EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008396 (Gene tree)
Gene ID: 102225900
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 111858 bases
Position: chr21:5192406-5304263
Accession: 102225900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000027520	RRM_1	PF00076.22	9.8e-11	1	1
ENSXMAP00000023460	RRM_1	PF00076.22	1.1e-10	1	1
ENSXMAP00000008417	RRM_1	PF00076.22	1.2e-10	1	1
ENSXMAP00000036699	RRM_1	PF00076.22	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008429	-	1040	-	ENSXMAP00000008417	305 (aa)	-	M4A1S3
ENSXMAT00000030138	-	1409	XM_014471267	ENSXMAP00000023460	292 (aa)	XP_014326753	UPI000293AA04
ENSXMAT00000037262	-	1361	XM_023326747	ENSXMAP00000027520	276 (aa)	XP_023182515	UPI00072E33BA
ENSXMAT00000025829	-	1442	-	ENSXMAP00000036699	305 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000008396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008396	-	100	73.649	ENSAPOG00000008744	-	100	73.649	Acanthochromis_polyacanthus
ENSXMAG00000008396	-	97	67.698	ENSACIG00000007143	-	97	68.151	Amphilophus_citrinellus
ENSXMAG00000008396	-	100	97.603	ENSAOCG00000001605	-	100	97.603	Amphiprion_ocellaris
ENSXMAG00000008396	-	100	74.324	ENSAOCG00000023599	-	100	74.324	Amphiprion_ocellaris
ENSXMAG00000008396	-	77	95.556	ENSATEG00000023356	-	87	95.556	Anabas_testudineus
ENSXMAG00000008396	-	97	66.779	ENSATEG00000022219	-	99	68.770	Anabas_testudineus
ENSXMAG00000008396	-	100	74.576	ENSACLG00000011720	-	100	74.576	Astatotilapia_calliptera
ENSXMAG00000008396	-	100	97.270	ENSACLG00000006949	-	100	97.270	Astatotilapia_calliptera
ENSXMAG00000008396	-	100	64.983	ENSAMXG00000032617	-	100	64.983	Astyanax_mexicanus
ENSXMAG00000008396	-	100	89.493	ENSAMXG00000019031	-	100	89.493	Astyanax_mexicanus
ENSXMAG00000008396	-	100	68.243	ENSCSEG00000014237	-	100	67.905	Cynoglossus_semilaevis
ENSXMAG00000008396	-	100	73.311	ENSCVAG00000013624	-	100	73.311	Cyprinodon_variegatus
ENSXMAG00000008396	-	100	97.611	ENSCVAG00000018104	-	100	97.611	Cyprinodon_variegatus
ENSXMAG00000008396	-	59	76.608	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSXMAG00000008396	-	94	75.269	ENSELUG00000001702	-	97	77.061	Esox_lucius
ENSXMAG00000008396	-	57	79.394	ENSGMOG00000005914	-	100	79.394	Gadus_morhua
ENSXMAG00000008396	-	59	92.486	ENSGACG00000004991	-	91	94.578	Gasterosteus_aculeatus
ENSXMAG00000008396	-	100	97.270	ENSHBUG00000015412	-	100	97.270	Haplochromis_burtoni
ENSXMAG00000008396	-	100	74.324	ENSHBUG00000010040	-	100	74.324	Haplochromis_burtoni
ENSXMAG00000008396	-	100	89.384	ENSIPUG00000000507	ralyl	100	89.384	Ictalurus_punctatus
ENSXMAG00000008396	-	100	97.260	ENSKMAG00000018155	-	100	97.260	Kryptolebias_marmoratus
ENSXMAG00000008396	-	100	70.946	ENSKMAG00000022093	-	100	72.635	Kryptolebias_marmoratus
ENSXMAG00000008396	-	100	93.174	ENSLBEG00000011011	-	100	93.515	Labrus_bergylta
ENSXMAG00000008396	-	100	73.986	ENSLBEG00000012873	-	100	73.649	Labrus_bergylta
ENSXMAG00000008396	-	100	83.219	ENSLOCG00000012787	ralyl	99	82.877	Lepisosteus_oculatus
ENSXMAG00000008396	-	99	70.345	ENSMAMG00000001723	-	97	70.345	Mastacembelus_armatus
ENSXMAG00000008396	-	98	92.440	ENSMZEG00005018748	-	100	91.126	Maylandia_zebra
ENSXMAG00000008396	-	100	74.576	ENSMZEG00005024447	-	100	74.576	Maylandia_zebra
ENSXMAG00000008396	-	97	67.000	ENSMMOG00000020441	-	86	68.439	Mola_mola
