EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008150 (Gene tree)
Gene ID: 102229540
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 36687 bases
Position: chr19:22451420-22488106
Accession: 102229540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025489	La	PF05383.17	8.5e-22	1	1
ENSXMAP00000008176	La	PF05383.17	8.6e-22	1	1
ENSXMAP00000040013	La	PF05383.17	8.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000040682	-	6566	-	ENSXMAP00000040013	1115 (aa)	-	-
ENSXMAT00000028754	-	6392	-	ENSXMAP00000025489	1057 (aa)	-	-
ENSXMAT00000008186	-	6491	XM_023352944	ENSXMAP00000008176	1090 (aa)	XP_023208712	M4A132

Gene Model

Click here to download ENSXMAG00000008150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008150	larp1b	86	55.228	ENSG00000138709	LARP1B	97	56.742	Homo_sapiens
ENSXMAG00000008150	larp1b	100	80.036	ENSAPOG00000020101	larp1b	100	79.946	Acanthochromis_polyacanthus
ENSXMAG00000008150	larp1b	52	53.082	ENSAMEG00000002748	LARP1B	99	53.082	Ailuropoda_melanoleuca
ENSXMAG00000008150	larp1b	100	75.933	ENSACIG00000023890	larp1b	100	81.468	Amphilophus_citrinellus
ENSXMAG00000008150	larp1b	87	80.028	ENSAOCG00000014268	larp1b	99	80.138	Amphiprion_ocellaris
ENSXMAG00000008150	larp1b	100	80.346	ENSAPEG00000004126	larp1b	100	81.961	Amphiprion_percula
ENSXMAG00000008150	larp1b	100	79.144	ENSATEG00000017849	larp1b	100	78.799	Anabas_testudineus
ENSXMAG00000008150	larp1b	83	53.231	ENSAPLG00000010129	LARP1B	100	53.797	Anas_platyrhynchos
ENSXMAG00000008150	larp1b	83	55.836	ENSACAG00000011338	LARP1B	99	53.915	Anolis_carolinensis
ENSXMAG00000008150	larp1b	62	53.717	ENSANAG00000034618	LARP1B	84	53.717	Aotus_nancymaae
ENSXMAG00000008150	larp1b	100	79.455	ENSACLG00000011948	larp1b	100	79.636	Astatotilapia_calliptera
ENSXMAG00000008150	larp1b	92	56.863	ENSAMXG00000006805	larp1b	88	61.013	Astyanax_mexicanus
ENSXMAG00000008150	larp1b	86	55.816	ENSBTAG00000012135	LARP1B	95	51.852	Bos_taurus
ENSXMAG00000008150	larp1b	82	56.583	ENSCJAG00000003338	LARP1B	99	57.486	Callithrix_jacchus
ENSXMAG00000008150	larp1b	85	57.143	ENSCAFG00000003831	LARP1B	99	58.977	Canis_familiaris
ENSXMAG00000008150	larp1b	85	56.920	ENSCAFG00020018899	LARP1B	95	58.215	Canis_lupus_dingo
ENSXMAG00000008150	larp1b	85	55.979	ENSCHIG00000023144	LARP1B	99	53.289	Capra_hircus
ENSXMAG00000008150	larp1b	82	56.391	ENSCCAG00000021948	LARP1B	97	56.498	Cebus_capucinus
ENSXMAG00000008150	larp1b	81	55.940	ENSCATG00000013541	LARP1B	97	55.806	Cercocebus_atys
ENSXMAG00000008150	larp1b	81	56.728	ENSCSAG00000003582	LARP1B	97	56.821	Chlorocebus_sabaeus
ENSXMAG00000008150	larp1b	81	52.954	ENSCHOG00000005354	LARP1B	97	52.632	Choloepus_hoffmanni
ENSXMAG00000008150	larp1b	89	55.556	ENSCPBG00000017480	LARP1B	92	55.060	Chrysemys_picta_bellii
