EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008104 (Gene tree)
Gene ID: 102229499
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15522 bases
Position: chr10:6373474-6388995
Accession: 102229499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008121	TUDOR	PF00567.24	3.2e-105	1	4
ENSXMAP00000008121	TUDOR	PF00567.24	3.2e-105	2	4
ENSXMAP00000008121	TUDOR	PF00567.24	3.2e-105	3	4
ENSXMAP00000008121	TUDOR	PF00567.24	3.2e-105	4	4
ENSXMAP00000037856	TUDOR	PF00567.24	4.3e-101	1	4
ENSXMAP00000037856	TUDOR	PF00567.24	4.3e-101	2	4
ENSXMAP00000037856	TUDOR	PF00567.24	4.3e-101	3	4
ENSXMAP00000037856	TUDOR	PF00567.24	4.3e-101	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000032531	-	3120	-	ENSXMAP00000037856	1039 (aa)	-	-
ENSXMAT00000008131	-	3288	XM_014470761	ENSXMAP00000008121	1095 (aa)	XP_014326247	M4A0X7

Gene Model

Click here to download ENSXMAG00000008104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008104	tdrd1	97	34.213	ENSG00000095627	TDRD1	84	34.881	Homo_sapiens
ENSXMAG00000008104	tdrd1	100	56.792	ENSAPOG00000023199	tdrd1	99	56.792	Acanthochromis_polyacanthus
ENSXMAG00000008104	tdrd1	88	33.369	ENSAMEG00000015182	TDRD1	82	34.586	Ailuropoda_melanoleuca
ENSXMAG00000008104	tdrd1	100	59.099	ENSACIG00000010576	tdrd1	98	59.063	Amphilophus_citrinellus
ENSXMAG00000008104	tdrd1	99	56.747	ENSAOCG00000007059	tdrd1	100	55.610	Amphiprion_ocellaris
ENSXMAG00000008104	tdrd1	99	58.076	ENSAPEG00000017049	tdrd1	98	57.988	Amphiprion_percula
ENSXMAG00000008104	tdrd1	98	59.149	ENSATEG00000021627	tdrd1	96	59.062	Anabas_testudineus
ENSXMAG00000008104	tdrd1	94	32.749	ENSAPLG00000012609	TDRD1	93	33.718	Anas_platyrhynchos
ENSXMAG00000008104	tdrd1	92	32.219	ENSACAG00000009854	TDRD1	80	32.666	Anolis_carolinensis
ENSXMAG00000008104	tdrd1	95	34.804	ENSANAG00000035710	TDRD1	83	35.264	Aotus_nancymaae
ENSXMAG00000008104	tdrd1	100	55.054	ENSACLG00000014107	tdrd1	99	54.971	Astatotilapia_calliptera
ENSXMAG00000008104	tdrd1	93	45.421	ENSAMXG00000015146	tdrd1	84	46.815	Astyanax_mexicanus
ENSXMAG00000008104	tdrd1	88	33.233	ENSBTAG00000006855	TDRD1	83	33.539	Bos_taurus
ENSXMAG00000008104	tdrd1	95	34.739	ENSCJAG00000019270	TDRD1	84	35.356	Callithrix_jacchus
ENSXMAG00000008104	tdrd1	93	33.333	ENSCAFG00000011266	TDRD1	86	33.525	Canis_familiaris
ENSXMAG00000008104	tdrd1	93	33.333	ENSCAFG00020012373	TDRD1	86	33.525	Canis_lupus_dingo
ENSXMAG00000008104	tdrd1	89	33.932	ENSCHIG00000012766	TDRD1	84	34.356	Capra_hircus
ENSXMAG00000008104	tdrd1	92	32.700	ENSTSYG00000004935	TDRD1	80	33.944	Carlito_syrichta
ENSXMAG00000008104	tdrd1	87	33.441	ENSCPOG00000004190	TDRD1	81	33.844	Cavia_porcellus
