EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008138 (Gene tree)
Gene ID: 102235881
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 10203 bases
Position: chr16:4668340-4678542
Accession: 102235881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008175	ResIII	PF04851.15	1.6e-06	1	1
ENSXMAP00000008175	DEAD	PF00270.29	3.9e-48	1	1
ENSXMAP00000030026	DEAD	PF00270.29	2.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000036438	-	3395	-	ENSXMAP00000030026	883 (aa)	-	-
ENSXMAT00000008185	-	3443	XM_005796652	ENSXMAP00000008175	899 (aa)	XP_005796709	M4A131

Gene Model

Click here to download ENSXMAG00000008138's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008138	ddx42	99	71.444	ENSG00000198231	DDX42	100	77.143	Homo_sapiens
ENSXMAG00000008138	ddx42	91	92.029	ENSAPOG00000017675	ddx42	97	90.708	Acanthochromis_polyacanthus
ENSXMAG00000008138	ddx42	100	72.204	ENSAMEG00000003200	DDX42	100	70.262	Ailuropoda_melanoleuca
ENSXMAG00000008138	ddx42	85	87.206	ENSACIG00000007376	ddx42	99	89.164	Amphilophus_citrinellus
ENSXMAG00000008138	ddx42	100	87.622	ENSAOCG00000003520	ddx42	100	90.424	Amphiprion_ocellaris
ENSXMAG00000008138	ddx42	100	88.004	ENSAPEG00000000984	ddx42	100	90.164	Amphiprion_percula
ENSXMAG00000008138	ddx42	100	89.572	ENSATEG00000022920	ddx42	100	87.816	Anabas_testudineus
ENSXMAG00000008138	ddx42	99	71.580	ENSAPLG00000010544	DDX42	99	71.949	Anas_platyrhynchos
ENSXMAG00000008138	ddx42	99	72.874	ENSACAG00000003994	DDX42	99	71.996	Anolis_carolinensis
ENSXMAG00000008138	ddx42	99	72.572	ENSANAG00000035693	DDX42	99	76.412	Aotus_nancymaae
ENSXMAG00000008138	ddx42	100	88.009	ENSACLG00000025113	ddx42	100	88.999	Astatotilapia_calliptera
ENSXMAG00000008138	ddx42	88	80.025	ENSAMXG00000011435	ddx42	100	76.458	Astyanax_mexicanus
ENSXMAG00000008138	ddx42	100	71.188	ENSBTAG00000021058	DDX42	92	80.640	Bos_taurus
ENSXMAG00000008138	ddx42	68	52.680	WBGene00008119	C46F11.4	80	53.272	Caenorhabditis_elegans
ENSXMAG00000008138	ddx42	99	72.679	ENSCJAG00000019649	DDX42	100	78.742	Callithrix_jacchus
ENSXMAG00000008138	ddx42	99	72.140	ENSCAFG00000012818	DDX42	100	71.142	Canis_familiaris
ENSXMAG00000008138	ddx42	99	72.140	ENSCAFG00020026631	DDX42	100	71.142	Canis_lupus_dingo
ENSXMAG00000008138	ddx42	100	73.355	ENSCHIG00000014431	DDX42	100	72.086	Capra_hircus
ENSXMAG00000008138	ddx42	100	71.640	ENSTSYG00000001380	DDX42	100	69.916	Carlito_syrichta
ENSXMAG00000008138	ddx42	74	60.593	ENSCAPG00000013621	DDX42	93	60.593	Cavia_aperea
ENSXMAG00000008138	ddx42	100	72.252	ENSCPOG00000005633	DDX42	100	72.395	Cavia_porcellus
ENSXMAG00000008138	ddx42	99	67.869	ENSCCAG00000020612	DDX42	91	80.916	Cebus_capucinus
ENSXMAG00000008138	ddx42	99	72.708	ENSCATG00000030490	DDX42	100	70.675	Cercocebus_atys
