EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000008525 (Gene tree)
Gene ID
102232782
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
18399 bases
Position
chr1:25093568-25111966
Accession
102232782
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000028904YTHPF04146.156.5e-4111
ENSXMAP00000008540YTHPF04146.156.9e-4111
ENSXMAP00000029935YTHPF04146.157.1e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000008553-3368XM_023338580ENSXMAP00000008540605 (aa)XP_023194348M4A246
ENSXMAT00000035389-1713-ENSXMAP00000029935570 (aa)--
ENSXMAT00000029659-3568XM_023338586ENSXMAP00000028904558 (aa)XP_023194354UPI000C6E2772
Gene Model
Click here to download ENSXMAG00000008525's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008525's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000008525ythdf19473.481ENSG00000149658YTHDF19672.727Homo_sapiens
ENSXMAG00000008525ythdf19976.490ENSAPOG00000010796YTHDF19680.680Acanthochromis_polyacanthus
ENSXMAG00000008525ythdf19988.616ENSAPOG00000004358ythdf110090.000Acanthochromis_polyacanthus
ENSXMAG00000008525ythdf19472.356ENSAMEG00000017323YTHDF19572.943Ailuropoda_melanoleuca
ENSXMAG00000008525ythdf19484.124ENSACIG00000011264ythdf19786.809Amphilophus_citrinellus
ENSXMAG00000008525ythdf19480.074ENSACIG00000020083YTHDF19681.239Amphilophus_citrinellus
ENSXMAG00000008525ythdf19976.329ENSAOCG00000012567YTHDF19976.973Amphiprion_ocellaris
ENSXMAG00000008525ythdf19988.947ENSAOCG00000022251ythdf110090.307Amphiprion_ocellaris
ENSXMAG00000008525ythdf19976.490ENSAPEG00000008750YTHDF19680.146Amphiprion_percula
ENSXMAG00000008525ythdf19988.947ENSAPEG00000021878ythdf110090.307Amphiprion_percula
ENSXMAG00000008525ythdf19988.869ENSATEG00000023840ythdf110088.312Anabas_testudineus
ENSXMAG00000008525ythdf19976.244ENSATEG00000005996YTHDF19681.273Anabas_testudineus
ENSXMAG00000008525ythdf19473.529ENSAPLG00000005985YTHDF19673.091Anas_platyrhynchos
ENSXMAG00000008525ythdf19772.727ENSACAG00000005560YTHDF19971.379Anolis_carolinensis
ENSXMAG00000008525ythdf19661.679ENSANAG00000021022-9958.944Aotus_nancymaae
ENSXMAG00000008525ythdf19473.333ENSANAG00000034786-9871.899Aotus_nancymaae
ENSXMAG00000008525ythdf19976.763ENSACLG00000025518YTHDF19977.258Astatotilapia_calliptera
ENSXMAG00000008525ythdf19471.881ENSBTAG00000010383YTHDF19870.270Bos_taurus
ENSXMAG00000008525ythdf19473.383ENSCJAG00000010056YTHDF19672.545Callithrix_jacchus
ENSXMAG00000008525ythdf18872.638ENSCAFG00000012772YTHDF19872.568Canis_familiaris
ENSXMAG00000008525ythdf18872.638ENSCAFG00020001214YTHDF19872.568Canis_lupus_dingo
ENSXMAG00000008525ythdf19471.062ENSCHIG00000026494YTHDF19968.644Capra_hircus
ENSXMAG00000008525ythdf19473.333ENSTSYG00000033436YTHDF19673.540Carlito_syrichta
ENSXMAG00000008525ythdf19672.232ENSCAPG00000002544YTHDF19271.869Cavia_aperea
ENSXMAG00000008525ythdf19472.222ENSCPOG00000010202YTHDF19671.898Cavia_porcellus
ENSXMAG00000008525ythdf19771.763ENSCCAG00000024650YTHDF19672.202Cebus_capucinus
ENSXMAG00000008525ythdf19473.752ENSCATG00000033272YTHDF19672.860Cercocebus_atys
