EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008071 (Gene tree)
Gene ID: 102216427
Gene Symbol: gatb
Alias: pet112|pet112l|si:ch211-150a22.1|zgc:103736
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 14986 bases
Position: chr5:29075500-29090485
Accession: 102216427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024431	GatB_Yqey	PF02637.18	1.5e-40	1	1
ENSXMAP00000035003	GatB_Yqey	PF02637.18	1.9e-40	1	1
ENSXMAP00000008098	GatB_Yqey	PF02637.18	2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008108	-	2331	XM_005809402	ENSXMAP00000008098	546 (aa)	XP_005809459	M4A0V4
ENSXMAT00000026682	-	2094	-	ENSXMAP00000024431	467 (aa)	-	-
ENSXMAT00000040429	-	1614	-	ENSXMAP00000035003	537 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000008071's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG
xma01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008071	gatb	90	78.344	ENSG00000059691	GATB	96	61.296	Homo_sapiens
ENSXMAG00000008071	gatb	100	82.927	ENSAPOG00000022676	gatb	100	82.514	Acanthochromis_polyacanthus
ENSXMAG00000008071	gatb	90	78.344	ENSAMEG00000018434	GATB	82	78.344	Ailuropoda_melanoleuca
ENSXMAG00000008071	gatb	77	90.323	ENSACIG00000015827	gatb	100	83.066	Amphilophus_citrinellus
ENSXMAG00000008071	gatb	90	89.744	ENSAOCG00000009635	gatb	96	84.800	Amphiprion_ocellaris
ENSXMAG00000008071	gatb	90	89.103	ENSAPEG00000023666	gatb	94	81.263	Amphiprion_percula
ENSXMAG00000008071	gatb	100	80.474	ENSATEG00000011821	gatb	99	84.141	Anabas_testudineus
ENSXMAG00000008071	gatb	89	82.667	ENSAPLG00000003933	GATB	99	68.623	Anas_platyrhynchos
ENSXMAG00000008071	gatb	90	77.848	ENSACAG00000002772	GATB	91	66.733	Anolis_carolinensis
ENSXMAG00000008071	gatb	92	76.687	ENSANAG00000020953	GATB	96	60.741	Aotus_nancymaae
ENSXMAG00000008071	gatb	85	80.851	ENSACLG00000026091	gatb	95	80.851	Astatotilapia_calliptera
ENSXMAG00000008071	gatb	89	80.263	ENSAMXG00000021662	gatb	89	70.565	Astyanax_mexicanus
ENSXMAG00000008071	gatb	92	76.074	ENSBTAG00000013914	GATB	91	65.680	Bos_taurus
ENSXMAG00000008071	gatb	92	76.074	ENSCJAG00000002147	GATB	96	60.926	Callithrix_jacchus
ENSXMAG00000008071	gatb	89	82.550	ENSCAFG00000008088	GATB	74	82.550	Canis_familiaris
ENSXMAG00000008071	gatb	89	82.550	ENSCAFG00020026686	GATB	75	82.550	Canis_lupus_dingo
ENSXMAG00000008071	gatb	92	75.460	ENSCHIG00000020111	GATB	91	65.286	Capra_hircus
ENSXMAG00000008071	gatb	90	78.344	ENSTSYG00000009976	GATB	90	68.064	Carlito_syrichta
ENSXMAG00000008071	gatb	88	59.459	ENSCAPG00000010977	GATB	90	59.459	Cavia_aperea
ENSXMAG00000008071	gatb	94	64.133	ENSCPOG00000005023	GATB	92	64.133	Cavia_porcellus