ENSXMAG00000008138	ddx42	99	72.650	ENSCLAG00000003497	DDX42	100	71.186	Chinchilla_lanigera
ENSXMAG00000008138	ddx42	99	68.206	ENSCSAG00000003914	DDX42	100	67.366	Chlorocebus_sabaeus
ENSXMAG00000008138	ddx42	64	84.821	ENSCHOG00000006241	DDX42	61	88.462	Choloepus_hoffmanni
ENSXMAG00000008138	ddx42	99	72.689	ENSCPBG00000026682	DDX42	99	71.609	Chrysemys_picta_bellii
ENSXMAG00000008138	ddx42	50	65.848	ENSCING00000001837	-	94	67.674	Ciona_intestinalis
ENSXMAG00000008138	ddx42	99	72.708	ENSCANG00000034663	DDX42	94	80.880	Colobus_angolensis_palliatus
ENSXMAG00000008138	ddx42	99	72.698	ENSCGRG00001009775	Ddx42	100	71.627	Cricetulus_griseus_chok1gshd
ENSXMAG00000008138	ddx42	99	72.698	ENSCGRG00000011718	Ddx42	100	71.627	Cricetulus_griseus_crigri
ENSXMAG00000008138	ddx42	100	86.059	ENSCSEG00000021574	ddx42	100	86.169	Cynoglossus_semilaevis
ENSXMAG00000008138	ddx42	100	94.118	ENSCVAG00000011404	ddx42	100	94.784	Cyprinodon_variegatus
ENSXMAG00000008138	ddx42	100	77.957	ENSDARG00000037928	ddx42	100	78.172	Danio_rerio
ENSXMAG00000008138	ddx42	99	70.096	ENSDNOG00000007961	DDX42	100	69.593	Dasypus_novemcinctus
ENSXMAG00000008138	ddx42	99	65.778	ENSDORG00000004199	Ddx42	100	64.021	Dipodomys_ordii
ENSXMAG00000008138	ddx42	68	60.714	FBgn0036104	CG6418	93	54.178	Drosophila_melanogaster
ENSXMAG00000008138	ddx42	85	71.923	ENSEBUG00000001155	ddx42	93	71.630	Eptatretus_burgeri
ENSXMAG00000008138	ddx42	99	71.928	ENSEASG00005013089	DDX42	93	81.241	Equus_asinus_asinus
ENSXMAG00000008138	ddx42	99	71.520	ENSECAG00000022684	DDX42	100	70.755	Equus_caballus
ENSXMAG00000008138	ddx42	60	89.189	ENSEEUG00000009144	DDX42	73	93.939	Erinaceus_europaeus
ENSXMAG00000008138	ddx42	100	81.116	ENSELUG00000020593	ddx42	100	79.763	Esox_lucius
ENSXMAG00000008138	ddx42	99	71.732	ENSFCAG00000003499	DDX42	100	71.535	Felis_catus
ENSXMAG00000008138	ddx42	98	70.671	ENSFALG00000004675	DDX42	79	72.191	Ficedula_albicollis
ENSXMAG00000008138	ddx42	100	72.756	ENSFDAG00000020516	DDX42	100	70.798	Fukomys_damarensis
ENSXMAG00000008138	ddx42	100	92.920	ENSFHEG00000023290	ddx42	100	93.473	Fundulus_heteroclitus
ENSXMAG00000008138	ddx42	78	83.546	ENSGMOG00000004595	ddx42	88	83.830	Gadus_morhua
ENSXMAG00000008138	ddx42	99	71.022	ENSGALG00000000581	DDX42	100	71.263	Gallus_gallus
ENSXMAG00000008138	ddx42	97	97.600	ENSGAFG00000011846	ddx42	97	97.600	Gambusia_affinis
ENSXMAG00000008138	ddx42	100	82.418	ENSGACG00000009782	ddx42	100	79.451	Gasterosteus_aculeatus
ENSXMAG00000008138	ddx42	99	72.316	ENSGAGG00000024411	DDX42	99	71.218	Gopherus_agassizii
ENSXMAG00000008138	ddx42	99	72.843	ENSGGOG00000006779	DDX42	91	80.945	Gorilla_gorilla
ENSXMAG00000008138	ddx42	100	87.789	ENSHBUG00000008705	ddx42	100	88.779	Haplochromis_burtoni