ENSXMAG00000008525ythdf19871.002ENSCLAG00000005989YTHDF19772.495Chinchilla_lanigera
ENSXMAG00000008525ythdf19473.752ENSCSAG00000016266YTHDF19672.860Chlorocebus_sabaeus
ENSXMAG00000008525ythdf19772.598ENSCPBG00000027183YTHDF19971.705Chrysemys_picta_bellii
ENSXMAG00000008525ythdf19473.567ENSCANG00000029082YTHDF19572.678Colobus_angolensis_palliatus
ENSXMAG00000008525ythdf19673.091ENSCGRG00001016568Ythdf19672.628Cricetulus_griseus_chok1gshd
ENSXMAG00000008525ythdf19473.333ENSCGRG00000009207Ythdf19772.628Cricetulus_griseus_crigri
ENSXMAG00000008525ythdf19485.370ENSCSEG00000020623YTHDF19887.027Cynoglossus_semilaevis
ENSXMAG00000008525ythdf19976.883ENSCVAG00000014378YTHDF19979.107Cyprinodon_variegatus
ENSXMAG00000008525ythdf110092.195ENSCVAG00000017940ythdf110092.195Cyprinodon_variegatus
ENSXMAG00000008525ythdf19979.823ENSDARG00000016447ythdf19979.675Danio_rerio
ENSXMAG00000008525ythdf19472.192ENSDNOG00000043590YTHDF19672.810Dasypus_novemcinctus
ENSXMAG00000008525ythdf19570.879ENSDORG00000002879Ythdf19371.248Dipodomys_ordii
ENSXMAG00000008525ythdf17958.503ENSETEG00000017860-9858.503Echinops_telfairi
ENSXMAG00000008525ythdf19673.636ENSEASG00005023186YTHDF19672.395Equus_asinus_asinus
ENSXMAG00000008525ythdf19573.993ENSECAG00000019475YTHDF19872.179Equus_caballus
ENSXMAG00000008525ythdf19470.968ENSEEUG00000007461YTHDF19871.731Erinaceus_europaeus
ENSXMAG00000008525ythdf19971.605ENSELUG00000001906YTHDF19877.778Esox_lucius
ENSXMAG00000008525ythdf19983.225ENSELUG00000022768ythdf19984.853Esox_lucius
ENSXMAG00000008525ythdf19472.336ENSFCAG00000008917YTHDF19672.578Felis_catus
ENSXMAG00000008525ythdf19771.986ENSFALG00000010463YTHDF19970.928Ficedula_albicollis
ENSXMAG00000008525ythdf19772.152ENSFDAG00000019602YTHDF110068.624Fukomys_damarensis
ENSXMAG00000008525ythdf19977.217ENSFHEG00000002540YTHDF19980.360Fundulus_heteroclitus
ENSXMAG00000008525ythdf110095.277ENSFHEG00000023218ythdf110095.277Fundulus_heteroclitus
ENSXMAG00000008525ythdf15281.073ENSGMOG00000019610ythdf19979.836Gadus_morhua
ENSXMAG00000008525ythdf19771.886ENSGALG00000005745YTHDF19971.479Gallus_gallus
ENSXMAG00000008525ythdf19976.265ENSGAFG00000021100YTHDF19879.492Gambusia_affinis
ENSXMAG00000008525ythdf19678.445ENSGACG00000002613YTHDF110076.936Gasterosteus_aculeatus
ENSXMAG00000008525ythdf19988.151ENSGACG00000012014ythdf19987.624Gasterosteus_aculeatus
ENSXMAG00000008525ythdf19772.064ENSGAGG00000003007YTHDF19971.504Gopherus_agassizii
ENSXMAG00000008525ythdf19673.285ENSGGOG00000008340YTHDF19672.727Gorilla_gorilla
ENSXMAG00000008525ythdf19976.603ENSHBUG00000004875YTHDF19977.097Haplochromis_burtoni
ENSXMAG00000008525ythdf19990.445ENSHBUG00000011284ythdf19790.774Haplochromis_burtoni
ENSXMAG00000008525ythdf19472.862ENSHGLG00000006585YTHDF19672.232Heterocephalus_glaber_female
ENSXMAG00000008525ythdf19472.862ENSHGLG00100004683YTHDF19672.232Heterocephalus_glaber_male
ENSXMAG00000008525ythdf19784.950ENSHCOG00000008866ythdf19984.783Hippocampus_comes
