EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008169 (Gene tree)
Gene ID: 102236730
Gene Symbol: rnf113a
Alias: wu:fj91a07|zgc:110007|znf183
Full Name: ring finger protein 113A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 3629 bases
Position: chr16:4690790-4694418
Accession: 102236730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008201	zf-CCCH	PF00642.24	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008211	-	2474	XM_005796656	ENSXMAP00000008201	322 (aa)	XP_005796713	M4A157

Gene Model

Click here to download ENSXMAG00000008169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008169	rnf113a	93	57.426	ENSG00000139797	RNF113B	93	57.426	Homo_sapiens
ENSXMAG00000008169	rnf113a	97	69.753	ENSG00000125352	RNF113A	94	70.462	Homo_sapiens
ENSXMAG00000008169	rnf113a	100	89.783	ENSAPOG00000017510	rnf113a	100	89.783	Acanthochromis_polyacanthus
ENSXMAG00000008169	rnf113a	93	70.794	ENSAMEG00000019845	-	90	71.746	Ailuropoda_melanoleuca
ENSXMAG00000008169	rnf113a	100	74.303	ENSACIG00000007458	rnf113a	100	74.613	Amphilophus_citrinellus
ENSXMAG00000008169	rnf113a	100	89.164	ENSAOCG00000003485	rnf113a	100	89.164	Amphiprion_ocellaris
ENSXMAG00000008169	rnf113a	100	89.164	ENSAPEG00000001084	rnf113a	100	89.164	Amphiprion_percula
ENSXMAG00000008169	rnf113a	100	90.062	ENSATEG00000022950	rnf113a	100	90.062	Anabas_testudineus
ENSXMAG00000008169	rnf113a	79	81.569	ENSAPLG00000012510	-	96	80.385	Anas_platyrhynchos
ENSXMAG00000008169	rnf113a	93	76.568	ENSACAG00000012485	-	96	76.568	Anolis_carolinensis
ENSXMAG00000008169	rnf113a	95	70.126	ENSANAG00000024332	-	91	72.039	Aotus_nancymaae
ENSXMAG00000008169	rnf113a	97	69.470	ENSANAG00000013925	-	94	69.470	Aotus_nancymaae
ENSXMAG00000008169	rnf113a	93	58.746	ENSANAG00000020431	RNF113B	93	58.746	Aotus_nancymaae
ENSXMAG00000008169	rnf113a	100	84.520	ENSACLG00000025256	rnf113a	100	84.830	Astatotilapia_calliptera
ENSXMAG00000008169	rnf113a	100	84.520	ENSAMXG00000011273	rnf113a	100	84.520	Astyanax_mexicanus
ENSXMAG00000008169	rnf113a	93	64.984	ENSBTAG00000008684	-	90	65.931	Bos_taurus
ENSXMAG00000008169	rnf113a	93	72.168	ENSBTAG00000006034	RNF113A	90	73.226	Bos_taurus
ENSXMAG00000008169	rnf113a	91	47.682	WBGene00010476	rnf-113	77	48.845	Caenorhabditis_elegans
ENSXMAG00000008169	rnf113a	97	68.519	ENSCJAG00000022327	RNF113A	94	68.827	Callithrix_jacchus
ENSXMAG00000008169	rnf113a	93	60.396	ENSCJAG00000004501	RNF113B	93	60.726	Callithrix_jacchus
ENSXMAG00000008169	rnf113a	93	68.966	ENSCAFG00000018430	-	90	71.746	Canis_familiaris
ENSXMAG00000008169	rnf113a	93	60.883	ENSCAFG00000018373	-	90	62.145	Canis_familiaris
