EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008069 (Gene tree)
Gene ID: 102236671
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6181 bases
Position: chr14:3791554-3797734
Accession: 102236671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008086	zf-CCHC	PF00098.23	6.4e-08	1	1
ENSXMAP00000008086	RRM_5	PF13893.6	2.7e-08	1	1
ENSXMAP00000008086	RRM_1	PF00076.22	7.7e-32	1	2
ENSXMAP00000008086	RRM_1	PF00076.22	7.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008096	-	3528	XM_005807913	ENSXMAP00000008086	419 (aa)	XP_005807970	M4A0U2

Gene Model

Click here to download ENSXMAG00000008069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008069	rbm4.1	100	78.251	ENSAPOG00000012353	rbm4.1	100	78.960	Acanthochromis_polyacanthus
ENSXMAG00000008069	rbm4.1	100	77.305	ENSACIG00000016482	rbm4.1	100	77.778	Amphilophus_citrinellus
ENSXMAG00000008069	rbm4.1	100	78.960	ENSAOCG00000010915	rbm4.1	100	79.669	Amphiprion_ocellaris
ENSXMAG00000008069	rbm4.1	100	78.960	ENSAPEG00000009494	rbm4.1	100	79.669	Amphiprion_percula
ENSXMAG00000008069	rbm4.1	100	78.487	ENSATEG00000001904	rbm4.1	100	79.196	Anabas_testudineus
ENSXMAG00000008069	rbm4.1	96	48.166	ENSACLG00000007740	-	94	49.377	Astatotilapia_calliptera
ENSXMAG00000008069	rbm4.1	100	76.596	ENSACLG00000007722	rbm4.1	100	77.069	Astatotilapia_calliptera
ENSXMAG00000008069	rbm4.1	100	61.229	ENSAMXG00000036611	rbm4.1	100	61.939	Astyanax_mexicanus
ENSXMAG00000008069	rbm4.1	94	49.751	ENSCSEG00000014359	-	94	49.510	Cynoglossus_semilaevis
ENSXMAG00000008069	rbm4.1	100	69.431	ENSCSEG00000014365	rbm4.1	100	69.431	Cynoglossus_semilaevis
ENSXMAG00000008069	rbm4.1	100	85.442	ENSCVAG00000019349	rbm4.1	100	86.158	Cyprinodon_variegatus
ENSXMAG00000008069	rbm4.1	75	71.111	ENSDARG00000055080	rbm4.2	100	49.764	Danio_rerio
ENSXMAG00000008069	rbm4.1	100	64.706	ENSDARG00000036386	rbm4.1	100	65.647	Danio_rerio
ENSXMAG00000008069	rbm4.1	100	61.647	ENSELUG00000013205	rbm4.1	100	62.441	Esox_lucius
ENSXMAG00000008069	rbm4.1	100	87.112	ENSFHEG00000022926	rbm4.1	100	87.112	Fundulus_heteroclitus
ENSXMAG00000008069	rbm4.1	100	63.059	ENSGMOG00000007464	rbm4.1	100	65.566	Gadus_morhua
ENSXMAG00000008069	rbm4.1	92	48.750	ENSGMOG00000007455	-	92	51.786	Gadus_morhua
ENSXMAG00000008069	rbm4.1	100	99.523	ENSGAFG00000019302	rbm4.1	100	99.523	Gambusia_affinis
ENSXMAG00000008069	rbm4.1	99	87.500	ENSGACG00000000822	rbm4.1	100	87.500	Gasterosteus_aculeatus
ENSXMAG00000008069	rbm4.1	94	50.743	ENSGACG00000000821	-	94	50.743	Gasterosteus_aculeatus
ENSXMAG00000008069	rbm4.1	100	76.596	ENSHBUG00000011610	rbm4.1	100	77.069	Haplochromis_burtoni
ENSXMAG00000008069	rbm4.1	92	65.729	ENSHCOG00000011403	rbm4.1	95	66.582	Hippocampus_comes
ENSXMAG00000008069	rbm4.1	100	49.881	ENSIPUG00000022937	rbm4.2	100	50.355	Ictalurus_punctatus
ENSXMAG00000008069	rbm4.1	100	60.682	ENSIPUG00000022931	rbm4.1	100	61.905	Ictalurus_punctatus
ENSXMAG00000008069	rbm4.1	99	43.807	ENSKMAG00000006528	-	99	45.035	Kryptolebias_marmoratus
ENSXMAG00000008069	rbm4.1	100	76.540	ENSKMAG00000006556	rbm4.1	100	77.251	Kryptolebias_marmoratus
ENSXMAG00000008069	rbm4.1	100	75.355	ENSLBEG00000019782	rbm4.1	100	75.355	Labrus_bergylta
ENSXMAG00000008069	rbm4.1	94	50.000	ENSLBEG00000019756	-	90	62.179	Labrus_bergylta