ENSXMAG00000008396	-	100	95.548	ENSMALG00000012952	-	100	95.548	Monopterus_albus
ENSXMAG00000008396	-	100	74.324	ENSMALG00000019019	-	78	74.324	Monopterus_albus
ENSXMAG00000008396	-	98	93.471	ENSNBRG00000011376	-	100	93.857	Neolamprologus_brichardi
ENSXMAG00000008396	-	97	68.385	ENSNBRG00000011206	-	97	68.836	Neolamprologus_brichardi
ENSXMAG00000008396	-	100	97.945	ENSORLG00000012719	-	100	97.945	Oryzias_latipes
ENSXMAG00000008396	-	100	73.311	ENSORLG00000017934	-	100	71.622	Oryzias_latipes
ENSXMAG00000008396	-	100	71.622	ENSORLG00020000082	-	100	70.946	Oryzias_latipes_hni
ENSXMAG00000008396	-	100	97.945	ENSORLG00020004438	-	100	97.945	Oryzias_latipes_hni
ENSXMAG00000008396	-	100	97.945	ENSORLG00015004727	-	100	97.945	Oryzias_latipes_hsok
ENSXMAG00000008396	-	100	73.311	ENSORLG00015004280	-	100	71.622	Oryzias_latipes_hsok
ENSXMAG00000008396	-	100	72.973	ENSOMEG00000011821	-	100	71.284	Oryzias_melastigma
ENSXMAG00000008396	-	100	98.551	ENSOMEG00000001170	-	100	98.551	Oryzias_melastigma
ENSXMAG00000008396	-	100	79.522	ENSPKIG00000015926	-	100	79.522	Paramormyrops_kingsleyae
ENSXMAG00000008396	-	99	67.230	ENSPMGG00000009532	-	98	68.601	Periophthalmus_magnuspinnatus
ENSXMAG00000008396	-	80	82.278	ENSPMGG00000014481	-	98	81.013	Periophthalmus_magnuspinnatus
ENSXMAG00000008396	-	97	70.805	ENSPFOG00000006120	-	99	71.141	Poecilia_formosa
ENSXMAG00000008396	-	97	98.951	ENSPLAG00000011323	ralyl	100	98.951	Poecilia_latipinna
ENSXMAG00000008396	-	97	70.588	ENSPLAG00000009877	-	76	70.073	Poecilia_latipinna
ENSXMAG00000008396	-	97	70.588	ENSPMEG00000013624	-	80	70.073	Poecilia_mexicana
ENSXMAG00000008396	-	97	98.951	ENSPMEG00000023847	ralyl	100	98.951	Poecilia_mexicana
ENSXMAG00000008396	-	97	73.519	ENSPREG00000013805	-	100	68.354	Poecilia_reticulata
ENSXMAG00000008396	-	97	96.853	ENSPREG00000001956	ralyl	100	96.853	Poecilia_reticulata
ENSXMAG00000008396	-	98	92.440	ENSPNYG00000003548	-	100	91.126	Pundamilia_nyererei
ENSXMAG00000008396	-	97	68.385	ENSPNYG00000008772	-	97	68.836	Pundamilia_nyererei
ENSXMAG00000008396	-	100	89.855	ENSPNAG00000000498	-	88	89.493	Pygocentrus_nattereri
ENSXMAG00000008396	-	100	68.259	ENSPNAG00000026098	-	100	67.466	Pygocentrus_nattereri
ENSXMAG00000008396	-	91	80.080	ENSSFOG00015004575	-	96	79.775	Scleropages_formosus
ENSXMAG00000008396	-	100	89.796	ENSSFOG00015009401	-	100	88.095	Scleropages_formosus
ENSXMAG00000008396	-	97	71.228	ENSSMAG00000015907	-	99	69.079	Scophthalmus_maximus
ENSXMAG00000008396	-	100	94.521	ENSSMAG00000005608	-	100	94.521	Scophthalmus_maximus
ENSXMAG00000008396	-	100	97.603	ENSSDUG00000007587	-	100	97.603	Seriola_dumerili
ENSXMAG00000008396	-	100	74.324	ENSSDUG00000012473	-	100	74.324	Seriola_dumerili
ENSXMAG00000008396	-	100	96.928	ENSSLDG00000020603	-	100	96.928	Seriola_lalandi_dorsalis
ENSXMAG00000008396	-	100	73.986	ENSSLDG00000011534	-	100	73.986	Seriola_lalandi_dorsalis
ENSXMAG00000008396	-	97	66.058	ENSSPAG00000013858	-	96	64.311	Stegastes_partitus
ENSXMAG00000008396	-	82	76.569	ENSTRUG00000003829	-	96	72.183	Takifugu_rubripes
ENSXMAG00000008396	-	97	68.027	ENSTNIG00000005594	-	99	68.475	Tetraodon_nigroviridis
ENSXMAG00000008396	-	100	70.748	ENSXETG00000017729	ralyl	99	71.769	Xenopus_tropicalis
ENSXMAG00000008396	-	97	95.918	ENSXCOG00000015156	-	95	95.667	Xiphophorus_couchianus
ENSXMAG00000008396	-	100	74.324	ENSXMAG00000007614	-	100	74.324	Xiphophorus_maculatus