ENSXMAG00000008071	gatb	73	77.301	ENSCCAG00000021445	GATB	85	70.142	Cebus_capucinus
ENSXMAG00000008071	gatb	92	78.528	ENSCATG00000034281	GATB	96	60.370	Cercocebus_atys
ENSXMAG00000008071	gatb	92	75.460	ENSCLAG00000005772	GATB	89	69.834	Chinchilla_lanigera
ENSXMAG00000008071	gatb	92	78.528	ENSCSAG00000003318	GATB	96	60.741	Chlorocebus_sabaeus
ENSXMAG00000008071	gatb	93	65.810	ENSCHOG00000008476	GATB	90	65.810	Choloepus_hoffmanni
ENSXMAG00000008071	gatb	89	82.667	ENSCPBG00000025824	GATB	89	69.028	Chrysemys_picta_bellii
ENSXMAG00000008071	gatb	92	78.528	ENSCANG00000029227	GATB	96	61.111	Colobus_angolensis_palliatus
ENSXMAG00000008071	gatb	92	76.687	ENSCGRG00001024051	GATB	89	70.784	Cricetulus_griseus_chok1gshd
ENSXMAG00000008071	gatb	92	76.687	ENSCGRG00000012974	GATB	89	70.784	Cricetulus_griseus_crigri
ENSXMAG00000008071	gatb	100	77.184	ENSCSEG00000004009	gatb	100	78.261	Cynoglossus_semilaevis
ENSXMAG00000008071	gatb	90	93.506	ENSCVAG00000017180	gatb	99	88.755	Cyprinodon_variegatus
ENSXMAG00000008071	gatb	89	80.921	ENSDARG00000037309	gatb	89	72.211	Danio_rerio
ENSXMAG00000008071	gatb	91	79.012	ENSDNOG00000012683	GATB	91	66.732	Dasypus_novemcinctus
ENSXMAG00000008071	gatb	91	76.687	ENSDORG00000010241	Gatb	95	60.870	Dipodomys_ordii
ENSXMAG00000008071	gatb	88	62.416	FBgn0039153	GatB	94	46.748	Drosophila_melanogaster
ENSXMAG00000008071	gatb	91	50.000	ENSETEG00000002356	GATB	92	47.266	Echinops_telfairi
ENSXMAG00000008071	gatb	53	48.000	ENSEBUG00000005611	-	95	48.000	Eptatretus_burgeri
ENSXMAG00000008071	gatb	95	71.038	ENSEASG00005015868	GATB	94	65.524	Equus_asinus_asinus
ENSXMAG00000008071	gatb	95	67.760	ENSECAG00000003539	GATB	94	64.381	Equus_caballus
ENSXMAG00000008071	gatb	77	64.478	ENSEEUG00000002311	GATB	75	64.955	Erinaceus_europaeus
ENSXMAG00000008071	gatb	100	72.202	ENSELUG00000013584	gatb	98	75.794	Esox_lucius
ENSXMAG00000008071	gatb	90	77.707	ENSFCAG00000003207	GATB	96	61.351	Felis_catus
ENSXMAG00000008071	gatb	79	77.885	ENSFALG00000002209	GATB	99	64.955	Ficedula_albicollis
ENSXMAG00000008071	gatb	95	61.228	ENSFDAG00000006426	GATB	87	70.316	Fukomys_damarensis
ENSXMAG00000008071	gatb	100	90.196	ENSFHEG00000008643	GATB	100	86.496	Fundulus_heteroclitus
ENSXMAG00000008071	gatb	88	84.459	ENSGMOG00000001575	gatb	100	78.455	Gadus_morhua
ENSXMAG00000008071	gatb	95	72.778	ENSGALG00000010097	GATB	96	65.649	Gallus_gallus
ENSXMAG00000008071	gatb	100	97.436	ENSGAFG00000014422	gatb	100	97.436	Gambusia_affinis
ENSXMAG00000008071	gatb	88	83.784	ENSGACG00000017143	gatb	99	80.855	Gasterosteus_aculeatus
ENSXMAG00000008071	gatb	89	82.667	ENSGAGG00000007826	GATB	95	65.019	Gopherus_agassizii
