EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008280 (Gene tree)
Gene ID: 102221660
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 12784 bases
Position: chr18:10220162-10232945
Accession: 102221660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008319	B3_4	PF03483.17	1.5e-26	1	1
ENSXMAP00000019501	B3_4	PF03483.17	4.7e-26	1	1
ENSXMAP00000008319	B5	PF03484.15	1.7e-15	1	1
ENSXMAP00000019501	B5	PF03484.15	6.2e-15	1	1
ENSXMAP00000019501	EF1_GNE	PF00736.19	1.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008330	-	1530	-	ENSXMAP00000008319	509 (aa)	-	M4A1H5
ENSXMAT00000019529	-	2639	XM_005805877	ENSXMAP00000019501	847 (aa)	XP_005805934	M4AYF6

Gene Model

Click here to download ENSXMAG00000008280's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008280	farsb	100	67.742	ENSG00000116120	FARSB	100	75.593	Homo_sapiens
ENSXMAG00000008280	farsb	100	87.382	ENSAPOG00000013072	farsb	100	87.382	Acanthochromis_polyacanthus
ENSXMAG00000008280	farsb	100	67.742	ENSAMEG00000005984	FARSB	100	75.593	Ailuropoda_melanoleuca
ENSXMAG00000008280	farsb	100	74.024	ENSACIG00000021623	farsb	100	86.248	Amphilophus_citrinellus
ENSXMAG00000008280	farsb	100	87.028	ENSAOCG00000004912	farsb	100	87.028	Amphiprion_ocellaris
ENSXMAG00000008280	farsb	100	86.910	ENSAPEG00000001153	farsb	100	86.910	Amphiprion_percula
ENSXMAG00000008280	farsb	100	86.895	ENSATEG00000021441	farsb	100	86.895	Anabas_testudineus
ENSXMAG00000008280	farsb	98	67.069	ENSAPLG00000010292	FARSB	98	75.345	Anas_platyrhynchos
ENSXMAG00000008280	farsb	100	66.723	ENSACAG00000004769	FARSB	98	75.212	Anolis_carolinensis
ENSXMAG00000008280	farsb	100	67.063	ENSANAG00000024637	FARSB	100	74.915	Aotus_nancymaae
ENSXMAG00000008280	farsb	100	86.321	ENSACLG00000013951	farsb	100	87.279	Astatotilapia_calliptera
ENSXMAG00000008280	farsb	96	64.074	ENSAMXG00000033881	farsb	100	81.563	Astyanax_mexicanus
ENSXMAG00000008280	farsb	95	66.489	ENSBTAG00000045523	-	100	74.513	Bos_taurus
ENSXMAG00000008280	farsb	100	67.742	ENSBTAG00000011649	FARSB	100	75.593	Bos_taurus
ENSXMAG00000008280	farsb	100	52.196	WBGene00001498	fars-3	100	57.939	Caenorhabditis_elegans
ENSXMAG00000008280	farsb	100	67.572	ENSCJAG00000012181	FARSB	100	75.424	Callithrix_jacchus
ENSXMAG00000008280	farsb	100	67.912	ENSCAFG00000016094	-	100	75.932	Canis_familiaris
ENSXMAG00000008280	farsb	95	73.777	ENSCAFG00020026684	FARSB	100	75.532	Canis_lupus_dingo
ENSXMAG00000008280	farsb	100	68.081	ENSCHIG00000014275	FARSB	100	75.932	Capra_hircus
ENSXMAG00000008280	farsb	100	67.233	ENSTSYG00000008461	FARSB	100	74.915	Carlito_syrichta
ENSXMAG00000008280	farsb	95	60.279	ENSCAPG00000016436	FARSB	99	68.870	Cavia_aperea
ENSXMAG00000008280	farsb	100	66.893	ENSCPOG00000013109	FARSB	100	75.254	Cavia_porcellus