ENSXMAG00000008138	ddx42	99	68.823	ENSHGLG00000010024	DDX42	100	67.298	Heterocephalus_glaber_female
ENSXMAG00000008138	ddx42	89	56.348	ENSHGLG00100007138	-	84	58.323	Heterocephalus_glaber_male
ENSXMAG00000008138	ddx42	99	71.809	ENSHGLG00100004479	-	100	70.514	Heterocephalus_glaber_male
ENSXMAG00000008138	ddx42	100	78.603	ENSHCOG00000003357	ddx42	100	77.938	Hippocampus_comes
ENSXMAG00000008138	ddx42	100	78.907	ENSIPUG00000013327	ddx42	100	77.646	Ictalurus_punctatus
ENSXMAG00000008138	ddx42	99	72.252	ENSSTOG00000008922	DDX42	100	71.368	Ictidomys_tridecemlineatus
ENSXMAG00000008138	ddx42	100	72.240	ENSJJAG00000011727	Ddx42	100	71.383	Jaculus_jaculus
ENSXMAG00000008138	ddx42	100	90.340	ENSKMAG00000009914	ddx42	100	90.999	Kryptolebias_marmoratus
ENSXMAG00000008138	ddx42	100	77.473	ENSLBEG00000004687	ddx42	100	78.299	Labrus_bergylta
ENSXMAG00000008138	ddx42	99	72.649	ENSLACG00000013476	DDX42	97	72.649	Latimeria_chalumnae
ENSXMAG00000008138	ddx42	100	79.521	ENSLOCG00000011764	ddx42	100	79.085	Lepisosteus_oculatus
ENSXMAG00000008138	ddx42	100	73.019	ENSLAFG00000003249	DDX42	100	72.484	Loxodonta_africana
ENSXMAG00000008138	ddx42	99	72.708	ENSMFAG00000031356	DDX42	100	70.719	Macaca_fascicularis
ENSXMAG00000008138	ddx42	99	73.048	ENSMMUG00000016762	DDX42	96	77.077	Macaca_mulatta
ENSXMAG00000008138	ddx42	99	72.708	ENSMNEG00000038250	DDX42	100	70.719	Macaca_nemestrina
ENSXMAG00000008138	ddx42	99	71.414	ENSMLEG00000043080	DDX42	100	70.570	Mandrillus_leucophaeus
ENSXMAG00000008138	ddx42	91	90.303	ENSMAMG00000021888	ddx42	98	88.178	Mastacembelus_armatus
ENSXMAG00000008138	ddx42	100	88.009	ENSMZEG00005023103	ddx42	100	88.999	Maylandia_zebra
ENSXMAG00000008138	ddx42	99	71.128	ENSMGAG00000001822	DDX42	100	70.961	Meleagris_gallopavo
ENSXMAG00000008138	ddx42	77	77.433	ENSMAUG00000020774	-	94	77.433	Mesocricetus_auratus
ENSXMAG00000008138	ddx42	100	71.520	ENSMICG00000009952	DDX42	100	70.199	Microcebus_murinus
ENSXMAG00000008138	ddx42	99	72.659	ENSMOCG00000015504	Ddx42	99	71.875	Microtus_ochrogaster
ENSXMAG00000008138	ddx42	95	84.371	ENSMMOG00000016963	ddx42	85	85.905	Mola_mola
ENSXMAG00000008138	ddx42	52	84.648	ENSMODG00000009917	-	98	84.435	Monodelphis_domestica
ENSXMAG00000008138	ddx42	100	90.244	ENSMALG00000007800	ddx42	100	89.800	Monopterus_albus
ENSXMAG00000008138	ddx42	99	72.270	MGP_CAROLIEiJ_G0017314	Ddx42	99	71.520	Mus_caroli
ENSXMAG00000008138	ddx42	99	72.270	ENSMUSG00000020705	Ddx42	100	71.811	Mus_musculus
ENSXMAG00000008138	ddx42	75	84.942	MGP_PahariEiJ_G0018444	-	94	85.650	Mus_pahari
ENSXMAG00000008138	ddx42	99	72.484	MGP_SPRETEiJ_G0018158	Ddx42	100	71.658	Mus_spretus
ENSXMAG00000008138	ddx42	99	72.034	ENSMPUG00000014921	DDX42	100	71.050	Mustela_putorius_furo
ENSXMAG00000008138	ddx42	99	69.969	ENSMLUG00000011645	DDX42	100	70.397	Myotis_lucifugus