ENSXMAG00000008169	rnf113a	83	65.108	ENSCAFG00020020280	-	90	62.658	Canis_lupus_dingo
ENSXMAG00000008169	rnf113a	93	68.966	ENSCAFG00020004044	-	90	71.746	Canis_lupus_dingo
ENSXMAG00000008169	rnf113a	97	70.062	ENSCHIG00000018820	-	94	71.077	Capra_hircus
ENSXMAG00000008169	rnf113a	93	67.752	ENSCHIG00000015616	-	90	67.752	Capra_hircus
ENSXMAG00000008169	rnf113a	97	68.308	ENSTSYG00000001308	RNF113A	94	70.859	Carlito_syrichta
ENSXMAG00000008169	rnf113a	97	70.440	ENSCPOG00000038517	-	95	70.440	Cavia_porcellus
ENSXMAG00000008169	rnf113a	93	60.396	ENSCCAG00000021327	RNF113B	92	61.000	Cebus_capucinus
ENSXMAG00000008169	rnf113a	97	69.444	ENSCCAG00000013617	RNF113A	94	69.753	Cebus_capucinus
ENSXMAG00000008169	rnf113a	97	70.769	ENSCATG00000002702	RNF113A	94	70.769	Cercocebus_atys
ENSXMAG00000008169	rnf113a	93	70.927	ENSCLAG00000017479	-	90	71.885	Chinchilla_lanigera
ENSXMAG00000008169	rnf113a	97	60.127	ENSCSAG00000019472	-	94	60.938	Chlorocebus_sabaeus
ENSXMAG00000008169	rnf113a	93	58.746	ENSCSAG00000000222	RNF113B	89	59.211	Chlorocebus_sabaeus
ENSXMAG00000008169	rnf113a	76	68.254	ENSCHOG00000008711	-	95	69.444	Choloepus_hoffmanni
ENSXMAG00000008169	rnf113a	100	73.926	ENSCPBG00000026980	-	99	73.926	Chrysemys_picta_bellii
ENSXMAG00000008169	rnf113a	90	67.667	ENSCING00000009197	-	92	68.439	Ciona_intestinalis
ENSXMAG00000008169	rnf113a	81	71.591	ENSCSAVG00000006210	-	90	69.492	Ciona_savignyi
ENSXMAG00000008169	rnf113a	97	70.988	ENSCANG00000037715	RNF113A	94	70.988	Colobus_angolensis_palliatus
ENSXMAG00000008169	rnf113a	93	57.333	ENSCANG00000041552	RNF113B	94	58.224	Colobus_angolensis_palliatus
ENSXMAG00000008169	rnf113a	93	71.290	ENSCGRG00001002251	Rnf113a1	90	71.290	Cricetulus_griseus_chok1gshd
ENSXMAG00000008169	rnf113a	93	70.968	ENSCGRG00000019441	Rnf113a1	90	70.968	Cricetulus_griseus_crigri
ENSXMAG00000008169	rnf113a	97	69.350	ENSCGRG00000016675	Rnf113a2	96	69.969	Cricetulus_griseus_crigri
ENSXMAG00000008169	rnf113a	100	89.130	ENSCSEG00000021570	rnf113a	86	89.130	Cynoglossus_semilaevis
ENSXMAG00000008169	rnf113a	100	89.752	ENSCVAG00000011305	rnf113a	100	89.752	Cyprinodon_variegatus
ENSXMAG00000008169	rnf113a	100	85.449	ENSDARG00000037930	rnf113a	100	85.449	Danio_rerio
ENSXMAG00000008169	rnf113a	93	70.323	ENSDORG00000027624	Rnf113a2	92	71.704	Dipodomys_ordii
ENSXMAG00000008169	rnf113a	94	58.491	FBgn0038772	mdlc	93	56.845	Drosophila_melanogaster
ENSXMAG00000008169	rnf113a	97	71.384	ENSETEG00000018346	-	93	71.562	Echinops_telfairi
ENSXMAG00000008169	rnf113a	95	73.941	ENSEBUG00000016079	rnf113a	94	73.941	Eptatretus_burgeri
ENSXMAG00000008169	rnf113a	93	68.489	ENSEASG00005010538	-	90	69.132	Equus_asinus_asinus