ENSXMAG00000008150	larp1b	81	56.146	ENSCANG00000026958	LARP1B	97	56.188	Colobus_angolensis_palliatus
ENSXMAG00000008150	larp1b	100	73.274	ENSCSEG00000013519	larp1b	100	73.991	Cynoglossus_semilaevis
ENSXMAG00000008150	larp1b	100	86.053	ENSCVAG00000005046	larp1b	100	85.506	Cyprinodon_variegatus
ENSXMAG00000008150	larp1b	99	61.560	ENSDARG00000061169	larp1b	92	63.056	Danio_rerio
ENSXMAG00000008150	larp1b	50	49.734	ENSDNOG00000018765	-	98	51.859	Dasypus_novemcinctus
ENSXMAG00000008150	larp1b	68	55.786	ENSETEG00000012497	LARP1B	72	55.786	Echinops_telfairi
ENSXMAG00000008150	larp1b	84	46.368	ENSEBUG00000003668	larp1b	93	45.902	Eptatretus_burgeri
ENSXMAG00000008150	larp1b	85	56.211	ENSEASG00005018106	LARP1B	99	56.506	Equus_asinus_asinus
ENSXMAG00000008150	larp1b	90	55.644	ENSECAG00000001088	LARP1B	85	56.142	Equus_caballus
ENSXMAG00000008150	larp1b	77	61.592	ENSELUG00000023774	larp1b	99	55.379	Esox_lucius
ENSXMAG00000008150	larp1b	50	50.794	ENSFCAG00000014650	-	99	50.987	Felis_catus
ENSXMAG00000008150	larp1b	84	53.909	ENSFALG00000008098	LARP1B	96	54.341	Ficedula_albicollis
ENSXMAG00000008150	larp1b	100	87.887	ENSFHEG00000010264	larp1b	97	87.432	Fundulus_heteroclitus
ENSXMAG00000008150	larp1b	85	75.362	ENSGMOG00000005207	larp1b	86	75.725	Gadus_morhua
ENSXMAG00000008150	larp1b	90	52.469	ENSGALG00000010207	LARP1B	91	54.051	Gallus_gallus
ENSXMAG00000008150	larp1b	90	91.860	ENSGAFG00000012012	larp1b	100	96.918	Gambusia_affinis
ENSXMAG00000008150	larp1b	100	68.430	ENSGACG00000004609	larp1b	100	69.183	Gasterosteus_aculeatus
ENSXMAG00000008150	larp1b	87	56.332	ENSGAGG00000017209	LARP1B	89	56.004	Gopherus_agassizii
ENSXMAG00000008150	larp1b	81	56.634	ENSGGOG00000015900	LARP1B	97	56.498	Gorilla_gorilla
ENSXMAG00000008150	larp1b	100	79.508	ENSHBUG00000009730	larp1b	100	79.690	Haplochromis_burtoni
ENSXMAG00000008150	larp1b	66	78.814	ENSHCOG00000000918	larp1b	97	80.904	Hippocampus_comes
ENSXMAG00000008150	larp1b	92	68.474	ENSIPUG00000012138	larp1b	93	69.020	Ictalurus_punctatus
ENSXMAG00000008150	larp1b	96	81.472	ENSKMAG00000011589	larp1b	100	79.822	Kryptolebias_marmoratus
ENSXMAG00000008150	larp1b	100	77.969	ENSLBEG00000005655	larp1b	100	80.375	Labrus_bergylta
ENSXMAG00000008150	larp1b	94	57.251	ENSLACG00000015247	LARP1B	91	58.487	Latimeria_chalumnae
ENSXMAG00000008150	larp1b	86	65.074	ENSLOCG00000010684	larp1b	96	59.514	Lepisosteus_oculatus
ENSXMAG00000008150	larp1b	81	57.127	ENSMFAG00000002218	LARP1B	97	57.235	Macaca_fascicularis
ENSXMAG00000008150	larp1b	81	57.127	ENSMMUG00000021347	LARP1B	97	57.235	Macaca_mulatta
ENSXMAG00000008150	larp1b	81	52.590	ENSMNEG00000030406	LARP1B	81	62.336	Macaca_nemestrina
ENSXMAG00000008150	larp1b	81	55.844	ENSMLEG00000009306	LARP1B	97	56.360	Mandrillus_leucophaeus