ENSXMAG00000008069	rbm4.1	99	52.123	ENSMAMG00000001760	-	100	52.123	Mastacembelus_armatus
ENSXMAG00000008069	rbm4.1	100	78.251	ENSMAMG00000001765	rbm4.1	100	78.960	Mastacembelus_armatus
ENSXMAG00000008069	rbm4.1	100	76.596	ENSMZEG00005009205	rbm4.1	100	77.069	Maylandia_zebra
ENSXMAG00000008069	rbm4.1	100	77.176	ENSMMOG00000020479	rbm4.1	100	77.176	Mola_mola
ENSXMAG00000008069	rbm4.1	94	52.750	ENSMALG00000020557	-	94	53.000	Monopterus_albus
ENSXMAG00000008069	rbm4.1	100	77.725	ENSMALG00000020544	rbm4.1	100	78.436	Monopterus_albus
ENSXMAG00000008069	rbm4.1	100	76.832	ENSNBRG00000017755	rbm4.1	100	77.305	Neolamprologus_brichardi
ENSXMAG00000008069	rbm4.1	100	76.832	ENSONIG00000015730	rbm4.1	100	77.305	Oreochromis_niloticus
ENSXMAG00000008069	rbm4.1	100	75.476	ENSORLG00000012496	rbm4.1	100	75.476	Oryzias_latipes
ENSXMAG00000008069	rbm4.1	100	75.476	ENSORLG00020012454	rbm4.1	100	75.476	Oryzias_latipes_hni
ENSXMAG00000008069	rbm4.1	100	75.714	ENSORLG00015013678	rbm4.1	100	75.714	Oryzias_latipes_hsok
ENSXMAG00000008069	rbm4.1	100	75.952	ENSOMEG00000001001	rbm4.1	100	75.952	Oryzias_melastigma
ENSXMAG00000008069	rbm4.1	100	59.302	ENSPKIG00000020805	rbm4.1	85	80.435	Paramormyrops_kingsleyae
ENSXMAG00000008069	rbm4.1	99	46.875	ENSPFOG00000012685	-	99	48.077	Poecilia_formosa
ENSXMAG00000008069	rbm4.1	100	99.761	ENSPFOG00000012675	rbm4.1	100	99.761	Poecilia_formosa
ENSXMAG00000008069	rbm4.1	100	99.761	ENSPLAG00000018572	rbm4.1	100	99.761	Poecilia_latipinna
ENSXMAG00000008069	rbm4.1	100	99.761	ENSPMEG00000006290	rbm4.1	100	99.761	Poecilia_mexicana
ENSXMAG00000008069	rbm4.1	99	45.192	ENSPREG00000003764	-	99	44.262	Poecilia_reticulata
ENSXMAG00000008069	rbm4.1	100	99.761	ENSPREG00000003724	rbm4.1	100	99.761	Poecilia_reticulata
ENSXMAG00000008069	rbm4.1	100	76.596	ENSPNYG00000004662	rbm4.1	100	77.069	Pundamilia_nyererei
ENSXMAG00000008069	rbm4.1	100	50.236	ENSPNAG00000013057	rbm4.2	100	49.645	Pygocentrus_nattereri
ENSXMAG00000008069	rbm4.1	100	63.466	ENSPNAG00000002539	rbm4.1	100	65.268	Pygocentrus_nattereri
ENSXMAG00000008069	rbm4.1	100	61.111	ENSSFOG00015021996	sf1	100	62.791	Scleropages_formosus
ENSXMAG00000008069	rbm4.1	100	74.408	ENSSMAG00000007571	rbm4.1	100	74.171	Scophthalmus_maximus
ENSXMAG00000008069	rbm4.1	100	77.541	ENSSDUG00000003925	rbm4.1	100	78.960	Seriola_dumerili
ENSXMAG00000008069	rbm4.1	94	53.401	ENSSDUG00000003936	-	94	54.386	Seriola_dumerili
ENSXMAG00000008069	rbm4.1	100	77.541	ENSSLDG00000013147	rbm4.1	100	78.960	Seriola_lalandi_dorsalis
ENSXMAG00000008069	rbm4.1	94	52.010	ENSSLDG00000013157	-	94	52.393	Seriola_lalandi_dorsalis
ENSXMAG00000008069	rbm4.1	100	78.302	ENSSPAG00000019053	rbm4.1	100	79.953	Stegastes_partitus
ENSXMAG00000008069	rbm4.1	99	48.694	ENSSPAG00000019046	-	99	47.743	Stegastes_partitus
ENSXMAG00000008069	rbm4.1	99	47.381	ENSTRUG00000013328	-	99	46.905	Takifugu_rubripes
ENSXMAG00000008069	rbm4.1	100	71.564	ENSTRUG00000013334	rbm4.1	100	71.801	Takifugu_rubripes
ENSXMAG00000008069	rbm4.1	81	83.256	ENSTNIG00000004821	rbm4.1	100	55.370	Tetraodon_nigroviridis
ENSXMAG00000008069	rbm4.1	96	48.522	ENSTNIG00000000316	-	96	48.780	Tetraodon_nigroviridis
ENSXMAG00000008069	rbm4.1	100	99.761	ENSXCOG00000003731	rbm4.1	100	99.761	Xiphophorus_couchianus
ENSXMAG00000008069	rbm4.1	99	47.837	ENSXMAG00000008059	-	95	73.006	Xiphophorus_maculatus