ENSXMAG00000008525ythdf19974.637ENSHCOG00000011303YTHDF19878.302Hippocampus_comes
ENSXMAG00000008525ythdf19979.115ENSIPUG00000000425Ythdf19978.084Ictalurus_punctatus
ENSXMAG00000008525ythdf19473.284ENSSTOG00000023001YTHDF19773.091Ictidomys_tridecemlineatus
ENSXMAG00000008525ythdf19673.370ENSJJAG00000013589Ythdf19772.445Jaculus_jaculus
ENSXMAG00000008525ythdf19991.800ENSKMAG00000005595ythdf110090.820Kryptolebias_marmoratus
ENSXMAG00000008525ythdf19976.861ENSKMAG00000017472YTHDF19980.581Kryptolebias_marmoratus
ENSXMAG00000008525ythdf19976.129ENSLBEG00000012068YTHDF19976.688Labrus_bergylta
ENSXMAG00000008525ythdf110088.274ENSLBEG00000014105ythdf110088.274Labrus_bergylta
ENSXMAG00000008525ythdf19671.993ENSLACG00000014195YTHDF19872.352Latimeria_chalumnae
ENSXMAG00000008525ythdf19975.482ENSLOCG00000005020ythdf19972.594Lepisosteus_oculatus
ENSXMAG00000008525ythdf19573.346ENSLAFG00000008884YTHDF19672.761Loxodonta_africana
ENSXMAG00000008525ythdf19473.752ENSMFAG00000042868YTHDF19672.860Macaca_fascicularis
ENSXMAG00000008525ythdf19673.551ENSMMUG00000009227YTHDF19672.860Macaca_mulatta
ENSXMAG00000008525ythdf19473.752ENSMNEG00000030851YTHDF19672.860Macaca_nemestrina
ENSXMAG00000008525ythdf19673.770ENSMLEG00000009252YTHDF19772.860Mandrillus_leucophaeus
ENSXMAG00000008525ythdf19580.037ENSMAMG00000011072YTHDF19680.616Mastacembelus_armatus
ENSXMAG00000008525ythdf110087.296ENSMAMG00000024255ythdf110088.907Mastacembelus_armatus
ENSXMAG00000008525ythdf110090.507ENSMZEG00005026397ythdf110090.835Maylandia_zebra
ENSXMAG00000008525ythdf19976.603ENSMZEG00005023596YTHDF19977.097Maylandia_zebra
ENSXMAG00000008525ythdf19473.346ENSMGAG00000006139YTHDF19672.909Meleagris_gallopavo
ENSXMAG00000008525ythdf19673.224ENSMAUG00000017660Ythdf19772.495Mesocricetus_auratus
ENSXMAG00000008525ythdf19473.333ENSMICG00000032266YTHDF19672.212Microcebus_murinus
ENSXMAG00000008525ythdf19473.284ENSMOCG00000013573Ythdf19672.395Microtus_ochrogaster
ENSXMAG00000008525ythdf19486.716ENSMMOG00000017500ythdf19785.620Mola_mola
ENSXMAG00000008525ythdf19976.140ENSMMOG00000020467YTHDF19974.363Mola_mola
ENSXMAG00000008525ythdf19371.756ENSMODG00000016842YTHDF19873.308Monodelphis_domestica
ENSXMAG00000008525ythdf19975.527ENSMALG00000022209YTHDF19678.881Monopterus_albus
ENSXMAG00000008525ythdf110087.903ENSMALG00000015672ythdf110085.990Monopterus_albus
ENSXMAG00000008525ythdf19672.302MGP_CAROLIEiJ_G0024790Ythdf19672.628Mus_caroli
ENSXMAG00000008525ythdf19772.143ENSMUSG00000038848Ythdf19672.628Mus_musculus
ENSXMAG00000008525ythdf19771.735MGP_PahariEiJ_G0026237Ythdf19672.628Mus_pahari
ENSXMAG00000008525ythdf19772.143MGP_SPRETEiJ_G0025715Ythdf19672.628Mus_spretus
ENSXMAG00000008525ythdf19368.199ENSMPUG00000008111YTHDF19870.370Mustela_putorius_furo
ENSXMAG00000008525ythdf19474.259ENSMLUG00000002241YTHDF19573.309Myotis_lucifugus
ENSXMAG00000008525ythdf19473.985ENSNGAG00000000334Ythdf110069.076Nannospalax_galili
ENSXMAG00000008525ythdf19589.384ENSNBRG00000008213ythdf19889.765Neolamprologus_brichardi