ENSXMAG00000008150	larp1b	99	79.670	ENSMAMG00000000081	larp1b	99	79.121	Mastacembelus_armatus
ENSXMAG00000008150	larp1b	76	80.025	ENSMZEG00005002545	larp1b	100	82.202	Maylandia_zebra
ENSXMAG00000008150	larp1b	77	55.957	ENSMGAG00000004809	LARP1B	100	50.862	Meleagris_gallopavo
ENSXMAG00000008150	larp1b	50	38.530	ENSMICG00000028052	-	97	39.065	Microcebus_murinus
ENSXMAG00000008150	larp1b	81	59.190	ENSMICG00000036111	LARP1B	97	59.041	Microcebus_murinus
ENSXMAG00000008150	larp1b	86	56.102	ENSMODG00000012300	LARP1B	88	55.664	Monodelphis_domestica
ENSXMAG00000008150	larp1b	100	78.890	ENSMALG00000003638	larp1b	100	82.080	Monopterus_albus
ENSXMAG00000008150	larp1b	87	57.508	ENSMPUG00000017365	LARP1B	86	56.640	Mustela_putorius_furo
ENSXMAG00000008150	larp1b	83	55.848	ENSMLUG00000010229	LARP1B	99	56.059	Myotis_lucifugus
ENSXMAG00000008150	larp1b	97	73.939	ENSNBRG00000023846	larp1b	100	77.118	Neolamprologus_brichardi
ENSXMAG00000008150	larp1b	83	55.567	ENSNLEG00000013819	LARP1B	97	56.009	Nomascus_leucogenys
ENSXMAG00000008150	larp1b	63	58.226	ENSMEUG00000010308	LARP1B	74	60.000	Notamacropus_eugenii
ENSXMAG00000008150	larp1b	76	51.445	ENSOPRG00000005478	LARP1B	89	52.814	Ochotona_princeps
ENSXMAG00000008150	larp1b	87	79.472	ENSONIG00000012386	larp1b	100	78.659	Oreochromis_niloticus
ENSXMAG00000008150	larp1b	85	54.953	ENSOCUG00000013330	LARP1B	96	56.243	Oryctolagus_cuniculus
ENSXMAG00000008150	larp1b	97	75.257	ENSORLG00000017954	larp1b	100	77.361	Oryzias_latipes
ENSXMAG00000008150	larp1b	98	75.346	ENSORLG00020013081	larp1b	100	74.659	Oryzias_latipes_hni
ENSXMAG00000008150	larp1b	100	75.091	ENSORLG00015009580	larp1b	100	77.966	Oryzias_latipes_hsok
ENSXMAG00000008150	larp1b	97	78.558	ENSOMEG00000004210	larp1b	100	77.119	Oryzias_melastigma
ENSXMAG00000008150	larp1b	82	58.534	ENSOGAG00000005771	LARP1B	100	57.987	Otolemur_garnettii
ENSXMAG00000008150	larp1b	81	57.174	ENSOARG00000015300	LARP1B	97	56.526	Ovis_aries
ENSXMAG00000008150	larp1b	81	56.742	ENSPPAG00000030439	LARP1B	97	56.606	Pan_paniscus
ENSXMAG00000008150	larp1b	50	50.794	ENSPPRG00000002743	-	97	52.222	Panthera_pardus
ENSXMAG00000008150	larp1b	50	50.794	ENSPTIG00000011225	LARP1B	97	52.222	Panthera_tigris_altaica
ENSXMAG00000008150	larp1b	81	56.742	ENSPTRG00000016437	LARP1B	97	56.606	Pan_troglodytes
ENSXMAG00000008150	larp1b	81	57.127	ENSPANG00000012488	LARP1B	97	56.989	Papio_anubis
ENSXMAG00000008150	larp1b	88	53.741	ENSPKIG00000014360	larp1b	97	53.741	Paramormyrops_kingsleyae
ENSXMAG00000008150	larp1b	86	57.350	ENSPSIG00000012885	LARP1B	99	56.392	Pelodiscus_sinensis
ENSXMAG00000008150	larp1b	78	71.152	ENSPMGG00000007207	larp1b	94	71.956	Periophthalmus_magnuspinnatus