ENSXMAG00000008104	tdrd1	92	34.639	ENSCCAG00000027375	TDRD1	84	35.166	Cebus_capucinus
ENSXMAG00000008104	tdrd1	95	34.765	ENSCATG00000035999	TDRD1	85	35.124	Cercocebus_atys
ENSXMAG00000008104	tdrd1	94	33.895	ENSCLAG00000003935	TDRD1	81	34.736	Chinchilla_lanigera
ENSXMAG00000008104	tdrd1	95	34.965	ENSCSAG00000005071	TDRD1	83	35.227	Chlorocebus_sabaeus
ENSXMAG00000008104	tdrd1	94	42.675	ENSCHOG00000001690	TDRD1	70	42.675	Choloepus_hoffmanni
ENSXMAG00000008104	tdrd1	90	34.466	ENSCPBG00000003780	TDRD1	83	35.782	Chrysemys_picta_bellii
ENSXMAG00000008104	tdrd1	95	34.765	ENSCANG00000035172	TDRD1	83	34.995	Colobus_angolensis_palliatus
ENSXMAG00000008104	tdrd1	88	33.902	ENSCGRG00001004632	Tdrd1	84	34.436	Cricetulus_griseus_chok1gshd
ENSXMAG00000008104	tdrd1	91	33.174	ENSCGRG00000004981	Tdrd1	81	33.605	Cricetulus_griseus_crigri
ENSXMAG00000008104	tdrd1	94	48.084	ENSCSEG00000006983	tdrd1	91	49.801	Cynoglossus_semilaevis
ENSXMAG00000008104	tdrd1	94	62.189	ENSCVAG00000020980	tdrd1	99	62.189	Cyprinodon_variegatus
ENSXMAG00000008104	tdrd1	92	44.381	ENSDARG00000007465	tdrd1	83	46.201	Danio_rerio
ENSXMAG00000008104	tdrd1	94	34.677	ENSDNOG00000012114	TDRD1	79	35.258	Dasypus_novemcinctus
ENSXMAG00000008104	tdrd1	93	31.792	ENSDORG00000009986	Tdrd1	86	32.665	Dipodomys_ordii
ENSXMAG00000008104	tdrd1	86	33.814	ENSETEG00000020143	TDRD1	85	30.892	Echinops_telfairi
ENSXMAG00000008104	tdrd1	55	34.677	ENSEBUG00000003519	-	95	34.677	Eptatretus_burgeri
ENSXMAG00000008104	tdrd1	94	33.049	ENSEASG00005014802	TDRD1	82	34.304	Equus_asinus_asinus
ENSXMAG00000008104	tdrd1	88	42.537	ENSECAG00000009748	TDRD1	79	42.537	Equus_caballus
ENSXMAG00000008104	tdrd1	91	34.095	ENSEEUG00000010076	TDRD1	81	34.871	Erinaceus_europaeus
ENSXMAG00000008104	tdrd1	98	44.358	ENSELUG00000024364	tdrd1	96	44.377	Esox_lucius
ENSXMAG00000008104	tdrd1	94	34.277	ENSFCAG00000000632	TDRD1	83	34.611	Felis_catus
ENSXMAG00000008104	tdrd1	76	32.666	ENSFALG00000002237	TDRD1	89	31.977	Ficedula_albicollis
ENSXMAG00000008104	tdrd1	94	33.828	ENSFDAG00000013225	TDRD1	82	34.636	Fukomys_damarensis
ENSXMAG00000008104	tdrd1	99	50.879	ENSFHEG00000009203	tdrd1	99	50.185	Fundulus_heteroclitus
ENSXMAG00000008104	tdrd1	77	56.044	ENSGMOG00000016797	-	67	56.701	Gadus_morhua
ENSXMAG00000008104	tdrd1	90	30.395	ENSGALG00000046180	TDRD1	88	30.754	Gallus_gallus
ENSXMAG00000008104	tdrd1	100	86.661	ENSGAFG00000002668	tdrd1	100	86.661	Gambusia_affinis
ENSXMAG00000008104	tdrd1	84	57.627	ENSGACG00000006590	tdrd1	100	58.434	Gasterosteus_aculeatus
ENSXMAG00000008104	tdrd1	95	34.531	ENSGGOG00000004250	TDRD1	83	34.881	Gorilla_gorilla
