EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008485 (Gene tree)
Gene ID: 102231739
Gene Symbol: prpf19
Alias: fb18f09|prp19|wu:fb18f09|zgc:56158
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6222 bases
Position: chr23:17586845-17593066
Accession: 102231739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008514	Prp19	PF08606.11	5.4e-33	1	1
ENSXMAP00000036126	Prp19	PF08606.11	5.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008527	-	2539	XM_005795294	ENSXMAP00000008514	505 (aa)	XP_005795351	M4A220
ENSXMAT00000024199	-	1452	-	ENSXMAP00000036126	483 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000008485's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG
xma04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008485's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008485	prpf19	100	84.356	ENSG00000110107	PRPF19	100	86.667	Homo_sapiens
ENSXMAG00000008485	prpf19	100	96.040	ENSAPOG00000017823	prpf19	100	96.336	Acanthochromis_polyacanthus
ENSXMAG00000008485	prpf19	100	84.337	ENSAMEG00000007375	PRPF19	99	84.337	Ailuropoda_melanoleuca
ENSXMAG00000008485	prpf19	99	94.246	ENSACIG00000015876	prpf19	99	94.246	Amphilophus_citrinellus
ENSXMAG00000008485	prpf19	100	96.040	ENSAOCG00000020444	prpf19	100	96.040	Amphiprion_ocellaris
ENSXMAG00000008485	prpf19	100	96.040	ENSAPEG00000016076	prpf19	100	96.040	Amphiprion_percula
ENSXMAG00000008485	prpf19	100	96.634	ENSATEG00000008840	prpf19	100	96.634	Anabas_testudineus
ENSXMAG00000008485	prpf19	100	84.950	ENSACAG00000017797	PRPF19	100	84.950	Anolis_carolinensis
ENSXMAG00000008485	prpf19	100	84.158	ENSANAG00000021762	PRPF19	100	84.158	Aotus_nancymaae
ENSXMAG00000008485	prpf19	100	95.842	ENSACLG00000009416	prpf19	100	96.336	Astatotilapia_calliptera
ENSXMAG00000008485	prpf19	100	93.069	ENSAMXG00000011547	prpf19	100	93.069	Astyanax_mexicanus
ENSXMAG00000008485	prpf19	100	84.356	ENSBTAG00000014366	PRPF19	100	84.356	Bos_taurus
ENSXMAG00000008485	prpf19	100	52.860	WBGene00020423	prp-19	100	52.860	Caenorhabditis_elegans
ENSXMAG00000008485	prpf19	100	84.158	ENSCJAG00000016509	PRPF19	100	84.158	Callithrix_jacchus
ENSXMAG00000008485	prpf19	100	84.356	ENSCAFG00000016438	PRPF19	98	84.356	Canis_familiaris
ENSXMAG00000008485	prpf19	100	84.356	ENSCAFG00020012565	PRPF19	100	84.356	Canis_lupus_dingo
ENSXMAG00000008485	prpf19	100	84.356	ENSCHIG00000018281	PRPF19	100	84.356	Capra_hircus
ENSXMAG00000008485	prpf19	99	84.200	ENSTSYG00000006860	PRPF19	99	84.507	Carlito_syrichta
ENSXMAG00000008485	prpf19	99	84.600	ENSCAPG00000016225	PRPF19	100	84.600	Cavia_aperea
ENSXMAG00000008485	prpf19	100	84.554	ENSCPOG00000020688	PRPF19	100	84.554	Cavia_porcellus
ENSXMAG00000008485	prpf19	100	84.158	ENSCCAG00000025839	PRPF19	100	84.158	Cebus_capucinus
