100	91.705	Oryzias_melastigma
ENSXMAG00000008030	zgc:110045	72	69.486	ENSOARG00000012704	PCBP3	88	69.486	Ovis_aries
ENSXMAG00000008030	zgc:110045	72	76.358	ENSPPAG00000021940	PCBP3	88	76.358	Pan_paniscus
ENSXMAG00000008030	zgc:110045	72	76.677	ENSPPRG00000003933	PCBP3	88	76.677	Panthera_pardus
ENSXMAG00000008030	zgc:110045	72	62.658	ENSPTIG00000012038	PCBP3	87	63.259	Panthera_tigris_altaica
ENSXMAG00000008030	zgc:110045	72	55.911	ENSPTRG00000014010	PCBP3	97	50.568	Pan_troglodytes
ENSXMAG00000008030	zgc:110045	72	76.358	ENSPANG00000023631	PCBP3	88	76.358	Papio_anubis
ENSXMAG00000008030	zgc:110045	50	58.065	ENSPMGG00000022531	-	96	58.065	Periophthalmus_magnuspinnatus
ENSXMAG00000008030	zgc:110045	100	73.576	ENSPMGG00000021588	-	99	74.658	Periophthalmus_magnuspinnatus
ENSXMAG00000008030	zgc:110045	71	72.561	ENSPEMG00000000587	Pcbp3	87	72.561	Peromyscus_maniculatus_bairdii
ENSXMAG00000008030	zgc:110045	77	96.386	ENSPFOG00000002348	zgc:110045	100	96.386	Poecilia_formosa
ENSXMAG00000008030	zgc:110045	65	94.495	ENSPLAG00000017488	zgc:110045	96	94.495	Poecilia_latipinna
ENSXMAG00000008030	zgc:110045	71	98.624	ENSPMEG00000012762	zgc:110045	96	98.624	Poecilia_mexicana
ENSXMAG00000008030	zgc:110045	100	98.376	ENSPREG00000001797	zgc:110045	100	98.376	Poecilia_reticulata
ENSXMAG00000008030	zgc:110045	67	69.349	ENSPPYG00000011525	-	94	69.349	Pongo_abelii
ENSXMAG00000008030	zgc:110045	70	58.065	ENSPCAG00000001454	PCBP3	98	58.065	Procavia_capensis
ENSXMAG00000008030	zgc:110045	72	76.038	ENSPCOG00000013797	PCBP3	88	76.038	Propithecus_coquereli
ENSXMAG00000008030	zgc:110045	57	78.788	ENSPVAG00000000832	PCBP3	73	76.471	Pteropus_vampyrus
ENSXMAG00000008030	zgc:110045	59	85.714	ENSPNYG00000004656	-	98	85.714	Pundamilia_nyererei
ENSXMAG00000008030	zgc:110045	71	92.627	ENSPNYG00000004637	zgc:110045	99	92.627	Pundamilia_nyererei
ENSXMAG00000008030	zgc:110045	67	80.184	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSXMAG00000008030	zgc:110045	72	76.358	ENSRROG00000034567	PCBP3	88	76.358	Rhinopithecus_roxellana
ENSXMAG00000008030	zgc:110045	72	76.358	ENSSBOG00000005789	PCBP3	88	76.358	Saimiri_boliviensis_boliviensis
ENSXMAG00000008030	zgc:110045	100	90.972	ENSSMAG00000013541	zgc:110045	100	90.972	Scophthalmus_maximus
ENSXMAG00000008030	zgc:110045	97	92.174	ENSSDUG00000019371	zgc:110045	100	92.174	Seriola_dumerili
ENSXMAG00000008030	zgc:110045	100	93.318	ENSSLDG00000021064	zgc:110045	100	93.318	Seriola_lalandi_dorsalis
ENSXMAG00000008030	zgc:110045	73	97.152	ENSSPAG00000000563	zgc:110045	97	97.152	Stegastes_partitus
ENSXMAG00000008030	zgc:110045	72	76.358	ENSSSCG00000023041	PCBP3	88	76.358	Sus_scrofa
ENSXMAG00000008030	zgc:110045	71	92.462	ENSTRUG00000017789	zgc:110045	98	92.462	Takifugu_rubripes
ENSXMAG00000008030	zgc:110045	57	87.895	ENSTNIG00000003546	zgc:110045	94	87.895	Tetraodon_nigroviridis
ENSXMAG00000008030	zgc:110045	54	59.483	ENSTBEG00000011882	-	71	59.483	Tupaia_belangeri
ENSXMAG00000008030	zgc:110045	70	75.362	ENSUAMG00000006491	PCBP3	96	75.362	Ursus_americanus
ENSXMAG00000008030	zgc:110045	71	64.072	ENSUMAG00000025403	PCBP3	87	64.072	Ursus_maritimus
ENSXMAG00000008030	zgc:110045	72	67.077	ENSVVUG00000023862	PCBP3	95	64.048	Vulpes_vulpes
ENSXMAG00000008030	zgc:110045	79	95.322	ENSXCOG00000005968	zgc:110045	96	95.322	Xiphophorus_couchianus