EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008505 (Gene tree)
Gene ID: 102224828
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 14793 bases
Position: chr18:20320526-20335318
Accession: 102224828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008559	RRM_4	PF10598.9	3.4e-48	1	1
ENSXMAP00000008559	U5_2-snRNA_bdg	PF10597.9	8e-74	1	1
ENSXMAP00000008559	PRO8NT	PF08082.11	2.4e-87	1	1
ENSXMAP00000008559	U6-snRNA_bdg	PF10596.9	2e-89	1	1
ENSXMAP00000008559	PROCN	PF08083.11	3.3e-234	1	1
ENSXMAP00000008559	PRP8_domainIV	PF12134.8	4.7e-130	1	1
ENSXMAP00000008559	PROCT	PF08084.11	3.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008572	-	7026	XM_014469526	ENSXMAP00000008559	2341 (aa)	XP_014325012	M4A265

Gene Model

Click here to download ENSXMAG00000008505's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008505	prpf8	100	97.523	ENSG00000174231	PRPF8	100	97.523	Homo_sapiens
ENSXMAG00000008505	prpf8	100	98.932	ENSAPOG00000010079	prpf8	100	98.932	Acanthochromis_polyacanthus
ENSXMAG00000008505	prpf8	100	97.523	ENSAMEG00000007940	PRPF8	100	97.523	Ailuropoda_melanoleuca
ENSXMAG00000008505	prpf8	100	97.155	ENSACIG00000018280	prpf8	100	97.155	Amphilophus_citrinellus
ENSXMAG00000008505	prpf8	100	98.932	ENSAOCG00000010725	prpf8	100	98.932	Amphiprion_ocellaris
ENSXMAG00000008505	prpf8	100	98.932	ENSAPEG00000014397	prpf8	100	98.932	Amphiprion_percula
ENSXMAG00000008505	prpf8	100	98.334	ENSATEG00000010062	prpf8	100	98.334	Anabas_testudineus
ENSXMAG00000008505	prpf8	96	98.043	ENSAPLG00000010357	PRPF8	100	98.043	Anas_platyrhynchos
ENSXMAG00000008505	prpf8	83	96.039	ENSACAG00000014784	PRPF8	99	96.039	Anolis_carolinensis
ENSXMAG00000008505	prpf8	100	97.523	ENSANAG00000032629	PRPF8	100	97.523	Aotus_nancymaae
ENSXMAG00000008505	prpf8	100	98.426	ENSACLG00000020858	prpf8	100	98.426	Astatotilapia_calliptera
ENSXMAG00000008505	prpf8	100	98.505	ENSAMXG00000020291	prpf8	100	98.505	Astyanax_mexicanus
ENSXMAG00000008505	prpf8	100	97.523	ENSBTAG00000011488	PRPF8	100	97.523	Bos_taurus
ENSXMAG00000008505	prpf8	99	86.377	WBGene00004187	prp-8	99	86.894	Caenorhabditis_elegans
ENSXMAG00000008505	prpf8	100	97.523	ENSCJAG00000001911	PRPF8	100	97.523	Callithrix_jacchus
ENSXMAG00000008505	prpf8	100	97.523	ENSCAFG00000019221	PRPF8	100	97.523	Canis_familiaris
ENSXMAG00000008505	prpf8	96	98.037	ENSCAFG00020009943	PRPF8	100	98.037	Canis_lupus_dingo
ENSXMAG00000008505	prpf8	100	97.523	ENSCHIG00000017499	PRPF8	100	97.523	Capra_hircus
ENSXMAG00000008505	prpf8	100	97.523	ENSTSYG00000014120	PRPF8	100	97.523	Carlito_syrichta
ENSXMAG00000008505	prpf8	96	95.813	ENSCAPG00000009459	PRPF8	99	95.813	Cavia_aperea
ENSXMAG00000008505	prpf8	100	97.523	ENSCPOG00000010379	PRPF8	100	97.523	Cavia_porcellus
