EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008076 (Gene tree)
Gene ID: 102223847
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3219 bases
Position: chr1:16095269-16098487
Accession: 102223847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008095	RRM_1	PF00076.22	3.3e-36	1	2
ENSXMAP00000008095	RRM_1	PF00076.22	3.3e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008105	-	1996	XM_023336245	ENSXMAP00000008095	341 (aa)	XP_023192013	M4A0V1

Gene Model

Click here to download ENSXMAG00000008076's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008076	-	90	84.967	ENSAPOG00000019369	-	90	84.641	Acanthochromis_polyacanthus
ENSXMAG00000008076	-	52	55.932	ENSACIG00000021815	-	95	54.872	Amphilophus_citrinellus
ENSXMAG00000008076	-	65	96.861	ENSAOCG00000005289	-	68	96.444	Amphiprion_ocellaris
ENSXMAG00000008076	-	65	96.861	ENSAPEG00000004179	-	68	96.444	Amphiprion_percula
ENSXMAG00000008076	-	90	87.582	ENSATEG00000022918	hnrnpa1a	92	95.939	Anabas_testudineus
ENSXMAG00000008076	-	51	59.119	ENSATEG00000003423	-	75	59.119	Anabas_testudineus
ENSXMAG00000008076	-	53	56.044	ENSACAG00000017109	-	67	44.944	Anolis_carolinensis
ENSXMAG00000008076	-	65	95.575	ENSACLG00000006940	-	68	95.175	Astatotilapia_calliptera
ENSXMAG00000008076	-	53	85.165	ENSAMXG00000006296	hnrnpa1a	88	63.253	Astyanax_mexicanus
ENSXMAG00000008076	-	53	63.277	ENSAMXG00000037730	-	56	62.827	Astyanax_mexicanus
ENSXMAG00000008076	-	90	77.170	ENSCSEG00000007589	hnrnpa1a	83	82.667	Cynoglossus_semilaevis
ENSXMAG00000008076	-	54	54.190	ENSCSEG00000014051	-	73	53.672	Cynoglossus_semilaevis
ENSXMAG00000008076	-	100	96.774	ENSCVAG00000012637	hnrnpa1a	100	96.774	Cyprinodon_variegatus
ENSXMAG00000008076	-	56	81.250	ENSDARG00000011020	hnrnpa1a	55	76.498	Danio_rerio
ENSXMAG00000008076	-	57	55.779	ENSDORG00000026425	-	59	52.036	Dipodomys_ordii
ENSXMAG00000008076	-	57	88.660	ENSELUG00000007372	-	53	89.583	Esox_lucius
ENSXMAG00000008076	-	54	88.043	ENSGMOG00000017950	hnrnpa1a	50	87.568	Gadus_morhua
ENSXMAG00000008076	-	53	61.453	ENSGMOG00000020353	-	98	61.376	Gadus_morhua
ENSXMAG00000008076	-	100	99.120	ENSGAFG00000007751	-	100	99.120	Gambusia_affinis
ENSXMAG00000008076	-	52	54.494	ENSGAFG00000016803	-	64	52.336	Gambusia_affinis
ENSXMAG00000008076	-	90	76.667	ENSGACG00000009435	-	87	82.264	Gasterosteus_aculeatus
ENSXMAG00000008076	-	90	87.702	ENSHBUG00000005647	hnrnpa1a	91	87.702	Haplochromis_burtoni
ENSXMAG00000008076	-	53	62.712	ENSIPUG00000001991	-	80	61.780	Ictalurus_punctatus
ENSXMAG00000008076	-	59	82.090	ENSIPUG00000002023	hnrnpa1a	75	85.000	Ictalurus_punctatus
ENSXMAG00000008076	-	57	84.021	ENSIPUG00000022440	-	74	84.393	Ictalurus_punctatus
ENSXMAG00000008076	-	53	66.111	ENSJJAG00000009178	-	63	58.190	Jaculus_jaculus
ENSXMAG00000008076	-	100	88.889	ENSKMAG00000020859	-	67	97.778	Kryptolebias_marmoratus