ENSXMAG00000008280	farsb	100	63.158	ENSCCAG00000025840	FARSB	100	70.847	Cebus_capucinus
ENSXMAG00000008280	farsb	100	67.572	ENSCATG00000036168	FARSB	100	75.424	Cercocebus_atys
ENSXMAG00000008280	farsb	100	67.912	ENSCLAG00000011954	FARSB	100	76.271	Chinchilla_lanigera
ENSXMAG00000008280	farsb	100	67.572	ENSCSAG00000007806	FARSB	100	75.424	Chlorocebus_sabaeus
ENSXMAG00000008280	farsb	83	84.884	ENSCHOG00000011785	FARSB	81	86.364	Choloepus_hoffmanni
ENSXMAG00000008280	farsb	100	67.572	ENSCPBG00000019346	FARSB	98	76.401	Chrysemys_picta_bellii
ENSXMAG00000008280	farsb	99	52.843	ENSCING00000004180	-	99	60.870	Ciona_intestinalis
ENSXMAG00000008280	farsb	91	59.514	ENSCSAVG00000005346	-	99	61.706	Ciona_savignyi
ENSXMAG00000008280	farsb	96	66.960	ENSCANG00000036239	FARSB	100	75.088	Colobus_angolensis_palliatus
ENSXMAG00000008280	farsb	100	68.421	ENSCGRG00001022928	Farsb	100	76.271	Cricetulus_griseus_chok1gshd
ENSXMAG00000008280	farsb	100	68.421	ENSCGRG00000001513	Farsb	100	76.271	Cricetulus_griseus_crigri
ENSXMAG00000008280	farsb	100	76.740	ENSCSEG00000005415	farsb	100	87.299	Cynoglossus_semilaevis
ENSXMAG00000008280	farsb	83	82.000	ENSCVAG00000018815	farsb	98	88.444	Cyprinodon_variegatus
ENSXMAG00000008280	farsb	100	72.542	ENSDARG00000016864	farsb	100	83.220	Danio_rerio
ENSXMAG00000008280	farsb	100	66.723	ENSDNOG00000002511	FARSB	100	74.746	Dasypus_novemcinctus
ENSXMAG00000008280	farsb	100	67.402	ENSDORG00000011102	Farsb	100	75.085	Dipodomys_ordii
ENSXMAG00000008280	farsb	100	55.161	FBgn0039175	beta-PheRS	100	63.069	Drosophila_melanogaster
ENSXMAG00000008280	farsb	96	65.026	ENSETEG00000015080	FARSB	100	73.333	Echinops_telfairi
ENSXMAG00000008280	farsb	100	59.831	ENSEBUG00000006846	farsb	100	66.780	Eptatretus_burgeri
ENSXMAG00000008280	farsb	100	67.742	ENSEASG00005011297	FARSB	100	75.763	Equus_asinus_asinus
ENSXMAG00000008280	farsb	100	65.410	ENSECAG00000023086	FARSB	99	75.780	Equus_caballus
ENSXMAG00000008280	farsb	100	58.234	ENSEEUG00000007441	FARSB	91	72.340	Erinaceus_europaeus
ENSXMAG00000008280	farsb	94	75.686	ENSELUG00000014767	farsb	99	84.413	Esox_lucius
ENSXMAG00000008280	farsb	100	68.081	ENSFCAG00000026772	FARSB	100	76.102	Felis_catus
ENSXMAG00000008280	farsb	96	66.432	ENSFALG00000006739	FARSB	96	74.868	Ficedula_albicollis
ENSXMAG00000008280	farsb	100	67.742	ENSFDAG00000008871	FARSB	100	75.763	Fukomys_damarensis
ENSXMAG00000008280	farsb	100	91.027	ENSFHEG00000020939	farsb	98	93.889	Fundulus_heteroclitus
ENSXMAG00000008280	farsb	93	78.218	ENSGMOG00000013047	farsb	99	84.045	Gadus_morhua
ENSXMAG00000008280	farsb	100	67.572	ENSGALG00000005236	FARSB	100	75.722	Gallus_gallus
ENSXMAG00000008280	farsb	100	95.986	ENSGAFG00000020900	farsb	100	95.986	Gambusia_affinis