ENSXMAG00000008169	rnf113a	93	72.581	ENSECAG00000003934	-	90	72.903	Equus_caballus
ENSXMAG00000008169	rnf113a	92	69.381	ENSECAG00000004638	-	96	69.707	Equus_caballus
ENSXMAG00000008169	rnf113a	100	82.972	ENSELUG00000020657	rnf113a	100	82.972	Esox_lucius
ENSXMAG00000008169	rnf113a	93	69.304	ENSFCAG00000028962	-	90	69.304	Felis_catus
ENSXMAG00000008169	rnf113a	93	71.845	ENSFCAG00000025700	-	90	72.168	Felis_catus
ENSXMAG00000008169	rnf113a	93	71.521	ENSFCAG00000024392	-	87	71.845	Felis_catus
ENSXMAG00000008169	rnf113a	84	78.545	ENSFALG00000004633	-	95	75.517	Ficedula_albicollis
ENSXMAG00000008169	rnf113a	100	92.857	ENSFHEG00000023305	rnf113a	100	92.857	Fundulus_heteroclitus
ENSXMAG00000008169	rnf113a	99	81.269	ENSGMOG00000004541	rnf113a	99	81.269	Gadus_morhua
ENSXMAG00000008169	rnf113a	97	72.698	ENSGALG00000000538	RNF113A	96	72.785	Gallus_gallus
ENSXMAG00000008169	rnf113a	100	98.758	ENSGAFG00000011863	rnf113a	99	98.758	Gambusia_affinis
ENSXMAG00000008169	rnf113a	99	87.156	ENSGACG00000009738	rnf113a	99	87.156	Gasterosteus_aculeatus
ENSXMAG00000008169	rnf113a	100	73.700	ENSGAGG00000020490	-	99	73.700	Gopherus_agassizii
ENSXMAG00000008169	rnf113a	97	69.753	ENSGGOG00000002324	RNF113A	94	70.462	Gorilla_gorilla
ENSXMAG00000008169	rnf113a	93	57.756	ENSGGOG00000023052	RNF113B	93	57.756	Gorilla_gorilla
ENSXMAG00000008169	rnf113a	100	84.830	ENSHBUG00000008626	rnf113a	100	85.139	Haplochromis_burtoni
ENSXMAG00000008169	rnf113a	96	70.497	ENSHGLG00000019571	-	94	71.429	Heterocephalus_glaber_female
ENSXMAG00000008169	rnf113a	96	70.122	ENSHGLG00100019582	-	93	71.207	Heterocephalus_glaber_male
ENSXMAG00000008169	rnf113a	100	84.211	ENSHCOG00000003421	rnf113a	100	84.211	Hippocampus_comes
ENSXMAG00000008169	rnf113a	100	86.068	ENSIPUG00000013431	RNF113A	100	86.068	Ictalurus_punctatus
ENSXMAG00000008169	rnf113a	93	71.383	ENSSTOG00000019866	-	90	72.115	Ictidomys_tridecemlineatus
ENSXMAG00000008169	rnf113a	64	62.319	ENSJJAG00000019849	Rnf113a1	91	55.078	Jaculus_jaculus
ENSXMAG00000008169	rnf113a	100	90.994	ENSKMAG00000009830	rnf113a	100	90.994	Kryptolebias_marmoratus
ENSXMAG00000008169	rnf113a	100	89.783	ENSLBEG00000004627	rnf113a	100	89.783	Labrus_bergylta
ENSXMAG00000008169	rnf113a	99	78.019	ENSLACG00000013178	rnf113a	99	78.019	Latimeria_chalumnae
ENSXMAG00000008169	rnf113a	100	79.567	ENSLOCG00000011785	rnf113a	100	79.567	Lepisosteus_oculatus
ENSXMAG00000008169	rnf113a	97	69.040	ENSLAFG00000013906	-	94	69.040	Loxodonta_africana
ENSXMAG00000008169	rnf113a	97	70.769	ENSMFAG00000018472	RNF113A	94	70.769	Macaca_fascicularis
ENSXMAG00000008169	rnf113a	97	70.769	ENSMMUG00000020223	RNF113A	94	70.769	Macaca_mulatta
