EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008294 (Gene tree)
Gene ID: 102222964
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 11846 bases
Position: chr11:7859614-7871459
Accession: 102222964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000034711	MMR_HSR1	PF01926.23	2.6e-05	1	1
ENSXMAP00000008315	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028488	-	402	-	ENSXMAP00000034711	133 (aa)	-	-
ENSXMAT00000008326	-	3129	XM_005807199	ENSXMAP00000008315	198 (aa)	XP_005807256	M4A1H1

Gene Model

Click here to download ENSXMAG00000008294's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008294	sar1b	100	93.939	ENSAPOG00000007186	sar1b	100	93.939	Acanthochromis_polyacanthus
ENSXMAG00000008294	sar1b	100	84.343	ENSAPOG00000017891	-	100	84.343	Acanthochromis_polyacanthus
ENSXMAG00000008294	sar1b	100	92.424	ENSACIG00000013634	sar1b	100	92.424	Amphilophus_citrinellus
ENSXMAG00000008294	sar1b	100	82.828	ENSACIG00000024513	-	100	82.828	Amphilophus_citrinellus
ENSXMAG00000008294	sar1b	100	93.434	ENSAOCG00000005888	sar1b	100	93.434	Amphiprion_ocellaris
ENSXMAG00000008294	sar1b	100	84.343	ENSAOCG00000002627	-	100	84.343	Amphiprion_ocellaris
ENSXMAG00000008294	sar1b	100	84.343	ENSAPEG00000019680	-	100	84.343	Amphiprion_percula
ENSXMAG00000008294	sar1b	100	93.434	ENSAPEG00000022771	sar1b	100	93.434	Amphiprion_percula
ENSXMAG00000008294	sar1b	100	82.828	ENSATEG00000023368	-	100	82.828	Anabas_testudineus
ENSXMAG00000008294	sar1b	100	93.939	ENSATEG00000012904	sar1b	100	93.939	Anabas_testudineus
ENSXMAG00000008294	sar1b	100	89.899	ENSACAG00000001470	-	100	89.899	Anolis_carolinensis
ENSXMAG00000008294	sar1b	100	83.838	ENSACLG00000005011	-	100	83.838	Astatotilapia_calliptera
ENSXMAG00000008294	sar1b	100	94.444	ENSACLG00000014649	sar1b	100	94.444	Astatotilapia_calliptera
ENSXMAG00000008294	sar1b	86	91.228	ENSAMXG00000018108	sar1b	84	91.453	Astyanax_mexicanus
ENSXMAG00000008294	sar1b	100	85.859	ENSAMXG00000034192	-	91	85.859	Astyanax_mexicanus
ENSXMAG00000008294	sar1b	100	85.354	ENSCSEG00000015238	sar1b	97	85.354	Cynoglossus_semilaevis
ENSXMAG00000008294	sar1b	100	83.838	ENSCSEG00000016976	-	100	83.838	Cynoglossus_semilaevis
ENSXMAG00000008294	sar1b	100	96.970	ENSCVAG00000022959	sar1b	100	96.970	Cyprinodon_variegatus
ENSXMAG00000008294	sar1b	100	92.929	ENSDARG00000103403	sar1b	100	92.929	Danio_rerio
ENSXMAG00000008294	sar1b	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSXMAG00000008294	sar1b	97	88.021	ENSEBUG00000011723	sar1b	97	88.021	Eptatretus_burgeri
ENSXMAG00000008294	sar1b	100	93.939	ENSELUG00000020912	sar1b	100	93.939	Esox_lucius
ENSXMAG00000008294	sar1b	100	95.960	ENSFHEG00000019865	sar1b	100	95.960	Fundulus_heteroclitus