ENSXMAG00000008138	ddx42	99	72.854	ENSNGAG00000021897	Ddx42	100	72.168	Nannospalax_galili
ENSXMAG00000008138	ddx42	100	86.549	ENSNBRG00000004466	ddx42	100	87.431	Neolamprologus_brichardi
ENSXMAG00000008138	ddx42	99	72.892	ENSNLEG00000004248	DDX42	93	80.793	Nomascus_leucogenys
ENSXMAG00000008138	ddx42	77	71.012	ENSMEUG00000013227	-	71	71.012	Notamacropus_eugenii
ENSXMAG00000008138	ddx42	100	71.247	ENSOPRG00000014960	DDX42	100	71.338	Ochotona_princeps
ENSXMAG00000008138	ddx42	100	69.394	ENSODEG00000007810	DDX42	100	68.114	Octodon_degus
ENSXMAG00000008138	ddx42	100	87.679	ENSONIG00000000734	ddx42	100	88.889	Oreochromis_niloticus
ENSXMAG00000008138	ddx42	60	82.963	ENSOANG00000000265	DDX42	100	82.963	Ornithorhynchus_anatinus
ENSXMAG00000008138	ddx42	95	73.111	ENSOCUG00000004304	DDX42	85	74.253	Oryctolagus_cuniculus
ENSXMAG00000008138	ddx42	100	88.729	ENSORLG00000002395	ddx42	98	90.718	Oryzias_latipes
ENSXMAG00000008138	ddx42	100	90.508	ENSORLG00020011621	ddx42	100	90.066	Oryzias_latipes_hni
ENSXMAG00000008138	ddx42	100	90.508	ENSORLG00015004487	ddx42	100	90.066	Oryzias_latipes_hsok
ENSXMAG00000008138	ddx42	100	89.636	ENSOMEG00000020093	ddx42	100	89.967	Oryzias_melastigma
ENSXMAG00000008138	ddx42	99	71.732	ENSOGAG00000006872	DDX42	100	71.170	Otolemur_garnettii
ENSXMAG00000008138	ddx42	100	71.429	ENSOARG00000013540	DDX42	100	71.174	Ovis_aries
ENSXMAG00000008138	ddx42	99	72.630	ENSPPAG00000007496	DDX42	91	80.952	Pan_paniscus
ENSXMAG00000008138	ddx42	99	71.945	ENSPPRG00000002740	DDX42	100	71.748	Panthera_pardus
ENSXMAG00000008138	ddx42	99	71.991	ENSPTIG00000009932	DDX42	100	71.247	Panthera_tigris_altaica
ENSXMAG00000008138	ddx42	99	72.630	ENSPTRG00000009523	DDX42	91	80.952	Pan_troglodytes
ENSXMAG00000008138	ddx42	99	72.814	ENSPANG00000020990	DDX42	100	70.359	Papio_anubis
ENSXMAG00000008138	ddx42	100	78.524	ENSPKIG00000002901	ddx42	100	76.873	Paramormyrops_kingsleyae
ENSXMAG00000008138	ddx42	86	79.848	ENSPSIG00000010289	DDX42	96	79.620	Pelodiscus_sinensis
ENSXMAG00000008138	ddx42	92	83.454	ENSPMGG00000009323	ddx42	100	80.132	Periophthalmus_magnuspinnatus
ENSXMAG00000008138	ddx42	99	72.524	ENSPEMG00000006755	Ddx42	100	71.474	Peromyscus_maniculatus_bairdii
ENSXMAG00000008138	ddx42	86	72.365	ENSPMAG00000005580	ddx42	99	71.080	Petromyzon_marinus
ENSXMAG00000008138	ddx42	100	72.421	ENSPCIG00000009093	DDX42	100	71.338	Phascolarctos_cinereus
ENSXMAG00000008138	ddx42	100	96.108	ENSPFOG00000014104	ddx42	100	96.000	Poecilia_formosa
ENSXMAG00000008138	ddx42	100	95.784	ENSPLAG00000010522	ddx42	100	95.676	Poecilia_latipinna
ENSXMAG00000008138	ddx42	100	95.606	ENSPMEG00000010744	ddx42	100	95.606	Poecilia_mexicana
ENSXMAG00000008138	ddx42	100	93.943	ENSPREG00000009926	ddx42	100	93.943	Poecilia_reticulata