ENSXMAG00000008071	gatb	90	78.344	ENSGGOG00000011099	GATB	96	61.111	Gorilla_gorilla
ENSXMAG00000008071	gatb	98	80.334	ENSHBUG00000009656	gatb	98	80.334	Haplochromis_burtoni
ENSXMAG00000008071	gatb	92	76.829	ENSHGLG00000001316	GATB	89	70.047	Heterocephalus_glaber_female
ENSXMAG00000008071	gatb	92	76.829	ENSHGLG00100004289	GATB	89	70.379	Heterocephalus_glaber_male
ENSXMAG00000008071	gatb	100	72.212	ENSHCOG00000006270	gatb	99	72.212	Hippocampus_comes
ENSXMAG00000008071	gatb	100	68.599	ENSIPUG00000013560	gatb	100	68.421	Ictalurus_punctatus
ENSXMAG00000008071	gatb	90	77.707	ENSSTOG00000005689	GATB	94	63.027	Ictidomys_tridecemlineatus
ENSXMAG00000008071	gatb	93	71.930	ENSJJAG00000016979	Gatb	94	64.877	Jaculus_jaculus
ENSXMAG00000008071	gatb	100	82.117	ENSKMAG00000004727	gatb	100	82.117	Kryptolebias_marmoratus
ENSXMAG00000008071	gatb	100	79.091	ENSLBEG00000019511	gatb	100	79.091	Labrus_bergylta
ENSXMAG00000008071	gatb	81	89.773	ENSLACG00000004352	GATB	76	89.773	Latimeria_chalumnae
ENSXMAG00000008071	gatb	100	67.299	ENSLOCG00000008564	gatb	100	59.498	Lepisosteus_oculatus
ENSXMAG00000008071	gatb	92	78.528	ENSLAFG00000022607	GATB	91	66.667	Loxodonta_africana
ENSXMAG00000008071	gatb	91	79.012	ENSMMUG00000011048	GATB	96	60.556	Macaca_mulatta
ENSXMAG00000008071	gatb	92	78.528	ENSMNEG00000040147	GATB	96	60.556	Macaca_nemestrina
ENSXMAG00000008071	gatb	92	78.528	ENSMLEG00000042135	GATB	96	60.926	Mandrillus_leucophaeus
ENSXMAG00000008071	gatb	100	78.909	ENSMAMG00000013256	gatb	100	78.909	Mastacembelus_armatus
ENSXMAG00000008071	gatb	100	80.474	ENSMZEG00005008495	gatb	100	80.474	Maylandia_zebra
ENSXMAG00000008071	gatb	89	82.550	ENSMGAG00000004276	GATB	97	68.357	Meleagris_gallopavo
ENSXMAG00000008071	gatb	92	77.301	ENSMAUG00000019099	Gatb	89	70.546	Mesocricetus_auratus
ENSXMAG00000008071	gatb	90	77.070	ENSMICG00000004311	GATB	94	61.437	Microcebus_murinus
ENSXMAG00000008071	gatb	92	75.460	ENSMOCG00000017566	Gatb	89	69.359	Microtus_ochrogaster
ENSXMAG00000008071	gatb	92	67.871	ENSMMOG00000005376	gatb	88	67.871	Mola_mola
ENSXMAG00000008071	gatb	91	77.439	ENSMODG00000001031	GATB	92	66.996	Monodelphis_domestica
ENSXMAG00000008071	gatb	98	80.407	ENSMALG00000003418	gatb	99	80.407	Monopterus_albus
ENSXMAG00000008071	gatb	92	75.460	MGP_CAROLIEiJ_G0025120	Gatb	93	66.364	Mus_caroli
ENSXMAG00000008071	gatb	92	76.074	ENSMUSG00000028085	Gatb	95	64.143	Mus_musculus
ENSXMAG00000008071	gatb	92	76.074	MGP_PahariEiJ_G0026563	Gatb	96	63.816	Mus_pahari
ENSXMAG00000008071	gatb	92	76.074	MGP_SPRETEiJ_G0026062	Gatb	96	60.935	Mus_spretus
ENSXMAG00000008071	gatb	90	78.344	ENSMPUG00000007394	GATB	82	78.344	Mustela_putorius_furo