ENSXMAG00000008280	farsb	90	82.822	ENSGACG00000000261	farsb	99	87.570	Gasterosteus_aculeatus
ENSXMAG00000008280	farsb	100	67.742	ENSGAGG00000016575	FARSB	98	76.740	Gopherus_agassizii
ENSXMAG00000008280	farsb	100	86.439	ENSHBUG00000022379	farsb	100	87.267	Haplochromis_burtoni
ENSXMAG00000008280	farsb	100	67.912	ENSHGLG00000015965	FARSB	100	75.763	Heterocephalus_glaber_female
ENSXMAG00000008280	farsb	100	67.912	ENSHGLG00100001035	FARSB	100	75.763	Heterocephalus_glaber_male
ENSXMAG00000008280	farsb	90	76.331	ENSHCOG00000016462	farsb	100	80.410	Hippocampus_comes
ENSXMAG00000008280	farsb	100	71.986	ENSIPUG00000002754	farsb	100	82.343	Ictalurus_punctatus
ENSXMAG00000008280	farsb	100	67.912	ENSSTOG00000016169	FARSB	100	75.593	Ictidomys_tridecemlineatus
ENSXMAG00000008280	farsb	100	68.081	ENSJJAG00000003267	Farsb	100	75.763	Jaculus_jaculus
ENSXMAG00000008280	farsb	100	75.719	ENSKMAG00000005363	farsb	100	80.203	Kryptolebias_marmoratus
ENSXMAG00000008280	farsb	100	84.888	ENSLBEG00000018127	farsb	100	84.888	Labrus_bergylta
ENSXMAG00000008280	farsb	100	68.591	ENSLACG00000002551	FARSB	100	78.098	Latimeria_chalumnae
ENSXMAG00000008280	farsb	100	71.939	ENSLOCG00000004136	farsb	100	82.173	Lepisosteus_oculatus
ENSXMAG00000008280	farsb	100	67.233	ENSLAFG00000015659	FARSB	100	75.085	Loxodonta_africana
ENSXMAG00000008280	farsb	100	67.572	ENSMFAG00000036645	FARSB	100	75.254	Macaca_fascicularis
ENSXMAG00000008280	farsb	100	65.195	ENSMMUG00000007685	FARSB	100	73.051	Macaca_mulatta
ENSXMAG00000008280	farsb	100	67.233	ENSMNEG00000030672	FARSB	100	75.085	Macaca_nemestrina
ENSXMAG00000008280	farsb	100	67.572	ENSMLEG00000042060	FARSB	100	75.424	Mandrillus_leucophaeus
ENSXMAG00000008280	farsb	100	85.984	ENSMAMG00000011835	farsb	100	85.984	Mastacembelus_armatus
ENSXMAG00000008280	farsb	95	77.897	ENSMZEG00005004544	farsb	100	87.257	Maylandia_zebra
ENSXMAG00000008280	farsb	94	66.190	ENSMGAG00000004670	FARSB	100	74.955	Meleagris_gallopavo
ENSXMAG00000008280	farsb	78	71.875	ENSMAUG00000017805	Farsb	100	71.875	Mesocricetus_auratus
ENSXMAG00000008280	farsb	100	68.591	ENSMICG00000002495	FARSB	100	76.441	Microcebus_murinus
ENSXMAG00000008280	farsb	100	70.139	ENSMOCG00000003181	Farsb	100	76.570	Microtus_ochrogaster
ENSXMAG00000008280	farsb	100	68.081	ENSMMOG00000006265	farsb	100	80.306	Mola_mola
ENSXMAG00000008280	farsb	100	68.421	ENSMODG00000021192	FARSB	100	77.080	Monodelphis_domestica
ENSXMAG00000008280	farsb	90	83.845	ENSMALG00000021188	farsb	92	89.150	Monopterus_albus
ENSXMAG00000008280	farsb	100	67.572	MGP_CAROLIEiJ_G0014310	Farsb	100	75.424	Mus_caroli
ENSXMAG00000008280	farsb	100	67.572	ENSMUSG00000026245	Farsb	100	75.254	Mus_musculus
ENSXMAG00000008280	farsb	100	67.572	MGP_PahariEiJ_G0027548	Farsb	100	75.424	Mus_pahari