ENSXMAG00000008525ythdf19479.888ENSNBRG00000015321YTHDF19977.446Neolamprologus_brichardi
ENSXMAG00000008525ythdf19468.343ENSOPRG00000001758-9967.412Ochotona_princeps
ENSXMAG00000008525ythdf19459.853ENSODEG00000000074-10056.406Octodon_degus
ENSXMAG00000008525ythdf19671.275ENSODEG00000004380-9672.080Octodon_degus
ENSXMAG00000008525ythdf19989.876ENSONIG00000016799ythdf19990.586Oreochromis_niloticus
ENSXMAG00000008525ythdf19474.122ENSOANG00000003723YTHDF110069.697Ornithorhynchus_anatinus
ENSXMAG00000008525ythdf19976.013ENSORLG00000009739YTHDF19978.966Oryzias_latipes
ENSXMAG00000008525ythdf110088.072ENSORLG00000014665YTHDF110087.418Oryzias_latipes
ENSXMAG00000008525ythdf19976.013ENSORLG00020001332YTHDF19979.713Oryzias_latipes_hni
ENSXMAG00000008525ythdf110088.543ENSORLG00020000307ythdf110087.889Oryzias_latipes_hni
ENSXMAG00000008525ythdf19975.689ENSORLG00015018321YTHDF19978.610Oryzias_latipes_hsok
ENSXMAG00000008525ythdf110088.380ENSORLG00015006302ythdf110087.725Oryzias_latipes_hsok
ENSXMAG00000008525ythdf19976.823ENSOMEG00000011843YTHDF19976.861Oryzias_melastigma
ENSXMAG00000008525ythdf110090.148ENSOMEG00000002941YTHDF110089.327Oryzias_melastigma
ENSXMAG00000008525ythdf19472.222ENSOGAG00000000480YTHDF110068.729Otolemur_garnettii
ENSXMAG00000008525ythdf19469.907ENSOARG00000011639YTHDF18882.524Ovis_aries
ENSXMAG00000008525ythdf19673.285ENSPPAG00000023277YTHDF19772.727Pan_paniscus
ENSXMAG00000008525ythdf19472.575ENSPPRG00000020805YTHDF19673.126Panthera_pardus
ENSXMAG00000008525ythdf18178.924ENSPTIG00000017355YTHDF19277.311Panthera_tigris_altaica
ENSXMAG00000008525ythdf19673.285ENSPTRG00000013730YTHDF19672.727Pan_troglodytes
ENSXMAG00000008525ythdf19473.752ENSPANG00000021472YTHDF19672.860Papio_anubis
ENSXMAG00000008525ythdf19872.906ENSPKIG00000005427ythdf110070.017Paramormyrops_kingsleyae
ENSXMAG00000008525ythdf19874.120ENSPKIG00000005026YTHDF19873.415Paramormyrops_kingsleyae
ENSXMAG00000008525ythdf19673.866ENSPSIG00000005529YTHDF19672.777Pelodiscus_sinensis
ENSXMAG00000008525ythdf19486.932ENSPMGG00000015328ythdf19786.572Periophthalmus_magnuspinnatus
ENSXMAG00000008525ythdf19479.143ENSPMGG00000009101YTHDF19979.203Periophthalmus_magnuspinnatus
ENSXMAG00000008525ythdf19673.175ENSPEMG00000020199Ythdf19972.445Peromyscus_maniculatus_bairdii
ENSXMAG00000008525ythdf19673.732ENSPCIG00000017170YTHDF19873.501Phascolarctos_cinereus
ENSXMAG00000008525ythdf110098.020ENSPFOG00000005405ythdf110098.020Poecilia_formosa
ENSXMAG00000008525ythdf110098.020ENSPLAG00000006653ythdf110098.020Poecilia_latipinna
ENSXMAG00000008525ythdf19976.265ENSPLAG00000006298YTHDF19976.973Poecilia_latipinna
ENSXMAG00000008525ythdf19976.265ENSPMEG00000020969-9976.973Poecilia_mexicana
ENSXMAG00000008525ythdf110098.353ENSPMEG00000023753ythdf110098.353Poecilia_mexicana
ENSXMAG00000008525ythdf110098.515ENSPREG00000002173ythdf110098.515Poecilia_reticulata
ENSXMAG00000008525ythdf19976.049ENSPREG00000017662YTHDF19876.833Poecilia_reticulata
ENSXMAG00000008525ythdf18585.787ENSPPYG00000011226YTHDF19887.879Pongo_abelii