ENSXMAG00000008169	rnf113a	97	70.769	ENSMNEG00000019778	RNF113A	94	70.769	Macaca_nemestrina
ENSXMAG00000008169	rnf113a	81	61.509	ENSMLEG00000038757	RNF113B	89	61.509	Mandrillus_leucophaeus
ENSXMAG00000008169	rnf113a	97	70.769	ENSMLEG00000020750	RNF113A	94	70.769	Mandrillus_leucophaeus
ENSXMAG00000008169	rnf113a	100	89.164	ENSMAMG00000021895	rnf113a	100	89.164	Mastacembelus_armatus
ENSXMAG00000008169	rnf113a	100	84.520	ENSMZEG00005023086	rnf113a	100	84.830	Maylandia_zebra
ENSXMAG00000008169	rnf113a	89	76.817	ENSMGAG00000001753	-	98	76.817	Meleagris_gallopavo
ENSXMAG00000008169	rnf113a	96	68.025	ENSMICG00000038084	-	93	68.847	Microcebus_murinus
ENSXMAG00000008169	rnf113a	93	69.775	ENSMICG00000001750	-	90	71.061	Microcebus_murinus
ENSXMAG00000008169	rnf113a	93	71.613	ENSMOCG00000005370	-	88	72.347	Microtus_ochrogaster
ENSXMAG00000008169	rnf113a	99	87.267	ENSMMOG00000016954	rnf113a	100	87.267	Mola_mola
ENSXMAG00000008169	rnf113a	100	82.663	ENSMALG00000007938	rnf113a	100	82.663	Monopterus_albus
ENSXMAG00000008169	rnf113a	93	71.521	MGP_CAROLIEiJ_G0017943	Rnf113a2	92	71.845	Mus_caroli
ENSXMAG00000008169	rnf113a	93	71.290	MGP_PahariEiJ_G0031547	Rnf113a1	90	72.347	Mus_pahari
ENSXMAG00000008169	rnf113a	93	71.521	MGP_PahariEiJ_G0029702	Rnf113a2	92	71.845	Mus_pahari
ENSXMAG00000008169	rnf113a	93	71.935	MGP_SPRETEiJ_G0034156	Rnf113a1	90	72.258	Mus_spretus
ENSXMAG00000008169	rnf113a	93	71.521	MGP_SPRETEiJ_G0018788	Rnf113a2	92	71.845	Mus_spretus
ENSXMAG00000008169	rnf113a	97	67.470	ENSMPUG00000019358	-	94	70.031	Mustela_putorius_furo
ENSXMAG00000008169	rnf113a	94	70.662	ENSMLUG00000016812	-	91	71.293	Myotis_lucifugus
ENSXMAG00000008169	rnf113a	98	68.712	ENSMLUG00000010856	-	95	69.018	Myotis_lucifugus
ENSXMAG00000008169	rnf113a	100	85.139	ENSNBRG00000004314	rnf113a	100	85.449	Neolamprologus_brichardi
ENSXMAG00000008169	rnf113a	93	57.756	ENSNLEG00000007844	RNF113B	93	58.224	Nomascus_leucogenys
ENSXMAG00000008169	rnf113a	97	70.370	ENSNLEG00000018333	RNF113A	94	70.370	Nomascus_leucogenys
ENSXMAG00000008169	rnf113a	95	69.876	ENSMEUG00000001855	-	96	70.898	Notamacropus_eugenii
ENSXMAG00000008169	rnf113a	100	84.520	ENSONIG00000000741	rnf113a	100	84.830	Oreochromis_niloticus
ENSXMAG00000008169	rnf113a	95	71.845	ENSOANG00000002592	-	92	71.845	Ornithorhynchus_anatinus
ENSXMAG00000008169	rnf113a	94	71.246	ENSOCUG00000016207	-	91	71.246	Oryctolagus_cuniculus
ENSXMAG00000008169	rnf113a	99	86.604	ENSORLG00000002442	rnf113a	100	86.604	Oryzias_latipes
ENSXMAG00000008169	rnf113a	99	86.293	ENSORLG00020011512	rnf113a	100	86.293	Oryzias_latipes_hni
ENSXMAG00000008169	rnf113a	99	86.604	ENSORLG00015004382	rnf113a	100	86.604	Oryzias_latipes_hsok