ENSXMAG00000008104	tdrd1	100	56.759	ENSHBUG00000005216	tdrd1	98	55.729	Haplochromis_burtoni
ENSXMAG00000008104	tdrd1	94	30.452	ENSHGLG00000010877	TDRD1	85	31.564	Heterocephalus_glaber_female
ENSXMAG00000008104	tdrd1	94	33.123	ENSHGLG00100013857	TDRD1	88	34.047	Heterocephalus_glaber_male
ENSXMAG00000008104	tdrd1	94	44.751	ENSHCOG00000002840	tdrd1	91	44.531	Hippocampus_comes
ENSXMAG00000008104	tdrd1	100	44.804	ENSIPUG00000017232	tdrd1	96	46.925	Ictalurus_punctatus
ENSXMAG00000008104	tdrd1	91	34.969	ENSSTOG00000003221	TDRD1	84	35.146	Ictidomys_tridecemlineatus
ENSXMAG00000008104	tdrd1	88	34.760	ENSJJAG00000014720	Tdrd1	84	35.021	Jaculus_jaculus
ENSXMAG00000008104	tdrd1	94	61.239	ENSKMAG00000018558	tdrd1	99	61.785	Kryptolebias_marmoratus
ENSXMAG00000008104	tdrd1	98	59.272	ENSLBEG00000004161	tdrd1	98	56.667	Labrus_bergylta
ENSXMAG00000008104	tdrd1	94	32.524	ENSLACG00000011559	TDRD1	85	32.870	Latimeria_chalumnae
ENSXMAG00000008104	tdrd1	93	39.020	ENSLOCG00000012030	tdrd1	100	41.602	Lepisosteus_oculatus
ENSXMAG00000008104	tdrd1	84	35.783	ENSLAFG00000011575	TDRD1	95	35.390	Loxodonta_africana
ENSXMAG00000008104	tdrd1	95	34.865	ENSMFAG00000043487	TDRD1	84	35.124	Macaca_fascicularis
ENSXMAG00000008104	tdrd1	95	34.865	ENSMMUG00000022517	TDRD1	83	35.124	Macaca_mulatta
ENSXMAG00000008104	tdrd1	95	34.865	ENSMNEG00000031108	TDRD1	84	35.124	Macaca_nemestrina
ENSXMAG00000008104	tdrd1	95	34.765	ENSMLEG00000032281	TDRD1	83	35.021	Mandrillus_leucophaeus
ENSXMAG00000008104	tdrd1	99	57.904	ENSMAMG00000015287	tdrd1	99	57.750	Mastacembelus_armatus
ENSXMAG00000008104	tdrd1	100	54.774	ENSMZEG00005025315	tdrd1	99	54.690	Maylandia_zebra
ENSXMAG00000008104	tdrd1	87	31.385	ENSMGAG00000011067	TDRD1	97	31.078	Meleagris_gallopavo
ENSXMAG00000008104	tdrd1	77	36.029	ENSMAUG00000012164	Tdrd1	77	36.029	Mesocricetus_auratus
ENSXMAG00000008104	tdrd1	97	34.403	ENSMICG00000016190	TDRD1	85	34.604	Microcebus_murinus
ENSXMAG00000008104	tdrd1	93	32.414	ENSMOCG00000022360	Tdrd1	85	32.379	Microtus_ochrogaster
ENSXMAG00000008104	tdrd1	99	54.450	ENSMMOG00000014068	tdrd1	99	53.627	Mola_mola
ENSXMAG00000008104	tdrd1	93	31.965	ENSMODG00000009788	TDRD1	85	31.965	Monodelphis_domestica
ENSXMAG00000008104	tdrd1	99	55.872	ENSMALG00000022115	tdrd1	98	56.769	Monopterus_albus
ENSXMAG00000008104	tdrd1	91	33.302	MGP_CAROLIEiJ_G0023095	Tdrd1	83	33.531	Mus_caroli
ENSXMAG00000008104	tdrd1	91	33.589	ENSMUSG00000025081	Tdrd1	84	33.959	Mus_musculus
ENSXMAG00000008104	tdrd1	92	32.731	MGP_PahariEiJ_G0014583	Tdrd1	85	31.939	Mus_pahari
ENSXMAG00000008104	tdrd1	92	33.235	MGP_SPRETEiJ_G0024016	Tdrd1	83	33.927	Mus_spretus
ENSXMAG00000008104	tdrd1	90	33.367	ENSMPUG00000001987	TDRD1	75	35.723	Mustela_putorius_furo