ENSXMAG00000008150	larp1b	65	55.191	ENSPMAG00000002700	larp1b	99	50.402	Petromyzon_marinus
ENSXMAG00000008150	larp1b	72	69.737	ENSPCIG00000026516	LARP1B	94	64.763	Phascolarctos_cinereus
ENSXMAG00000008150	larp1b	63	96.361	ENSPFOG00000022837	-	99	96.361	Poecilia_formosa
ENSXMAG00000008150	larp1b	100	96.323	ENSPFOG00000019519	larp1b	100	96.323	Poecilia_formosa
ENSXMAG00000008150	larp1b	100	96.055	ENSPLAG00000007115	larp1b	100	96.055	Poecilia_latipinna
ENSXMAG00000008150	larp1b	100	95.967	ENSPMEG00000001224	larp1b	100	95.967	Poecilia_mexicana
ENSXMAG00000008150	larp1b	84	54.517	ENSPCAG00000007546	LARP1B	97	55.471	Procavia_capensis
ENSXMAG00000008150	larp1b	71	68.908	ENSPCOG00000021874	LARP1B	96	68.908	Propithecus_coquereli
ENSXMAG00000008150	larp1b	84	53.312	ENSPVAG00000005373	LARP1B	97	53.905	Pteropus_vampyrus
ENSXMAG00000008150	larp1b	76	79.243	ENSPNYG00000017357	larp1b	100	81.738	Pundamilia_nyererei
ENSXMAG00000008150	larp1b	92	65.617	ENSPNAG00000008823	larp1b	91	62.339	Pygocentrus_nattereri
ENSXMAG00000008150	larp1b	50	49.381	ENSRBIG00000039982	-	97	50.926	Rhinopithecus_bieti
ENSXMAG00000008150	larp1b	81	57.127	ENSRROG00000030771	LARP1B	97	57.019	Rhinopithecus_roxellana
ENSXMAG00000008150	larp1b	61	53.541	ENSSHAG00000014474	LARP1B	99	53.419	Sarcophilus_harrisii
ENSXMAG00000008150	larp1b	84	81.373	ENSSMAG00000006347	larp1b	94	81.317	Scophthalmus_maximus
ENSXMAG00000008150	larp1b	100	79.855	ENSSDUG00000004182	larp1b	100	79.764	Seriola_dumerili
ENSXMAG00000008150	larp1b	98	73.166	ENSSLDG00000014613	larp1b	99	78.483	Seriola_lalandi_dorsalis
ENSXMAG00000008150	larp1b	80	56.636	ENSSPUG00000011837	LARP1B	94	56.089	Sphenodon_punctatus
ENSXMAG00000008150	larp1b	100	81.408	ENSSPAG00000017772	larp1b	100	81.408	Stegastes_partitus
ENSXMAG00000008150	larp1b	87	54.108	ENSSSCG00000034280	LARP1B	98	80.460	Sus_scrofa
ENSXMAG00000008150	larp1b	70	58.322	ENSTGUG00000002098	-	84	62.166	Taeniopygia_guttata
ENSXMAG00000008150	larp1b	99	73.646	ENSTRUG00000005612	larp1b	96	78.408	Takifugu_rubripes
ENSXMAG00000008150	larp1b	86	77.864	ENSTNIG00000012398	larp1b	93	82.866	Tetraodon_nigroviridis
ENSXMAG00000008150	larp1b	58	60.328	ENSTBEG00000004177	LARP1B	66	61.053	Tupaia_belangeri
ENSXMAG00000008150	larp1b	73	57.775	ENSTTRG00000012984	LARP1B	89	57.775	Tursiops_truncatus
ENSXMAG00000008150	larp1b	85	57.039	ENSUMAG00000007373	LARP1B	96	58.370	Ursus_maritimus
ENSXMAG00000008150	larp1b	82	48.046	ENSVPAG00000007223	LARP1B	91	72.024	Vicugna_pacos
ENSXMAG00000008150	larp1b	85	57.218	ENSVVUG00000011307	LARP1B	99	57.412	Vulpes_vulpes
ENSXMAG00000008150	larp1b	88	53.007	ENSXETG00000022512	larp1b	93	52.917	Xenopus_tropicalis
ENSXMAG00000008150	larp1b	89	98.400	ENSXCOG00000004435	larp1b	97	96.850	Xiphophorus_couchianus