ENSXMAG00000008525ythdf19468.893ENSPCAG00000002452YTHDF110069.923Procavia_capensis
ENSXMAG00000008525ythdf19473.519ENSPCOG00000025969YTHDF19672.578Propithecus_coquereli
ENSXMAG00000008525ythdf19667.949ENSPVAG00000017568YTHDF19767.818Pteropus_vampyrus
ENSXMAG00000008525ythdf19976.603ENSPNYG00000002266YTHDF19977.097Pundamilia_nyererei
ENSXMAG00000008525ythdf19990.445ENSPNYG00000014007ythdf19890.553Pundamilia_nyererei
ENSXMAG00000008525ythdf19981.172ENSPNAG00000012447ythdf19980.914Pygocentrus_nattereri
ENSXMAG00000008525ythdf19473.148ENSRNOG00000027015Ythdf19672.810Rattus_norvegicus
ENSXMAG00000008525ythdf19473.013ENSRBIG00000044959YTHDF19672.212Rhinopithecus_bieti
ENSXMAG00000008525ythdf19473.013ENSRROG00000033014YTHDF19672.212Rhinopithecus_roxellana
ENSXMAG00000008525ythdf19571.978ENSSBOG00000027278YTHDF19870.793Saimiri_boliviensis_boliviensis
ENSXMAG00000008525ythdf19473.704ENSSHAG00000010430YTHDF18574.182Sarcophilus_harrisii
ENSXMAG00000008525ythdf19975.499ENSSFOG00015000284ythdf19975.041Scleropages_formosus
ENSXMAG00000008525ythdf17692.941ENSSMAG00000013715ythdf19589.781Scophthalmus_maximus
ENSXMAG00000008525ythdf19977.658ENSSMAG00000007635YTHDF19776.645Scophthalmus_maximus
ENSXMAG00000008525ythdf19989.279ENSSDUG00000000435ythdf110087.884Seriola_dumerili
ENSXMAG00000008525ythdf19480.935ENSSDUG00000015823YTHDF19680.439Seriola_dumerili
ENSXMAG00000008525ythdf19989.046ENSSLDG00000024948ythdf19987.662Seriola_lalandi_dorsalis
ENSXMAG00000008525ythdf19974.684ENSSLDG00000001054YTHDF19493.229Seriola_lalandi_dorsalis
ENSXMAG00000008525ythdf19371.810ENSSPUG00000015143YTHDF19872.763Sphenodon_punctatus
ENSXMAG00000008525ythdf19976.527ENSSPAG00000003666YTHDF19976.527Stegastes_partitus
ENSXMAG00000008525ythdf19989.547ENSSPAG00000014989ythdf110090.209Stegastes_partitus
ENSXMAG00000008525ythdf19471.933ENSSSCG00000040086YTHDF110067.731Sus_scrofa
ENSXMAG00000008525ythdf19473.297ENSTGUG00000007565YTHDF19772.909Taeniopygia_guttata
ENSXMAG00000008525ythdf19576.728ENSTRUG00000005049YTHDF19976.190Takifugu_rubripes
ENSXMAG00000008525ythdf19587.158ENSTRUG00000004288ythdf19986.811Takifugu_rubripes
ENSXMAG00000008525ythdf19482.868ENSTNIG00000012490ythdf19981.145Tetraodon_nigroviridis
ENSXMAG00000008525ythdf19477.528ENSTNIG00000003975YTHDF19974.780Tetraodon_nigroviridis
ENSXMAG00000008525ythdf19572.212ENSTTRG00000001804YTHDF19671.795Tursiops_truncatus
ENSXMAG00000008525ythdf19572.477ENSUAMG00000011021YTHDF19872.374Ursus_americanus
ENSXMAG00000008525ythdf18871.429ENSUMAG00000022290YTHDF19872.179Ursus_maritimus
ENSXMAG00000008525ythdf18872.727ENSVVUG00000015275YTHDF19872.374Vulpes_vulpes
ENSXMAG00000008525ythdf19872.125ENSXETG00000027086ythdf19871.429Xenopus_tropicalis
ENSXMAG00000008525ythdf19699.091ENSXCOG00000002490ythdf19599.091Xiphophorus_couchianus
ENSXMAG00000008525ythdf19976.265ENSXCOG00000008115YTHDF19977.167Xiphophorus_couchianus
ENSXMAG00000008525ythdf19976.265ENSXMAG00000015644YTHDF19980.762Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us