ENSXMAG00000008485	prpf19	100	84.356	ENSCATG00000041921	PRPF19	100	84.356	Cercocebus_atys
ENSXMAG00000008485	prpf19	99	84.569	ENSCLAG00000003338	PRPF19	99	84.909	Chinchilla_lanigera
ENSXMAG00000008485	prpf19	100	84.356	ENSCSAG00000006254	PRPF19	100	84.356	Chlorocebus_sabaeus
ENSXMAG00000008485	prpf19	62	74.359	ENSCHOG00000005840	PRPF19	100	74.359	Choloepus_hoffmanni
ENSXMAG00000008485	prpf19	100	85.520	ENSCPBG00000027061	PRPF19	100	84.158	Chrysemys_picta_bellii
ENSXMAG00000008485	prpf19	99	68.481	ENSCING00000016625	-	100	68.481	Ciona_intestinalis
ENSXMAG00000008485	prpf19	100	68.972	ENSCSAVG00000002027	-	99	69.368	Ciona_savignyi
ENSXMAG00000008485	prpf19	99	81.529	ENSCANG00000027155	PRPF19	99	40.351	Colobus_angolensis_palliatus
ENSXMAG00000008485	prpf19	100	84.356	ENSCGRG00001002699	Prpf19	100	84.356	Cricetulus_griseus_chok1gshd
ENSXMAG00000008485	prpf19	100	83.960	ENSCGRG00000008964	Prpf19	100	83.960	Cricetulus_griseus_crigri
ENSXMAG00000008485	prpf19	100	95.446	ENSCSEG00000010411	prpf19	100	95.446	Cynoglossus_semilaevis
ENSXMAG00000008485	prpf19	100	98.614	ENSCVAG00000012011	prpf19	100	98.614	Cyprinodon_variegatus
ENSXMAG00000008485	prpf19	100	91.881	ENSDARG00000015239	prpf19	100	91.881	Danio_rerio
ENSXMAG00000008485	prpf19	100	84.356	ENSDNOG00000005797	PRPF19	100	84.356	Dasypus_novemcinctus
ENSXMAG00000008485	prpf19	100	84.356	ENSDORG00000006906	Prpf19	100	84.356	Dipodomys_ordii
ENSXMAG00000008485	prpf19	100	66.078	FBgn0261119	Prp19	99	66.078	Drosophila_melanogaster
ENSXMAG00000008485	prpf19	100	73.861	ENSETEG00000012295	PRPF19	100	73.861	Echinops_telfairi
ENSXMAG00000008485	prpf19	86	78.177	ENSEBUG00000013075	prpf19	100	78.147	Eptatretus_burgeri
ENSXMAG00000008485	prpf19	100	84.696	ENSEASG00005008056	PRPF19	98	84.696	Equus_asinus_asinus
ENSXMAG00000008485	prpf19	100	84.158	ENSECAG00000007322	PRPF19	100	84.158	Equus_caballus
ENSXMAG00000008485	prpf19	100	90.495	ENSELUG00000020276	-	100	90.495	Esox_lucius
ENSXMAG00000008485	prpf19	100	86.139	ENSELUG00000004578	prpf19	100	86.139	Esox_lucius
ENSXMAG00000008485	prpf19	100	84.356	ENSFCAG00000013668	PRPF19	100	84.356	Felis_catus
ENSXMAG00000008485	prpf19	100	83.960	ENSFALG00000012084	PRPF19	100	83.960	Ficedula_albicollis
ENSXMAG00000008485	prpf19	86	83.654	ENSFDAG00000009420	PRPF19	96	83.924	Fukomys_damarensis
ENSXMAG00000008485	prpf19	100	98.812	ENSFHEG00000022135	prpf19	100	98.812	Fundulus_heteroclitus
ENSXMAG00000008485	prpf19	100	94.851	ENSGMOG00000014756	prpf19	100	94.851	Gadus_morhua
ENSXMAG00000008485	prpf19	100	84.158	ENSGALG00000036530	PRPF19	100	84.158	Gallus_gallus
ENSXMAG00000008485	prpf19	100	99.604	ENSGAFG00000008931	prpf19	100	99.604	Gambusia_affinis
ENSXMAG00000008485	prpf19	100	94.851	ENSGACG00000017976	prpf19	100	94.851	Gasterosteus_aculeatus