ENSXMAG00000008294	sar1b	100	94.949	ENSGMOG00000008023	sar1b	100	94.949	Gadus_morhua
ENSXMAG00000008294	sar1b	100	100.000	ENSGAFG00000007081	sar1b	100	100.000	Gambusia_affinis
ENSXMAG00000008294	sar1b	100	91.919	ENSGACG00000001474	sar1b	100	91.919	Gasterosteus_aculeatus
ENSXMAG00000008294	sar1b	100	83.838	ENSHBUG00000018397	-	100	83.838	Haplochromis_burtoni
ENSXMAG00000008294	sar1b	100	94.444	ENSHBUG00000000915	sar1b	100	94.444	Haplochromis_burtoni
ENSXMAG00000008294	sar1b	100	93.434	ENSHCOG00000010953	sar1b	100	93.434	Hippocampus_comes
ENSXMAG00000008294	sar1b	100	91.414	ENSIPUG00000020925	sar1b	100	91.414	Ictalurus_punctatus
ENSXMAG00000008294	sar1b	100	86.869	ENSIPUG00000010046	sar1b	100	86.869	Ictalurus_punctatus
ENSXMAG00000008294	sar1b	100	85.354	ENSKMAG00000014875	-	100	85.354	Kryptolebias_marmoratus
ENSXMAG00000008294	sar1b	100	93.939	ENSKMAG00000019693	sar1b	100	93.939	Kryptolebias_marmoratus
ENSXMAG00000008294	sar1b	100	91.414	ENSLBEG00000027550	sar1b	100	91.414	Labrus_bergylta
ENSXMAG00000008294	sar1b	100	84.848	ENSLBEG00000016945	-	100	84.848	Labrus_bergylta
ENSXMAG00000008294	sar1b	100	85.859	ENSLACG00000010795	sar1b	100	85.859	Latimeria_chalumnae
ENSXMAG00000008294	sar1b	100	74.372	ENSLACG00000017029	-	100	74.372	Latimeria_chalumnae
ENSXMAG00000008294	sar1b	100	89.394	ENSLOCG00000005214	-	100	89.394	Lepisosteus_oculatus
ENSXMAG00000008294	sar1b	100	93.939	ENSLOCG00000010197	sar1b	100	93.939	Lepisosteus_oculatus
ENSXMAG00000008294	sar1b	100	92.929	ENSMAMG00000021732	sar1b	100	92.929	Mastacembelus_armatus
ENSXMAG00000008294	sar1b	100	94.444	ENSMZEG00005008942	sar1b	100	94.444	Maylandia_zebra
ENSXMAG00000008294	sar1b	100	83.838	ENSMZEG00005001012	-	100	83.838	Maylandia_zebra
ENSXMAG00000008294	sar1b	90	91.061	ENSMGAG00000005387	-	91	91.061	Meleagris_gallopavo
ENSXMAG00000008294	sar1b	100	83.333	ENSMMOG00000013803	-	100	83.333	Mola_mola
ENSXMAG00000008294	sar1b	100	94.444	ENSMALG00000016635	sar1b	97	92.857	Monopterus_albus
ENSXMAG00000008294	sar1b	100	83.838	ENSNBRG00000014004	-	100	83.838	Neolamprologus_brichardi
ENSXMAG00000008294	sar1b	100	93.939	ENSNBRG00000008013	sar1b	100	93.939	Neolamprologus_brichardi
ENSXMAG00000008294	sar1b	100	92.929	ENSONIG00000017278	sar1b	100	92.929	Oreochromis_niloticus
ENSXMAG00000008294	sar1b	100	91.414	ENSORLG00000000932	sar1b	100	91.414	Oryzias_latipes
ENSXMAG00000008294	sar1b	100	91.414	ENSORLG00020021985	sar1b	100	91.414	Oryzias_latipes_hni
ENSXMAG00000008294	sar1b	100	91.414	ENSORLG00015007044	sar1b	100	91.414	Oryzias_latipes_hsok
ENSXMAG00000008294	sar1b	100	92.424	ENSOMEG00000001052	sar1b	100	92.424	Oryzias_melastigma