ENSXMAG00000008138	ddx42	99	69.255	ENSPPYG00000008531	DDX42	100	68.737	Pongo_abelii
ENSXMAG00000008138	ddx42	92	67.049	ENSPCAG00000002474	DDX42	100	66.127	Procavia_capensis
ENSXMAG00000008138	ddx42	99	63.220	ENSPCOG00000001559	DDX42	92	73.095	Propithecus_coquereli
ENSXMAG00000008138	ddx42	100	70.351	ENSPVAG00000000160	DDX42	100	67.430	Pteropus_vampyrus
ENSXMAG00000008138	ddx42	84	88.016	ENSPNYG00000013954	ddx42	97	88.815	Pundamilia_nyererei
ENSXMAG00000008138	ddx42	88	81.432	ENSPNAG00000017352	ddx42	100	78.105	Pygocentrus_nattereri
ENSXMAG00000008138	ddx42	99	72.163	ENSRNOG00000009474	Ddx42	100	71.337	Rattus_norvegicus
ENSXMAG00000008138	ddx42	99	72.601	ENSRBIG00000004781	DDX42	94	80.572	Rhinopithecus_bieti
ENSXMAG00000008138	ddx42	99	72.601	ENSRROG00000029794	DDX42	100	70.675	Rhinopithecus_roxellana
ENSXMAG00000008138	ddx42	99	72.650	ENSSBOG00000029624	DDX42	91	80.916	Saimiri_boliviensis_boliviensis
ENSXMAG00000008138	ddx42	70	49.623	ENSSHAG00000007919	-	99	49.398	Sarcophilus_harrisii
ENSXMAG00000008138	ddx42	100	72.421	ENSSHAG00000012896	-	100	71.338	Sarcophilus_harrisii
ENSXMAG00000008138	ddx42	80	88.292	ENSSFOG00015014064	ddx42	80	87.952	Scleropages_formosus
ENSXMAG00000008138	ddx42	100	86.075	ENSSMAG00000009077	ddx42	100	85.867	Scophthalmus_maximus
ENSXMAG00000008138	ddx42	100	90.110	ENSSDUG00000022221	ddx42	100	89.011	Seriola_dumerili
ENSXMAG00000008138	ddx42	100	89.135	ENSSLDG00000018483	ddx42	100	87.805	Seriola_lalandi_dorsalis
ENSXMAG00000008138	ddx42	99	71.185	ENSSARG00000009847	DDX42	100	70.971	Sorex_araneus
ENSXMAG00000008138	ddx42	99	73.825	ENSSPUG00000018806	DDX42	99	73.611	Sphenodon_punctatus
ENSXMAG00000008138	ddx42	100	89.890	ENSSPAG00000013055	ddx42	100	91.538	Stegastes_partitus
ENSXMAG00000008138	ddx42	85	71.218	ENSSSCG00000017289	DDX42	97	70.849	Sus_scrofa
ENSXMAG00000008138	ddx42	99	72.204	ENSTGUG00000001931	DDX42	100	71.429	Taeniopygia_guttata
ENSXMAG00000008138	ddx42	100	85.111	ENSTRUG00000010711	ddx42	99	91.461	Takifugu_rubripes
ENSXMAG00000008138	ddx42	83	77.116	ENSTBEG00000010159	DDX42	99	76.852	Tupaia_belangeri
ENSXMAG00000008138	ddx42	100	71.852	ENSTTRG00000006962	DDX42	100	70.964	Tursiops_truncatus
ENSXMAG00000008138	ddx42	100	71.792	ENSUAMG00000007321	DDX42	100	71.732	Ursus_americanus
ENSXMAG00000008138	ddx42	100	71.642	ENSUMAG00000017438	DDX42	100	70.335	Ursus_maritimus
ENSXMAG00000008138	ddx42	93	75.168	ENSVPAG00000009633	DDX42	94	73.826	Vicugna_pacos
ENSXMAG00000008138	ddx42	99	72.388	ENSVVUG00000006095	DDX42	100	71.748	Vulpes_vulpes
ENSXMAG00000008138	ddx42	100	71.882	ENSXETG00000003245	ddx42	100	71.172	Xenopus_tropicalis
ENSXMAG00000008138	ddx42	85	99.342	ENSXCOG00000017560	ddx42	97	99.342	Xiphophorus_couchianus