ENSXMAG00000008485	prpf19	100	84.356	ENSGAGG00000013328	PRPF19	100	84.356	Gopherus_agassizii
ENSXMAG00000008485	prpf19	100	84.356	ENSGGOG00000008648	PRPF19	100	84.356	Gorilla_gorilla
ENSXMAG00000008485	prpf19	100	95.842	ENSHBUG00000008394	prpf19	100	95.842	Haplochromis_burtoni
ENSXMAG00000008485	prpf19	100	84.356	ENSHGLG00000003934	PRPF19	100	84.356	Heterocephalus_glaber_female
ENSXMAG00000008485	prpf19	98	69.451	ENSHGLG00100010649	PRPF19	99	67.807	Heterocephalus_glaber_male
ENSXMAG00000008485	prpf19	100	93.465	ENSHCOG00000016720	prpf19	100	93.465	Hippocampus_comes
ENSXMAG00000008485	prpf19	100	92.673	ENSIPUG00000013084	prpf19	100	92.673	Ictalurus_punctatus
ENSXMAG00000008485	prpf19	100	84.158	ENSSTOG00000001598	PRPF19	100	84.158	Ictidomys_tridecemlineatus
ENSXMAG00000008485	prpf19	100	84.554	ENSJJAG00000020609	Prpf19	100	84.554	Jaculus_jaculus
ENSXMAG00000008485	prpf19	100	97.822	ENSKMAG00000010257	prpf19	100	97.822	Kryptolebias_marmoratus
ENSXMAG00000008485	prpf19	100	95.248	ENSLBEG00000027436	prpf19	100	95.248	Labrus_bergylta
ENSXMAG00000008485	prpf19	100	83.762	ENSLACG00000003434	PRPF19	100	83.762	Latimeria_chalumnae
ENSXMAG00000008485	prpf19	91	79.362	ENSLOCG00000008123	prpf19	100	79.362	Lepisosteus_oculatus
ENSXMAG00000008485	prpf19	100	81.226	ENSLAFG00000002644	PRPF19	100	81.226	Loxodonta_africana
ENSXMAG00000008485	prpf19	100	84.356	ENSMFAG00000036743	PRPF19	100	84.356	Macaca_fascicularis
ENSXMAG00000008485	prpf19	100	84.356	ENSMMUG00000014530	PRPF19	100	84.356	Macaca_mulatta
ENSXMAG00000008485	prpf19	100	84.356	ENSMNEG00000044485	PRPF19	100	84.356	Macaca_nemestrina
ENSXMAG00000008485	prpf19	100	84.356	ENSMLEG00000043312	PRPF19	100	84.356	Mandrillus_leucophaeus
ENSXMAG00000008485	prpf19	100	95.842	ENSMAMG00000006843	prpf19	100	96.552	Mastacembelus_armatus
ENSXMAG00000008485	prpf19	100	95.842	ENSMZEG00005013356	prpf19	100	95.842	Maylandia_zebra
ENSXMAG00000008485	prpf19	98	79.600	ENSMGAG00000003180	PRPF19	100	79.600	Meleagris_gallopavo
ENSXMAG00000008485	prpf19	100	83.762	ENSMAUG00000012585	Prpf19	100	83.762	Mesocricetus_auratus
ENSXMAG00000008485	prpf19	100	84.356	ENSMICG00000011236	PRPF19	100	84.356	Microcebus_murinus
ENSXMAG00000008485	prpf19	100	84.356	ENSMOCG00000010383	Prpf19	100	84.356	Microtus_ochrogaster
ENSXMAG00000008485	prpf19	100	95.842	ENSMMOG00000003138	prpf19	100	95.842	Mola_mola
ENSXMAG00000008485	prpf19	100	84.752	ENSMODG00000020338	PRPF19	100	84.752	Monodelphis_domestica
ENSXMAG00000008485	prpf19	99	86.381	ENSMALG00000010981	prpf19	99	86.381	Monopterus_albus
ENSXMAG00000008485	prpf19	100	84.356	MGP_CAROLIEiJ_G0022704	Prpf19	100	84.356	Mus_caroli
ENSXMAG00000008485	prpf19	100	84.356	ENSMUSG00000024735	Prpf19	100	84.356	Mus_musculus
ENSXMAG00000008485	prpf19	100	84.356	MGP_PahariEiJ_G0014198	Prpf19	100	84.356	Mus_pahari