ENSXMAG00000008104	tdrd1	88	34.134	ENSNGAG00000015231	Tdrd1	85	34.647	Nannospalax_galili
ENSXMAG00000008104	tdrd1	99	56.979	ENSNBRG00000017920	tdrd1	98	56.890	Neolamprologus_brichardi
ENSXMAG00000008104	tdrd1	97	33.051	ENSNLEG00000016228	TDRD1	83	33.849	Nomascus_leucogenys
ENSXMAG00000008104	tdrd1	86	31.333	ENSMEUG00000007717	TDRD1	82	31.333	Notamacropus_eugenii
ENSXMAG00000008104	tdrd1	93	33.145	ENSOPRG00000009180	TDRD1	85	33.365	Ochotona_princeps
ENSXMAG00000008104	tdrd1	91	32.885	ENSODEG00000011965	TDRD1	83	33.367	Octodon_degus
ENSXMAG00000008104	tdrd1	99	56.894	ENSONIG00000016382	tdrd1	100	56.806	Oreochromis_niloticus
ENSXMAG00000008104	tdrd1	88	33.860	ENSOANG00000001562	TDRD1	84	33.860	Ornithorhynchus_anatinus
ENSXMAG00000008104	tdrd1	88	33.368	ENSOCUG00000025327	TDRD1	86	33.773	Oryctolagus_cuniculus
ENSXMAG00000008104	tdrd1	96	54.404	ENSORLG00000004833	tdrd1	96	54.404	Oryzias_latipes
ENSXMAG00000008104	tdrd1	94	55.608	ENSORLG00020019231	tdrd1	92	57.347	Oryzias_latipes_hni
ENSXMAG00000008104	tdrd1	94	55.756	ENSORLG00015017184	tdrd1	92	55.756	Oryzias_latipes_hsok
ENSXMAG00000008104	tdrd1	98	54.373	ENSOMEG00000023637	tdrd1	93	54.201	Oryzias_melastigma
ENSXMAG00000008104	tdrd1	96	33.402	ENSOGAG00000001370	TDRD1	83	34.820	Otolemur_garnettii
ENSXMAG00000008104	tdrd1	89	33.733	ENSOARG00000014200	-	83	34.151	Ovis_aries
ENSXMAG00000008104	tdrd1	97	34.213	ENSPPAG00000041621	TDRD1	83	34.881	Pan_paniscus
ENSXMAG00000008104	tdrd1	94	34.242	ENSPPRG00000000191	TDRD1	83	34.576	Panthera_pardus
ENSXMAG00000008104	tdrd1	94	34.423	ENSPTIG00000010264	TDRD1	84	34.660	Panthera_tigris_altaica
ENSXMAG00000008104	tdrd1	97	34.213	ENSPTRG00000002958	TDRD1	83	34.881	Pan_troglodytes
ENSXMAG00000008104	tdrd1	95	34.635	ENSPANG00000020752	TDRD1	87	34.917	Papio_anubis
ENSXMAG00000008104	tdrd1	93	42.508	ENSPKIG00000010586	tdrd1	86	42.508	Paramormyrops_kingsleyae
ENSXMAG00000008104	tdrd1	87	33.900	ENSPSIG00000014655	TDRD1	77	34.672	Pelodiscus_sinensis
ENSXMAG00000008104	tdrd1	89	49.407	ENSPMGG00000018890	tdrd1	100	50.161	Periophthalmus_magnuspinnatus
ENSXMAG00000008104	tdrd1	92	33.807	ENSPEMG00000004582	Tdrd1	86	34.018	Peromyscus_maniculatus_bairdii
ENSXMAG00000008104	tdrd1	97	32.848	ENSPCIG00000009739	TDRD1	83	33.474	Phascolarctos_cinereus
ENSXMAG00000008104	tdrd1	94	86.010	ENSPFOG00000002145	tdrd1	100	85.887	Poecilia_formosa
ENSXMAG00000008104	tdrd1	100	84.760	ENSPLAG00000010241	tdrd1	100	84.760	Poecilia_latipinna
ENSXMAG00000008104	tdrd1	100	83.305	ENSPMEG00000021893	tdrd1	100	83.305	Poecilia_mexicana
ENSXMAG00000008104	tdrd1	98	89.214	ENSPREG00000022663	tdrd1	100	85.360	Poecilia_reticulata