ENSXMAG00000008071	gatb	99	64.168	ENSMLUG00000008194	GATB	98	64.168	Myotis_lucifugus
ENSXMAG00000008071	gatb	90	79.618	ENSNGAG00000002152	Gatb	87	72.019	Nannospalax_galili
ENSXMAG00000008071	gatb	77	88.172	ENSNBRG00000005947	gatb	100	82.916	Neolamprologus_brichardi
ENSXMAG00000008071	gatb	92	77.914	ENSNLEG00000005836	GATB	96	61.296	Nomascus_leucogenys
ENSXMAG00000008071	gatb	89	79.085	ENSMEUG00000001479	GATB	99	66.465	Notamacropus_eugenii
ENSXMAG00000008071	gatb	95	69.780	ENSOPRG00000011496	GATB	94	65.019	Ochotona_princeps
ENSXMAG00000008071	gatb	92	75.460	ENSODEG00000005429	GATB	89	69.121	Octodon_degus
ENSXMAG00000008071	gatb	100	80.474	ENSONIG00000010059	gatb	100	80.474	Oreochromis_niloticus
ENSXMAG00000008071	gatb	76	78.495	ENSOANG00000005282	GATB	99	64.598	Ornithorhynchus_anatinus
ENSXMAG00000008071	gatb	92	74.847	ENSOCUG00000016875	GATB	91	66.272	Oryctolagus_cuniculus
ENSXMAG00000008071	gatb	89	86.452	ENSORLG00000007740	gatb	100	80.606	Oryzias_latipes
ENSXMAG00000008071	gatb	99	79.562	ENSORLG00020016385	gatb	99	79.562	Oryzias_latipes_hni
ENSXMAG00000008071	gatb	99	79.927	ENSOMEG00000003089	gatb	99	79.927	Oryzias_melastigma
ENSXMAG00000008071	gatb	95	71.271	ENSOGAG00000014181	GATB	94	64.000	Otolemur_garnettii
ENSXMAG00000008071	gatb	92	75.460	ENSOARG00000004355	GATB	96	60.110	Ovis_aries
ENSXMAG00000008071	gatb	90	78.344	ENSPPAG00000041690	GATB	96	61.296	Pan_paniscus
ENSXMAG00000008071	gatb	90	77.707	ENSPPRG00000004993	GATB	96	61.194	Panthera_pardus
ENSXMAG00000008071	gatb	90	77.707	ENSPTIG00000021433	GATB	96	61.351	Panthera_tigris_altaica
ENSXMAG00000008071	gatb	99	60.829	ENSPTRG00000016513	GATB	96	60.829	Pan_troglodytes
ENSXMAG00000008071	gatb	92	78.528	ENSPANG00000024036	GATB	76	78.528	Papio_anubis
ENSXMAG00000008071	gatb	90	79.739	ENSPKIG00000017076	gatb	96	72.233	Paramormyrops_kingsleyae
ENSXMAG00000008071	gatb	89	82.667	ENSPSIG00000017832	GATB	78	82.667	Pelodiscus_sinensis
ENSXMAG00000008071	gatb	91	69.715	ENSPMGG00000016497	gatb	91	67.976	Periophthalmus_magnuspinnatus
ENSXMAG00000008071	gatb	91	77.778	ENSPEMG00000011096	Gatb	89	70.476	Peromyscus_maniculatus_bairdii
ENSXMAG00000008071	gatb	91	77.439	ENSPCIG00000015213	GATB	92	66.996	Phascolarctos_cinereus
ENSXMAG00000008071	gatb	100	95.050	ENSPFOG00000009933	gatb	100	94.900	Poecilia_formosa
ENSXMAG00000008071	gatb	100	94.872	ENSPLAG00000015569	gatb	100	94.872	Poecilia_latipinna
ENSXMAG00000008071	gatb	100	95.238	ENSPMEG00000006100	gatb	100	95.238	Poecilia_mexicana
ENSXMAG00000008071	gatb	100	93.956	ENSPREG00000000128	gatb	100	93.956	Poecilia_reticulata