ENSXMAG00000008505	prpf8	100	97.523	ENSCCAG00000031983	-	100	97.523	Cebus_capucinus
ENSXMAG00000008505	prpf8	100	97.523	ENSCATG00000038595	PRPF8	100	97.523	Cercocebus_atys
ENSXMAG00000008505	prpf8	100	97.523	ENSCLAG00000004388	PRPF8	100	97.523	Chinchilla_lanigera
ENSXMAG00000008505	prpf8	100	97.523	ENSCSAG00000013929	PRPF8	100	97.523	Chlorocebus_sabaeus
ENSXMAG00000008505	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSXMAG00000008505	prpf8	100	97.481	ENSCPBG00000020409	PRPF8	100	97.481	Chrysemys_picta_bellii
ENSXMAG00000008505	prpf8	98	92.781	ENSCSAVG00000007825	-	100	91.237	Ciona_savignyi
ENSXMAG00000008505	prpf8	100	97.523	ENSCANG00000043088	PRPF8	100	97.523	Colobus_angolensis_palliatus
ENSXMAG00000008505	prpf8	73	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSXMAG00000008505	prpf8	100	98.847	ENSCSEG00000007905	prpf8	100	98.847	Cynoglossus_semilaevis
ENSXMAG00000008505	prpf8	100	98.506	ENSDARG00000026180	prpf8	100	98.506	Danio_rerio
ENSXMAG00000008505	prpf8	93	97.797	ENSDNOG00000018471	PRPF8	99	97.797	Dasypus_novemcinctus
ENSXMAG00000008505	prpf8	84	96.328	ENSDORG00000006185	Prpf8	96	96.328	Dipodomys_ordii
ENSXMAG00000008505	prpf8	99	91.107	FBgn0033688	Prp8	97	91.749	Drosophila_melanogaster
ENSXMAG00000008505	prpf8	100	92.186	ENSETEG00000017592	PRPF8	100	92.186	Echinops_telfairi
ENSXMAG00000008505	prpf8	99	93.145	ENSEBUG00000006548	prpf8	99	93.145	Eptatretus_burgeri
ENSXMAG00000008505	prpf8	100	97.523	ENSEASG00005009514	PRPF8	100	97.523	Equus_asinus_asinus
ENSXMAG00000008505	prpf8	97	98.066	ENSECAG00000021318	PRPF8	100	98.066	Equus_caballus
ENSXMAG00000008505	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSXMAG00000008505	prpf8	98	97.250	ENSELUG00000007120	prpf8	99	97.250	Esox_lucius
ENSXMAG00000008505	prpf8	100	97.523	ENSFCAG00000006297	PRPF8	100	97.523	Felis_catus
ENSXMAG00000008505	prpf8	100	97.566	ENSFALG00000006628	PRPF8	100	97.566	Ficedula_albicollis
ENSXMAG00000008505	prpf8	100	97.523	ENSFDAG00000004711	PRPF8	100	97.523	Fukomys_damarensis
ENSXMAG00000008505	prpf8	100	99.018	ENSFHEG00000021084	prpf8	100	99.018	Fundulus_heteroclitus
ENSXMAG00000008505	prpf8	100	96.451	ENSGMOG00000002028	prpf8	99	96.451	Gadus_morhua
ENSXMAG00000008505	prpf8	100	97.566	ENSGALG00000002943	PRPF8	100	97.566	Gallus_gallus
ENSXMAG00000008505	prpf8	99	99.317	ENSGAFG00000010337	prpf8	99	99.317	Gambusia_affinis
ENSXMAG00000008505	prpf8	100	98.933	ENSGACG00000008504	prpf8	100	98.718	Gasterosteus_aculeatus
ENSXMAG00000008505	prpf8	100	97.523	ENSGAGG00000008350	PRPF8	100	97.523	Gopherus_agassizii
ENSXMAG00000008505	prpf8	100	97.523	ENSGGOG00000005516	PRPF8	100	97.523	Gorilla_gorilla
ENSXMAG00000008505	prpf8	100	98.505	ENSHBUG00000016192	prpf8	100	98.505	Haplochromis_burtoni