ENSXMAG00000008485	prpf19	100	84.356	MGP_SPRETEiJ_G0023618	Prpf19	100	84.356	Mus_spretus
ENSXMAG00000008485	prpf19	100	84.356	ENSMPUG00000014432	PRPF19	100	84.356	Mustela_putorius_furo
ENSXMAG00000008485	prpf19	100	82.115	ENSMLUG00000017597	PRPF19	100	82.115	Myotis_lucifugus
ENSXMAG00000008485	prpf19	100	84.554	ENSNGAG00000012671	Prpf19	100	84.554	Nannospalax_galili
ENSXMAG00000008485	prpf19	100	96.040	ENSNBRG00000000055	prpf19	100	96.040	Neolamprologus_brichardi
ENSXMAG00000008485	prpf19	100	84.356	ENSNLEG00000013618	PRPF19	100	84.356	Nomascus_leucogenys
ENSXMAG00000008485	prpf19	98	82.294	ENSOPRG00000008630	PRPF19	99	82.294	Ochotona_princeps
ENSXMAG00000008485	prpf19	100	84.752	ENSODEG00000004043	PRPF19	100	84.752	Octodon_degus
ENSXMAG00000008485	prpf19	100	96.040	ENSONIG00000004880	prpf19	100	96.040	Oreochromis_niloticus
ENSXMAG00000008485	prpf19	100	80.989	ENSOCUG00000015689	PRPF19	100	80.989	Oryctolagus_cuniculus
ENSXMAG00000008485	prpf19	100	97.228	ENSORLG00000004666	prpf19	100	97.228	Oryzias_latipes
ENSXMAG00000008485	prpf19	100	97.228	ENSORLG00020013561	prpf19	100	97.228	Oryzias_latipes_hni
ENSXMAG00000008485	prpf19	100	97.228	ENSORLG00015022196	prpf19	100	97.228	Oryzias_latipes_hsok
ENSXMAG00000008485	prpf19	76	30.252	ENSOMEG00000005342	wdr36	64	30.252	Oryzias_melastigma
ENSXMAG00000008485	prpf19	100	97.030	ENSOMEG00000004424	prpf19	100	97.030	Oryzias_melastigma
ENSXMAG00000008485	prpf19	100	84.158	ENSOGAG00000016756	PRPF19	100	84.158	Otolemur_garnettii
ENSXMAG00000008485	prpf19	100	84.356	ENSOARG00000015596	PRPF19	100	84.356	Ovis_aries
ENSXMAG00000008485	prpf19	99	83.301	ENSPPAG00000030246	PRPF19	100	83.301	Pan_paniscus
ENSXMAG00000008485	prpf19	100	84.356	ENSPPRG00000002470	PRPF19	100	84.356	Panthera_pardus
ENSXMAG00000008485	prpf19	98	84.708	ENSPTIG00000006541	PRPF19	98	84.708	Panthera_tigris_altaica
ENSXMAG00000008485	prpf19	100	84.356	ENSPTRG00000003724	PRPF19	100	84.356	Pan_troglodytes
ENSXMAG00000008485	prpf19	100	84.356	ENSPANG00000002762	PRPF19	100	84.356	Papio_anubis
ENSXMAG00000008485	prpf19	100	91.089	ENSPKIG00000019715	prpf19	100	91.089	Paramormyrops_kingsleyae
ENSXMAG00000008485	prpf19	86	83.654	ENSPSIG00000007497	PRPF19	100	83.810	Pelodiscus_sinensis
ENSXMAG00000008485	prpf19	100	94.257	ENSPMGG00000017527	prpf19	100	94.257	Periophthalmus_magnuspinnatus
ENSXMAG00000008485	prpf19	100	83.960	ENSPEMG00000019270	Prpf19	100	83.960	Peromyscus_maniculatus_bairdii
ENSXMAG00000008485	prpf19	99	84.388	ENSPCIG00000003485	PRPF19	80	84.388	Phascolarctos_cinereus
ENSXMAG00000008485	prpf19	100	99.802	ENSPFOG00000002558	prpf19	100	99.802	Poecilia_formosa
ENSXMAG00000008485	prpf19	100	99.802	ENSPLAG00000017942	prpf19	100	99.802	Poecilia_latipinna