ENSXMAG00000008071	gatb	92	77.914	ENSPPYG00000015121	GATB	96	61.667	Pongo_abelii
ENSXMAG00000008071	gatb	83	81.699	ENSPCAG00000005950	GATB	69	81.699	Procavia_capensis
ENSXMAG00000008071	gatb	90	77.070	ENSPCOG00000021777	GATB	96	61.437	Propithecus_coquereli
ENSXMAG00000008071	gatb	90	77.707	ENSPVAG00000006891	GATB	89	65.996	Pteropus_vampyrus
ENSXMAG00000008071	gatb	100	80.474	ENSPNYG00000013884	gatb	100	80.474	Pundamilia_nyererei
ENSXMAG00000008071	gatb	100	69.259	ENSPNAG00000020150	gatb	100	69.259	Pygocentrus_nattereri
ENSXMAG00000008071	gatb	92	76.074	ENSRNOG00000037655	Gatb	97	59.853	Rattus_norvegicus
ENSXMAG00000008071	gatb	92	78.528	ENSRBIG00000006453	GATB	96	61.111	Rhinopithecus_bieti
ENSXMAG00000008071	gatb	92	78.528	ENSRROG00000041575	GATB	96	61.111	Rhinopithecus_roxellana
ENSXMAG00000008071	gatb	87	30.233	YBL080C	-	91	30.233	Saccharomyces_cerevisiae
ENSXMAG00000008071	gatb	92	77.301	ENSSBOG00000022495	GATB	96	60.741	Saimiri_boliviensis_boliviensis
ENSXMAG00000008071	gatb	95	69.945	ENSSHAG00000011763	GATB	96	64.190	Sarcophilus_harrisii
ENSXMAG00000008071	gatb	95	73.596	ENSSFOG00015015565	gatb	94	71.839	Scleropages_formosus
ENSXMAG00000008071	gatb	100	80.364	ENSSMAG00000003609	gatb	76	80.364	Scophthalmus_maximus
ENSXMAG00000008071	gatb	99	81.421	ENSSDUG00000019847	gatb	99	81.421	Seriola_dumerili
ENSXMAG00000008071	gatb	90	88.462	ENSSLDG00000010253	gatb	96	83.968	Seriola_lalandi_dorsalis
ENSXMAG00000008071	gatb	62	76.074	ENSSARG00000003212	GATB	66	63.158	Sorex_araneus
ENSXMAG00000008071	gatb	88	81.333	ENSSPUG00000014453	GATB	95	66.667	Sphenodon_punctatus
ENSXMAG00000008071	gatb	90	89.103	ENSSPAG00000014465	gatb	99	84.400	Stegastes_partitus
ENSXMAG00000008071	gatb	98	61.567	ENSSSCG00000009015	GATB	99	64.302	Sus_scrofa
ENSXMAG00000008071	gatb	89	82.667	ENSTGUG00000004986	GATB	99	68.421	Taeniopygia_guttata
ENSXMAG00000008071	gatb	89	83.333	ENSTRUG00000015238	gatb	92	73.948	Takifugu_rubripes
ENSXMAG00000008071	gatb	75	77.941	ENSTNIG00000003378	gatb	99	77.941	Tetraodon_nigroviridis
ENSXMAG00000008071	gatb	79	49.884	ENSTBEG00000009804	GATB	88	49.884	Tupaia_belangeri
ENSXMAG00000008071	gatb	92	73.006	ENSTTRG00000010679	GATB	91	65.089	Tursiops_truncatus
ENSXMAG00000008071	gatb	90	78.344	ENSUAMG00000021441	GATB	82	78.344	Ursus_americanus
ENSXMAG00000008071	gatb	90	78.344	ENSUMAG00000016157	GATB	83	80.392	Ursus_maritimus
ENSXMAG00000008071	gatb	71	76.000	ENSVPAG00000010844	GATB	69	76.000	Vicugna_pacos
ENSXMAG00000008071	gatb	90	80.392	ENSVVUG00000025083	GATB	94	62.452	Vulpes_vulpes
ENSXMAG00000008071	gatb	88	77.931	ENSXETG00000034167	GATB	98	68.357	Xenopus_tropicalis