ENSXMAG00000008294	sar1b	100	92.929	ENSPKIG00000017353	-	100	92.929	Paramormyrops_kingsleyae
ENSXMAG00000008294	sar1b	100	93.434	ENSPKIG00000010688	sar1b	100	93.434	Paramormyrops_kingsleyae
ENSXMAG00000008294	sar1b	84	93.750	ENSPMGG00000001234	sar1b	91	93.966	Periophthalmus_magnuspinnatus
ENSXMAG00000008294	sar1b	100	82.587	ENSPMAG00000003593	sar1b	100	82.587	Petromyzon_marinus
ENSXMAG00000008294	sar1b	100	99.495	ENSPFOG00000005666	sar1b	100	99.495	Poecilia_formosa
ENSXMAG00000008294	sar1b	90	82.500	ENSPLAG00000001016	-	75	86.325	Poecilia_latipinna
ENSXMAG00000008294	sar1b	100	98.485	ENSPLAG00000012223	sar1b	100	98.485	Poecilia_latipinna
ENSXMAG00000008294	sar1b	100	99.495	ENSPMEG00000016831	sar1b	100	99.495	Poecilia_mexicana
ENSXMAG00000008294	sar1b	100	99.495	ENSPREG00000005312	sar1b	90	99.495	Poecilia_reticulata
ENSXMAG00000008294	sar1b	86	85.965	ENSPREG00000002020	-	87	85.593	Poecilia_reticulata
ENSXMAG00000008294	sar1b	100	94.444	ENSPNYG00000012440	sar1b	100	94.444	Pundamilia_nyererei
ENSXMAG00000008294	sar1b	100	83.838	ENSPNYG00000021357	-	100	83.838	Pundamilia_nyererei
ENSXMAG00000008294	sar1b	100	93.434	ENSPNAG00000014683	sar1b	100	93.434	Pygocentrus_nattereri
ENSXMAG00000008294	sar1b	100	86.364	ENSPNAG00000001123	-	100	86.364	Pygocentrus_nattereri
ENSXMAG00000008294	sar1b	100	93.939	ENSSFOG00015020051	sar1b	100	93.939	Scleropages_formosus
ENSXMAG00000008294	sar1b	100	91.919	ENSSFOG00015018128	-	100	91.919	Scleropages_formosus
ENSXMAG00000008294	sar1b	100	84.343	ENSSMAG00000002165	-	100	84.343	Scophthalmus_maximus
ENSXMAG00000008294	sar1b	100	90.404	ENSSMAG00000007106	sar1b	80	90.404	Scophthalmus_maximus
ENSXMAG00000008294	sar1b	100	83.838	ENSSDUG00000019629	-	100	83.838	Seriola_dumerili
ENSXMAG00000008294	sar1b	100	93.939	ENSSDUG00000020926	sar1b	100	93.939	Seriola_dumerili
ENSXMAG00000008294	sar1b	100	83.838	ENSSLDG00000024197	-	100	83.838	Seriola_lalandi_dorsalis
ENSXMAG00000008294	sar1b	100	93.939	ENSSLDG00000017052	sar1b	100	93.939	Seriola_lalandi_dorsalis
ENSXMAG00000008294	sar1b	100	89.899	ENSSPUG00000010247	-	100	89.899	Sphenodon_punctatus
ENSXMAG00000008294	sar1b	100	83.838	ENSSPAG00000015626	-	100	83.838	Stegastes_partitus
ENSXMAG00000008294	sar1b	100	94.444	ENSSPAG00000017634	sar1b	100	94.444	Stegastes_partitus
ENSXMAG00000008294	sar1b	100	87.374	ENSTRUG00000023908	sar1b	100	87.374	Takifugu_rubripes
ENSXMAG00000008294	sar1b	100	89.899	ENSTNIG00000016097	sar1b	100	89.899	Tetraodon_nigroviridis
ENSXMAG00000008294	sar1b	90	100.000	ENSXCOG00000004160	sar1b	87	100.000	Xiphophorus_couchianus
ENSXMAG00000008294	sar1b	98	77.444	ENSXCOG00000006154	-	89	77.444	Xiphophorus_couchianus