ENSXMAG00000008505	prpf8	100	97.523	ENSHGLG00000012029	PRPF8	100	97.523	Heterocephalus_glaber_female
ENSXMAG00000008505	prpf8	100	97.523	ENSHGLG00100016494	PRPF8	100	97.523	Heterocephalus_glaber_male
ENSXMAG00000008505	prpf8	100	98.762	ENSHCOG00000016414	prpf8	100	98.762	Hippocampus_comes
ENSXMAG00000008505	prpf8	100	98.462	ENSIPUG00000023230	prpf8	100	98.462	Ictalurus_punctatus
ENSXMAG00000008505	prpf8	100	97.523	ENSSTOG00000005128	PRPF8	100	97.523	Ictidomys_tridecemlineatus
ENSXMAG00000008505	prpf8	100	95.389	ENSJJAG00000021159	Prpf8	100	95.389	Jaculus_jaculus
ENSXMAG00000008505	prpf8	99	98.717	ENSKMAG00000016118	prpf8	99	98.717	Kryptolebias_marmoratus
ENSXMAG00000008505	prpf8	100	98.804	ENSLBEG00000026903	prpf8	100	98.804	Labrus_bergylta
ENSXMAG00000008505	prpf8	95	95.498	ENSLACG00000010479	PRPF8	99	98.309	Latimeria_chalumnae
ENSXMAG00000008505	prpf8	99	98.207	ENSLOCG00000005409	prpf8	99	98.207	Lepisosteus_oculatus
ENSXMAG00000008505	prpf8	100	97.523	ENSLAFG00000015445	PRPF8	100	97.523	Loxodonta_africana
ENSXMAG00000008505	prpf8	100	97.523	ENSMFAG00000039995	PRPF8	100	97.523	Macaca_fascicularis
ENSXMAG00000008505	prpf8	100	97.523	ENSMMUG00000004820	PRPF8	100	97.523	Macaca_mulatta
ENSXMAG00000008505	prpf8	100	97.523	ENSMNEG00000035713	PRPF8	100	97.523	Macaca_nemestrina
ENSXMAG00000008505	prpf8	100	97.523	ENSMLEG00000037937	PRPF8	100	97.523	Mandrillus_leucophaeus
ENSXMAG00000008505	prpf8	100	98.932	ENSMAMG00000008919	prpf8	100	98.932	Mastacembelus_armatus
ENSXMAG00000008505	prpf8	100	98.426	ENSMZEG00005015073	prpf8	100	98.426	Maylandia_zebra
ENSXMAG00000008505	prpf8	100	97.566	ENSMGAG00000004769	PRPF8	100	97.566	Meleagris_gallopavo
ENSXMAG00000008505	prpf8	100	97.523	ENSMICG00000010320	PRPF8	100	97.523	Microcebus_murinus
ENSXMAG00000008505	prpf8	100	97.523	ENSMOCG00000016838	Prpf8	100	97.523	Microtus_ochrogaster
ENSXMAG00000008505	prpf8	100	98.334	ENSMMOG00000011887	prpf8	100	98.334	Mola_mola
ENSXMAG00000008505	prpf8	100	97.523	ENSMODG00000010480	PRPF8	100	97.523	Monodelphis_domestica
ENSXMAG00000008505	prpf8	97	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSXMAG00000008505	prpf8	100	97.481	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.481	Mus_caroli
ENSXMAG00000008505	prpf8	100	97.481	ENSMUSG00000020850	Prpf8	100	97.481	Mus_musculus
ENSXMAG00000008505	prpf8	100	97.438	MGP_PahariEiJ_G0017877	Prpf8	100	97.438	Mus_pahari
ENSXMAG00000008505	prpf8	100	97.481	MGP_SPRETEiJ_G0017583	Prpf8	100	97.481	Mus_spretus
ENSXMAG00000008505	prpf8	100	97.523	ENSMPUG00000013227	PRPF8	100	97.523	Mustela_putorius_furo
ENSXMAG00000008505	prpf8	100	97.399	ENSMLUG00000002666	PRPF8	100	97.399	Myotis_lucifugus