ENSXMAG00000008169	rnf113a	99	87.850	ENSOMEG00000020197	rnf113a	100	87.850	Oryzias_melastigma
ENSXMAG00000008169	rnf113a	94	70.418	ENSOGAG00000011638	RNF113B	91	70.418	Otolemur_garnettii
ENSXMAG00000008169	rnf113a	94	71.246	ENSOGAG00000031602	RNF113A	91	72.204	Otolemur_garnettii
ENSXMAG00000008169	rnf113a	93	65.176	ENSOARG00000015294	-	90	65.495	Ovis_aries
ENSXMAG00000008169	rnf113a	97	70.062	ENSOARG00000009771	-	94	71.077	Ovis_aries
ENSXMAG00000008169	rnf113a	93	58.086	ENSPPAG00000040641	RNF113B	93	58.086	Pan_paniscus
ENSXMAG00000008169	rnf113a	97	70.154	ENSPPAG00000009537	RNF113A	94	70.154	Pan_paniscus
ENSXMAG00000008169	rnf113a	93	69.206	ENSPPRG00000020640	-	90	70.323	Panthera_pardus
ENSXMAG00000008169	rnf113a	93	71.845	ENSPPRG00000011512	-	90	72.168	Panthera_pardus
ENSXMAG00000008169	rnf113a	93	71.845	ENSPTIG00000007986	-	90	72.168	Panthera_tigris_altaica
ENSXMAG00000008169	rnf113a	97	70.154	ENSPTRG00000022231	RNF113A	94	70.154	Pan_troglodytes
ENSXMAG00000008169	rnf113a	93	58.086	ENSPTRG00000005987	RNF113B	93	58.086	Pan_troglodytes
ENSXMAG00000008169	rnf113a	97	70.769	ENSPANG00000011522	RNF113A	94	70.769	Papio_anubis
ENSXMAG00000008169	rnf113a	100	84.161	ENSPKIG00000016796	rnf113a	100	84.161	Paramormyrops_kingsleyae
ENSXMAG00000008169	rnf113a	89	79.239	ENSPSIG00000012676	-	98	79.239	Pelodiscus_sinensis
ENSXMAG00000008169	rnf113a	100	85.139	ENSPMGG00000009668	rnf113a	100	85.139	Periophthalmus_magnuspinnatus
ENSXMAG00000008169	rnf113a	93	71.704	ENSPEMG00000002490	Rnf113a1	90	72.436	Peromyscus_maniculatus_bairdii
ENSXMAG00000008169	rnf113a	84	78.519	ENSPMAG00000005184	rnf113a	92	78.519	Petromyzon_marinus
ENSXMAG00000008169	rnf113a	95	70.370	ENSPCIG00000028916	-	92	70.679	Phascolarctos_cinereus
ENSXMAG00000008169	rnf113a	100	97.826	ENSPFOG00000014248	rnf113a	100	97.826	Poecilia_formosa
ENSXMAG00000008169	rnf113a	100	97.516	ENSPLAG00000010435	rnf113a	100	97.516	Poecilia_latipinna
ENSXMAG00000008169	rnf113a	100	98.137	ENSPMEG00000010641	rnf113a	100	98.137	Poecilia_mexicana
ENSXMAG00000008169	rnf113a	100	99.068	ENSPREG00000009900	rnf113a	99	99.068	Poecilia_reticulata
ENSXMAG00000008169	rnf113a	97	68.827	ENSPPYG00000020676	RNF113A	94	70.154	Pongo_abelii
ENSXMAG00000008169	rnf113a	93	59.076	ENSPPYG00000005460	RNF113B	94	59.406	Pongo_abelii
ENSXMAG00000008169	rnf113a	97	68.012	ENSPCAG00000014633	-	94	69.136	Procavia_capensis
ENSXMAG00000008169	rnf113a	93	68.167	ENSPCOG00000005671	-	89	68.810	Propithecus_coquereli
ENSXMAG00000008169	rnf113a	100	84.520	ENSPNYG00000013863	rnf113a	100	84.830	Pundamilia_nyererei
ENSXMAG00000008169	rnf113a	100	85.139	ENSPNAG00000017428	rnf113a	100	85.139	Pygocentrus_nattereri