ENSXMAG00000008076	-	65	91.593	ENSLBEG00000010010	hnrnpa1a	66	92.105	Labrus_bergylta
ENSXMAG00000008076	-	62	71.739	ENSMFAG00000028351	-	65	64.758	Macaca_fascicularis
ENSXMAG00000008076	-	65	96.413	ENSMAMG00000007606	-	91	93.248	Mastacembelus_armatus
ENSXMAG00000008076	-	90	87.702	ENSMZEG00005027173	hnrnpa1a	91	87.702	Maylandia_zebra
ENSXMAG00000008076	-	59	92.500	ENSMMOG00000008251	hnrnpa1a	95	85.714	Mola_mola
ENSXMAG00000008076	-	52	55.932	ENSMALG00000008886	-	93	56.021	Monopterus_albus
ENSXMAG00000008076	-	65	96.413	ENSMALG00000014091	hnrnpa1a	65	96.000	Monopterus_albus
ENSXMAG00000008076	-	65	95.575	ENSNBRG00000018441	-	69	95.175	Neolamprologus_brichardi
ENSXMAG00000008076	-	56	57.979	ENSNBRG00000014469	-	87	57.979	Neolamprologus_brichardi
ENSXMAG00000008076	-	90	82.085	ENSORLG00000008001	-	69	96.460	Oryzias_latipes
ENSXMAG00000008076	-	52	51.412	ENSORLG00000029240	-	89	51.412	Oryzias_latipes
ENSXMAG00000008076	-	90	82.085	ENSORLG00020006582	hnrnpa1a	98	95.215	Oryzias_latipes_hni
ENSXMAG00000008076	-	88	42.193	ENSORLG00020006043	-	59	51.149	Oryzias_latipes_hni
ENSXMAG00000008076	-	52	51.412	ENSORLG00020022498	-	80	51.412	Oryzias_latipes_hni
ENSXMAG00000008076	-	90	82.410	ENSORLG00015022294	-	69	96.903	Oryzias_latipes_hsok
ENSXMAG00000008076	-	100	82.849	ENSOMEG00000015959	-	69	96.903	Oryzias_melastigma
ENSXMAG00000008076	-	52	58.960	ENSPMGG00000016392	-	93	58.960	Periophthalmus_magnuspinnatus
ENSXMAG00000008076	-	68	82.684	ENSPMGG00000011804	hnrnpa1a	79	88.426	Periophthalmus_magnuspinnatus
ENSXMAG00000008076	-	100	98.827	ENSPFOG00000001825	-	100	98.827	Poecilia_formosa
ENSXMAG00000008076	-	100	98.827	ENSPMEG00000002425	-	100	98.827	Poecilia_mexicana
ENSXMAG00000008076	-	56	57.979	ENSPNYG00000020729	-	95	57.979	Pundamilia_nyererei
ENSXMAG00000008076	-	55	82.979	ENSPNAG00000007752	hnrnpa1a	93	74.138	Pygocentrus_nattereri
ENSXMAG00000008076	-	55	86.096	ENSPNAG00000021630	-	92	60.000	Pygocentrus_nattereri
ENSXMAG00000008076	-	52	59.036	ENSSMAG00000010279	-	93	59.036	Scophthalmus_maximus
ENSXMAG00000008076	-	90	75.490	ENSSMAG00000004641	hnrnpa1a	89	76.471	Scophthalmus_maximus
ENSXMAG00000008076	-	52	55.682	ENSSMAG00000010246	-	88	51.142	Scophthalmus_maximus
ENSXMAG00000008076	-	89	99.371	ENSSDUG00000013908	hnrnpa1a	98	83.273	Seriola_dumerili
ENSXMAG00000008076	-	52	60.234	ENSSDUG00000002431	-	81	60.234	Seriola_dumerili
ENSXMAG00000008076	-	89	78.571	ENSSLDG00000003718	hnrnpa1a	94	89.848	Seriola_lalandi_dorsalis
ENSXMAG00000008076	-	90	83.172	ENSSPAG00000018518	-	68	94.667	Stegastes_partitus
ENSXMAG00000008076	-	65	89.238	ENSTRUG00000020491	-	69	88.546	Takifugu_rubripes
ENSXMAG00000008076	-	69	53.478	ENSTNIG00000007398	-	84	55.251	Tetraodon_nigroviridis
ENSXMAG00000008076	-	81	82.971	ENSXCOG00000009001	-	100	82.246	Xiphophorus_couchianus