ENSXMAG00000008505	prpf8	100	95.773	ENSNGAG00000005305	Prpf8	100	95.773	Nannospalax_galili
ENSXMAG00000008505	prpf8	100	98.468	ENSNBRG00000013127	prpf8	100	98.468	Neolamprologus_brichardi
ENSXMAG00000008505	prpf8	97	96.694	ENSNLEG00000000897	PRPF8	98	96.694	Nomascus_leucogenys
ENSXMAG00000008505	prpf8	98	96.262	ENSMEUG00000015999	PRPF8	100	96.262	Notamacropus_eugenii
ENSXMAG00000008505	prpf8	100	96.029	ENSOPRG00000003102	PRPF8	100	95.942	Ochotona_princeps
ENSXMAG00000008505	prpf8	100	97.523	ENSODEG00000008468	PRPF8	100	97.523	Octodon_degus
ENSXMAG00000008505	prpf8	100	98.468	ENSONIG00000008153	prpf8	100	98.468	Oreochromis_niloticus
ENSXMAG00000008505	prpf8	82	99.159	ENSOANG00000004250	PRPF8	97	99.159	Ornithorhynchus_anatinus
ENSXMAG00000008505	prpf8	100	97.523	ENSOCUG00000000081	PRPF8	100	97.523	Oryctolagus_cuniculus
ENSXMAG00000008505	prpf8	100	98.428	ENSORLG00000008036	prpf8	100	98.471	Oryzias_latipes
ENSXMAG00000008505	prpf8	100	98.386	ENSORLG00020021070	prpf8	100	98.429	Oryzias_latipes_hni
ENSXMAG00000008505	prpf8	100	98.471	ENSORLG00015002340	prpf8	100	98.471	Oryzias_latipes_hsok
ENSXMAG00000008505	prpf8	100	96.899	ENSOMEG00000016866	prpf8	100	96.899	Oryzias_melastigma
ENSXMAG00000008505	prpf8	100	97.399	ENSOARG00000013312	PRPF8	100	97.399	Ovis_aries
ENSXMAG00000008505	prpf8	100	97.523	ENSPPAG00000042753	PRPF8	100	97.523	Pan_paniscus
ENSXMAG00000008505	prpf8	100	97.523	ENSPPRG00000008746	PRPF8	100	97.523	Panthera_pardus
ENSXMAG00000008505	prpf8	100	97.438	ENSPTIG00000019200	PRPF8	100	97.438	Panthera_tigris_altaica
ENSXMAG00000008505	prpf8	100	97.523	ENSPTRG00000039576	PRPF8	100	97.523	Pan_troglodytes
ENSXMAG00000008505	prpf8	98	98.089	ENSPANG00000024607	PRPF8	98	98.089	Papio_anubis
ENSXMAG00000008505	prpf8	100	98.423	ENSPKIG00000011201	prpf8	100	98.423	Paramormyrops_kingsleyae
ENSXMAG00000008505	prpf8	100	97.438	ENSPSIG00000013393	PRPF8	100	97.438	Pelodiscus_sinensis
ENSXMAG00000008505	prpf8	100	97.523	ENSPEMG00000021699	Prpf8	100	97.523	Peromyscus_maniculatus_bairdii
ENSXMAG00000008505	prpf8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSXMAG00000008505	prpf8	100	97.523	ENSPCIG00000022603	PRPF8	100	98.037	Phascolarctos_cinereus
ENSXMAG00000008505	prpf8	100	99.109	ENSPFOG00000007005	prpf8	100	99.067	Poecilia_formosa
ENSXMAG00000008505	prpf8	100	97.950	ENSPLAG00000020777	prpf8	100	97.950	Poecilia_latipinna
ENSXMAG00000008505	prpf8	100	99.109	ENSPMEG00000004051	prpf8	100	99.067	Poecilia_mexicana
ENSXMAG00000008505	prpf8	100	99.445	ENSPREG00000021902	prpf8	100	99.445	Poecilia_reticulata
ENSXMAG00000008505	prpf8	100	97.523	ENSPPYG00000007777	PRPF8	100	97.523	Pongo_abelii
ENSXMAG00000008505	prpf8	90	96.040	ENSPCAG00000008938	PRPF8	90	96.040	Procavia_capensis