ENSXMAG00000008280	farsb	100	67.402	MGP_SPRETEiJ_G0015116	Farsb	100	75.254	Mus_spretus
ENSXMAG00000008280	farsb	100	67.742	ENSMPUG00000016677	FARSB	100	75.593	Mustela_putorius_furo
ENSXMAG00000008280	farsb	100	68.421	ENSMLUG00000010904	FARSB	100	76.441	Myotis_lucifugus
ENSXMAG00000008280	farsb	100	67.347	ENSNGAG00000014602	Farsb	100	75.042	Nannospalax_galili
ENSXMAG00000008280	farsb	100	86.557	ENSNBRG00000003198	farsb	100	86.557	Neolamprologus_brichardi
ENSXMAG00000008280	farsb	100	67.742	ENSNLEG00000009638	FARSB	100	75.593	Nomascus_leucogenys
ENSXMAG00000008280	farsb	100	59.083	ENSMEUG00000010798	FARSB	100	67.572	Notamacropus_eugenii
ENSXMAG00000008280	farsb	88	67.626	ENSOPRG00000003292	FARSB	89	69.286	Ochotona_princeps
ENSXMAG00000008280	farsb	99	82.979	ENSODEG00000005451	FARSB	100	76.441	Octodon_degus
ENSXMAG00000008280	farsb	100	78.608	ENSONIG00000014639	farsb	100	90.662	Oreochromis_niloticus
ENSXMAG00000008280	farsb	87	72.979	ENSOANG00000015387	FARSB	97	75.577	Ornithorhynchus_anatinus
ENSXMAG00000008280	farsb	90	74.385	ENSOCUG00000007828	FARSB	94	75.696	Oryctolagus_cuniculus
ENSXMAG00000008280	farsb	100	85.596	ENSORLG00000009135	farsb	100	87.267	Oryzias_latipes
ENSXMAG00000008280	farsb	100	85.124	ENSORLG00015001072	farsb	100	86.676	Oryzias_latipes_hsok
ENSXMAG00000008280	farsb	100	84.888	ENSOMEG00000019009	farsb	100	84.890	Oryzias_melastigma
ENSXMAG00000008280	farsb	100	62.312	ENSOGAG00000010125	FARSB	100	70.401	Otolemur_garnettii
ENSXMAG00000008280	farsb	100	68.081	ENSOARG00000020329	FARSB	100	75.932	Ovis_aries
ENSXMAG00000008280	farsb	100	68.081	ENSPPAG00000039268	FARSB	100	75.932	Pan_paniscus
ENSXMAG00000008280	farsb	100	67.912	ENSPPRG00000010687	FARSB	100	75.932	Panthera_pardus
ENSXMAG00000008280	farsb	100	67.742	ENSPTIG00000004299	FARSB	100	75.763	Panthera_tigris_altaica
ENSXMAG00000008280	farsb	100	68.081	ENSPTRG00000012974	FARSB	100	75.932	Pan_troglodytes
ENSXMAG00000008280	farsb	100	67.572	ENSPANG00000016304	FARSB	100	75.424	Papio_anubis
ENSXMAG00000008280	farsb	100	70.289	ENSPKIG00000006661	farsb	100	80.645	Paramormyrops_kingsleyae
ENSXMAG00000008280	farsb	99	66.951	ENSPSIG00000006248	FARSB	99	76.150	Pelodiscus_sinensis
ENSXMAG00000008280	farsb	83	78.992	ENSPMGG00000002815	farsb	100	87.935	Periophthalmus_magnuspinnatus
ENSXMAG00000008280	farsb	100	67.912	ENSPEMG00000003131	Farsb	100	75.763	Peromyscus_maniculatus_bairdii
ENSXMAG00000008280	farsb	100	74.721	ENSPCIG00000019458	FARSB	100	76.910	Phascolarctos_cinereus
ENSXMAG00000008280	farsb	100	96.104	ENSPLAG00000001104	farsb	100	96.104	Poecilia_latipinna
ENSXMAG00000008280	farsb	100	96.340	ENSPMEG00000017658	farsb	100	96.340	Poecilia_mexicana
ENSXMAG00000008280	farsb	100	95.632	ENSPREG00000010583	farsb	100	95.632	Poecilia_reticulata