ENSXMAG00000008169	rnf113a	93	72.258	ENSRNOG00000034040	LOC108348079	90	72.258	Rattus_norvegicus
ENSXMAG00000008169	rnf113a	93	72.258	ENSRNOG00000059412	Rnf113a1	90	72.258	Rattus_norvegicus
ENSXMAG00000008169	rnf113a	93	56.667	ENSRBIG00000036094	RNF113B	93	58.416	Rhinopithecus_bieti
ENSXMAG00000008169	rnf113a	97	70.988	ENSRBIG00000017389	RNF113A	94	70.988	Rhinopithecus_bieti
ENSXMAG00000008169	rnf113a	93	56.667	ENSRROG00000045661	RNF113B	93	58.416	Rhinopithecus_roxellana
ENSXMAG00000008169	rnf113a	97	70.988	ENSRROG00000012149	RNF113A	94	70.988	Rhinopithecus_roxellana
ENSXMAG00000008169	rnf113a	97	69.136	ENSSBOG00000017704	RNF113A	94	69.444	Saimiri_boliviensis_boliviensis
ENSXMAG00000008169	rnf113a	93	58.472	ENSSBOG00000029719	RNF113B	93	60.197	Saimiri_boliviensis_boliviensis
ENSXMAG00000008169	rnf113a	96	69.419	ENSSHAG00000008839	-	93	69.725	Sarcophilus_harrisii
ENSXMAG00000008169	rnf113a	100	80.124	ENSSFOG00015016567	rnf113a	99	80.124	Scleropages_formosus
ENSXMAG00000008169	rnf113a	100	86.997	ENSSMAG00000009235	rnf113a	100	86.997	Scophthalmus_maximus
ENSXMAG00000008169	rnf113a	100	89.474	ENSSDUG00000022244	rnf113a	100	89.474	Seriola_dumerili
ENSXMAG00000008169	rnf113a	100	89.474	ENSSLDG00000018582	rnf113a	100	89.474	Seriola_lalandi_dorsalis
ENSXMAG00000008169	rnf113a	97	70.000	ENSSARG00000010436	-	93	70.625	Sorex_araneus
ENSXMAG00000008169	rnf113a	96	75.556	ENSSPUG00000018786	-	86	75.556	Sphenodon_punctatus
ENSXMAG00000008169	rnf113a	100	89.474	ENSSPAG00000013187	rnf113a	100	89.474	Stegastes_partitus
ENSXMAG00000008169	rnf113a	93	68.710	ENSSSCG00000032973	-	90	69.677	Sus_scrofa
ENSXMAG00000008169	rnf113a	100	71.166	ENSTGUG00000001947	-	99	71.166	Taeniopygia_guttata
ENSXMAG00000008169	rnf113a	100	83.851	ENSTRUG00000011142	rnf113a	100	83.851	Takifugu_rubripes
ENSXMAG00000008169	rnf113a	100	85.449	ENSTNIG00000014938	rnf113a	100	85.449	Tetraodon_nigroviridis
ENSXMAG00000008169	rnf113a	97	69.753	ENSTBEG00000012687	-	94	70.679	Tupaia_belangeri
ENSXMAG00000008169	rnf113a	95	70.476	ENSUAMG00000024564	-	92	71.519	Ursus_americanus
ENSXMAG00000008169	rnf113a	93	71.290	ENSUMAG00000002167	-	93	72.347	Ursus_maritimus
ENSXMAG00000008169	rnf113a	87	71.678	ENSVPAG00000004521	-	91	71.678	Vicugna_pacos
ENSXMAG00000008169	rnf113a	57	64.550	ENSVVUG00000004522	-	78	58.190	Vulpes_vulpes
ENSXMAG00000008169	rnf113a	93	68.966	ENSVVUG00000011662	-	90	71.746	Vulpes_vulpes
ENSXMAG00000008169	rnf113a	98	76.489	ENSXETG00000002042	rnf113a	99	77.116	Xenopus_tropicalis
ENSXMAG00000008169	rnf113a	95	97.720	ENSXCOG00000017542	rnf113a	98	97.720	Xiphophorus_couchianus