ENSXMAG00000008505	prpf8	100	97.523	ENSPCOG00000015182	PRPF8	100	97.523	Propithecus_coquereli
ENSXMAG00000008505	prpf8	93	98.614	ENSPVAG00000002134	PRPF8	93	98.614	Pteropus_vampyrus
ENSXMAG00000008505	prpf8	100	98.505	ENSPNYG00000016356	prpf8	100	98.505	Pundamilia_nyererei
ENSXMAG00000008505	prpf8	100	98.633	ENSPNAG00000009247	prpf8	100	98.633	Pygocentrus_nattereri
ENSXMAG00000008505	prpf8	100	97.481	ENSRNOG00000003495	Prpf8	100	97.481	Rattus_norvegicus
ENSXMAG00000008505	prpf8	100	97.523	ENSRBIG00000031219	PRPF8	100	97.590	Rhinopithecus_bieti
ENSXMAG00000008505	prpf8	100	97.523	ENSRROG00000038014	PRPF8	100	97.590	Rhinopithecus_roxellana
ENSXMAG00000008505	prpf8	98	62.473	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSXMAG00000008505	prpf8	100	97.523	ENSSBOG00000029717	PRPF8	100	97.523	Saimiri_boliviensis_boliviensis
ENSXMAG00000008505	prpf8	100	97.481	ENSSHAG00000006167	PRPF8	100	97.481	Sarcophilus_harrisii
ENSXMAG00000008505	prpf8	100	98.463	ENSSFOG00015013905	prpf8	100	98.463	Scleropages_formosus
ENSXMAG00000008505	prpf8	100	98.718	ENSSMAG00000017736	prpf8	100	98.718	Scophthalmus_maximus
ENSXMAG00000008505	prpf8	100	99.018	ENSSDUG00000003029	prpf8	100	99.018	Seriola_dumerili
ENSXMAG00000008505	prpf8	68	99.625	ENSSLDG00000017096	prpf8	100	99.625	Seriola_lalandi_dorsalis
ENSXMAG00000008505	prpf8	87	94.263	ENSSARG00000002892	PRPF8	87	94.263	Sorex_araneus
ENSXMAG00000008505	prpf8	100	97.608	ENSSPUG00000007463	PRPF8	100	97.608	Sphenodon_punctatus
ENSXMAG00000008505	prpf8	100	98.334	ENSSPAG00000015639	prpf8	100	98.334	Stegastes_partitus
ENSXMAG00000008505	prpf8	100	97.523	ENSSSCG00000017817	PRPF8	100	97.523	Sus_scrofa
ENSXMAG00000008505	prpf8	52	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSXMAG00000008505	prpf8	100	97.566	ENSTGUG00000005648	-	100	97.566	Taeniopygia_guttata
ENSXMAG00000008505	prpf8	100	98.377	ENSTRUG00000015906	prpf8	100	98.377	Takifugu_rubripes
ENSXMAG00000008505	prpf8	95	99.403	ENSTNIG00000003460	prpf8	99	99.403	Tetraodon_nigroviridis
ENSXMAG00000008505	prpf8	93	98.979	ENSTBEG00000006431	PRPF8	93	98.979	Tupaia_belangeri
ENSXMAG00000008505	prpf8	100	96.926	ENSTTRG00000006869	PRPF8	100	96.926	Tursiops_truncatus
ENSXMAG00000008505	prpf8	54	96.445	ENSUAMG00000015644	-	96	96.445	Ursus_americanus
ENSXMAG00000008505	prpf8	100	97.267	ENSUMAG00000009385	PRPF8	100	97.267	Ursus_maritimus
ENSXMAG00000008505	prpf8	71	97.931	ENSVPAG00000006063	-	71	97.931	Vicugna_pacos
ENSXMAG00000008505	prpf8	100	97.523	ENSVVUG00000021695	PRPF8	99	97.523	Vulpes_vulpes
ENSXMAG00000008505	prpf8	100	97.353	ENSXETG00000022259	prpf8	100	97.353	Xenopus_tropicalis
ENSXMAG00000008505	prpf8	100	99.957	ENSXCOG00000012775	prpf8	100	99.957	Xiphophorus_couchianus