ENSXMAG00000008280	farsb	100	67.742	ENSPPYG00000013221	FARSB	100	75.593	Pongo_abelii
ENSXMAG00000008280	farsb	83	61.635	ENSPCAG00000002757	FARSB	85	67.200	Procavia_capensis
ENSXMAG00000008280	farsb	66	92.105	ENSPCOG00000028852	FARSB	100	92.105	Propithecus_coquereli
ENSXMAG00000008280	farsb	100	67.572	ENSPVAG00000006985	FARSB	100	75.763	Pteropus_vampyrus
ENSXMAG00000008280	farsb	100	65.986	ENSPNYG00000011433	farsb	100	77.589	Pundamilia_nyererei
ENSXMAG00000008280	farsb	100	73.005	ENSPNAG00000021802	farsb	100	83.362	Pygocentrus_nattereri
ENSXMAG00000008280	farsb	100	67.402	ENSRNOG00000014119	Farsb	100	75.254	Rattus_norvegicus
ENSXMAG00000008280	farsb	90	73.975	ENSRBIG00000033191	FARSB	98	74.862	Rhinopithecus_bieti
ENSXMAG00000008280	farsb	100	67.572	ENSRROG00000029388	FARSB	100	75.424	Rhinopithecus_roxellana
ENSXMAG00000008280	farsb	100	40.099	YLR060W	FRS1	100	44.754	Saccharomyces_cerevisiae
ENSXMAG00000008280	farsb	100	60.441	ENSSBOG00000019084	FARSB	100	67.966	Saimiri_boliviensis_boliviensis
ENSXMAG00000008280	farsb	88	70.084	ENSSHAG00000015752	FARSB	99	70.750	Sarcophilus_harrisii
ENSXMAG00000008280	farsb	100	70.408	ENSSFOG00015007850	farsb	100	80.306	Scleropages_formosus
ENSXMAG00000008280	farsb	100	85.412	ENSSMAG00000020668	farsb	100	87.606	Scophthalmus_maximus
ENSXMAG00000008280	farsb	98	87.112	ENSSDUG00000009685	farsb	100	87.112	Seriola_dumerili
ENSXMAG00000008280	farsb	100	87.294	ENSSLDG00000025206	farsb	100	87.294	Seriola_lalandi_dorsalis
ENSXMAG00000008280	farsb	57	81.250	ENSSARG00000005655	-	66	74.658	Sorex_araneus
ENSXMAG00000008280	farsb	94	70.095	ENSSPUG00000002245	FARSB	100	72.371	Sphenodon_punctatus
ENSXMAG00000008280	farsb	100	86.808	ENSSPAG00000007367	farsb	100	86.808	Stegastes_partitus
ENSXMAG00000008280	farsb	100	61.630	ENSSSCG00000032016	-	100	69.492	Sus_scrofa
ENSXMAG00000008280	farsb	100	73.371	ENSSSCG00000016226	-	100	74.915	Sus_scrofa
ENSXMAG00000008280	farsb	96	66.081	ENSTGUG00000007788	FARSB	99	74.517	Taeniopygia_guttata
ENSXMAG00000008280	farsb	100	81.464	ENSTRUG00000009483	farsb	100	81.464	Takifugu_rubripes
ENSXMAG00000008280	farsb	100	74.320	ENSTNIG00000014310	farsb	100	85.229	Tetraodon_nigroviridis
ENSXMAG00000008280	farsb	91	74.419	ENSTBEG00000003136	FARSB	84	74.419	Tupaia_belangeri
ENSXMAG00000008280	farsb	86	62.500	ENSTTRG00000009082	FARSB	88	75.377	Tursiops_truncatus
ENSXMAG00000008280	farsb	85	64.609	ENSUAMG00000024613	FARSB	99	71.257	Ursus_americanus
ENSXMAG00000008280	farsb	100	67.572	ENSUMAG00000017995	FARSB	100	75.424	Ursus_maritimus
ENSXMAG00000008280	farsb	90	70.000	ENSVPAG00000006844	FARSB	100	71.956	Vicugna_pacos
ENSXMAG00000008280	farsb	96	74.275	ENSVVUG00000024025	FARSB	100	76.102	Vulpes_vulpes
ENSXMAG00000008280	farsb	100	66.553	ENSXETG00000002934	farsb	100	75.465	Xenopus_tropicalis