ENSXMAG00000008485	prpf19	100	99.802	ENSPMEG00000008638	prpf19	100	99.802	Poecilia_mexicana
ENSXMAG00000008485	prpf19	100	100.000	ENSPREG00000002489	prpf19	96	100.000	Poecilia_reticulata
ENSXMAG00000008485	prpf19	100	84.906	ENSPPYG00000003202	PRPF19	91	84.906	Pongo_abelii
ENSXMAG00000008485	prpf19	100	83.762	ENSPCAG00000001930	PRPF19	100	83.762	Procavia_capensis
ENSXMAG00000008485	prpf19	100	85.412	ENSPCOG00000014017	PRPF19	100	85.412	Propithecus_coquereli
ENSXMAG00000008485	prpf19	100	84.356	ENSPVAG00000014669	PRPF19	100	84.356	Pteropus_vampyrus
ENSXMAG00000008485	prpf19	100	95.842	ENSPNYG00000000859	prpf19	100	95.842	Pundamilia_nyererei
ENSXMAG00000008485	prpf19	100	93.069	ENSPNAG00000019245	prpf19	100	93.069	Pygocentrus_nattereri
ENSXMAG00000008485	prpf19	100	84.356	ENSRNOG00000020897	Prpf19	100	84.356	Rattus_norvegicus
ENSXMAG00000008485	prpf19	100	84.356	ENSRBIG00000036672	PRPF19	100	84.356	Rhinopithecus_bieti
ENSXMAG00000008485	prpf19	100	84.356	ENSRROG00000041572	PRPF19	100	84.356	Rhinopithecus_roxellana
ENSXMAG00000008485	prpf19	100	84.158	ENSSBOG00000022840	PRPF19	100	84.158	Saimiri_boliviensis_boliviensis
ENSXMAG00000008485	prpf19	100	84.356	ENSSHAG00000009462	PRPF19	100	84.356	Sarcophilus_harrisii
ENSXMAG00000008485	prpf19	100	91.683	ENSSFOG00015001236	prpf19	100	91.683	Scleropages_formosus
ENSXMAG00000008485	prpf19	100	96.436	ENSSMAG00000002273	prpf19	100	96.436	Scophthalmus_maximus
ENSXMAG00000008485	prpf19	100	96.832	ENSSDUG00000003299	prpf19	100	96.832	Seriola_dumerili
ENSXMAG00000008485	prpf19	100	96.832	ENSSLDG00000003019	prpf19	100	96.832	Seriola_lalandi_dorsalis
ENSXMAG00000008485	prpf19	100	83.564	ENSSPUG00000019328	PRPF19	100	83.564	Sphenodon_punctatus
ENSXMAG00000008485	prpf19	100	96.436	ENSSPAG00000008546	prpf19	100	96.436	Stegastes_partitus
ENSXMAG00000008485	prpf19	100	84.158	ENSSSCG00000013107	PRPF19	100	84.158	Sus_scrofa
ENSXMAG00000008485	prpf19	100	83.960	ENSTGUG00000006319	PRPF19	100	83.960	Taeniopygia_guttata
ENSXMAG00000008485	prpf19	100	94.455	ENSTRUG00000008502	prpf19	100	94.455	Takifugu_rubripes
ENSXMAG00000008485	prpf19	100	72.934	ENSTNIG00000014219	prpf19	100	72.934	Tetraodon_nigroviridis
ENSXMAG00000008485	prpf19	100	83.960	ENSTTRG00000012476	PRPF19	100	83.960	Tursiops_truncatus
ENSXMAG00000008485	prpf19	100	84.356	ENSUAMG00000011280	PRPF19	100	84.356	Ursus_americanus
ENSXMAG00000008485	prpf19	86	83.413	ENSUMAG00000011609	PRPF19	83	83.688	Ursus_maritimus
ENSXMAG00000008485	prpf19	98	85.463	ENSVPAG00000010516	PRPF19	99	85.463	Vicugna_pacos
ENSXMAG00000008485	prpf19	100	84.356	ENSVVUG00000005291	PRPF19	100	84.356	Vulpes_vulpes
ENSXMAG00000008485	prpf19	100	80.455	ENSXETG00000011938	prpf19	100	80.455	Xenopus_tropicalis
ENSXMAG00000008485	prpf19	100	99.802	ENSXCOG00000003141	prpf19	100	99.802	Xiphophorus_couchianus