ENSXMAG00000008104	tdrd1	89	33.865	ENSPPYG00000002671	TDRD1	83	34.192	Pongo_abelii
ENSXMAG00000008104	tdrd1	90	30.845	ENSPCAG00000006692	TDRD1	73	32.159	Procavia_capensis
ENSXMAG00000008104	tdrd1	97	34.137	ENSPCOG00000026619	TDRD1	83	34.298	Propithecus_coquereli
ENSXMAG00000008104	tdrd1	95	33.766	ENSPVAG00000003055	TDRD1	83	34.126	Pteropus_vampyrus
ENSXMAG00000008104	tdrd1	100	55.317	ENSPNYG00000001706	tdrd1	99	55.232	Pundamilia_nyererei
ENSXMAG00000008104	tdrd1	94	45.534	ENSPNAG00000005831	tdrd1	92	46.411	Pygocentrus_nattereri
ENSXMAG00000008104	tdrd1	91	33.000	ENSRNOG00000017064	Tdrd1	86	33.694	Rattus_norvegicus
ENSXMAG00000008104	tdrd1	97	34.388	ENSRBIG00000029668	TDRD1	85	35.021	Rhinopithecus_bieti
ENSXMAG00000008104	tdrd1	97	34.355	ENSRROG00000043379	TDRD1	83	35.021	Rhinopithecus_roxellana
ENSXMAG00000008104	tdrd1	92	34.635	ENSSBOG00000023561	TDRD1	83	35.130	Saimiri_boliviensis_boliviensis
ENSXMAG00000008104	tdrd1	93	32.454	ENSSHAG00000014311	TDRD1	87	32.454	Sarcophilus_harrisii
ENSXMAG00000008104	tdrd1	95	39.269	ENSSFOG00015022020	tdrd1	94	41.085	Scleropages_formosus
ENSXMAG00000008104	tdrd1	100	58.002	ENSSMAG00000019271	tdrd1	98	57.243	Scophthalmus_maximus
ENSXMAG00000008104	tdrd1	94	61.148	ENSSDUG00000022012	tdrd1	95	60.902	Seriola_dumerili
ENSXMAG00000008104	tdrd1	94	60.964	ENSSLDG00000006423	tdrd1	97	60.907	Seriola_lalandi_dorsalis
ENSXMAG00000008104	tdrd1	87	37.413	ENSSARG00000008828	TDRD1	66	37.238	Sorex_araneus
ENSXMAG00000008104	tdrd1	90	32.983	ENSSPUG00000005015	TDRD1	82	33.716	Sphenodon_punctatus
ENSXMAG00000008104	tdrd1	100	56.245	ENSSPAG00000018805	tdrd1	99	56.157	Stegastes_partitus
ENSXMAG00000008104	tdrd1	93	32.834	ENSSSCG00000021075	TDRD1	85	33.108	Sus_scrofa
ENSXMAG00000008104	tdrd1	76	34.732	ENSTGUG00000010905	TDRD1	91	34.119	Taeniopygia_guttata
ENSXMAG00000008104	tdrd1	93	52.032	ENSTRUG00000012142	tdrd1	100	52.032	Takifugu_rubripes
ENSXMAG00000008104	tdrd1	92	44.789	ENSTNIG00000018898	tdrd1	100	44.900	Tetraodon_nigroviridis
ENSXMAG00000008104	tdrd1	94	38.710	ENSTBEG00000014417	-	84	32.295	Tupaia_belangeri
ENSXMAG00000008104	tdrd1	93	30.830	ENSTTRG00000010147	TDRD1	82	31.330	Tursiops_truncatus
ENSXMAG00000008104	tdrd1	88	33.702	ENSUAMG00000009025	TDRD1	82	34.168	Ursus_americanus
ENSXMAG00000008104	tdrd1	88	33.369	ENSUMAG00000000705	TDRD1	83	33.369	Ursus_maritimus
ENSXMAG00000008104	tdrd1	84	34.245	ENSVPAG00000004000	TDRD1	80	34.783	Vicugna_pacos
ENSXMAG00000008104	tdrd1	91	33.462	ENSVVUG00000009750	TDRD1	86	33.462	Vulpes_vulpes
ENSXMAG00000008104	tdrd1	86	99.769	ENSXCOG00000006412	tdrd1	100	99.769	Xiphophorus_couchianus