EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000008832 (Gene tree)
Gene ID: 102221569
Gene Symbol: farsa
Alias: farsla|wu:fj21a11|zgc:136506|zgc:158185
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 8115 bases
Position: chr16:21627715-21635829
Accession: 102221569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000008866	tRNA-synt_2d	PF01409.20	1.5e-91	1	1
ENSXMAP00000028143	tRNA-synt_2d	PF01409.20	4.6e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000008880	-	1885	XM_005802792	ENSXMAP00000008866	497 (aa)	XP_005802849	M4A322
ENSXMAT00000031892	-	2359	-	ENSXMAP00000028143	463 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000008832's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000008832's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000008832	farsa	100	76.258	ENSG00000179115	FARSA	99	77.177	Homo_sapiens
ENSXMAG00000008832	farsa	100	90.342	ENSAPOG00000011465	farsa	100	90.342	Acanthochromis_polyacanthus
ENSXMAG00000008832	farsa	100	75.252	ENSAMEG00000012446	FARSA	98	75.252	Ailuropoda_melanoleuca
ENSXMAG00000008832	farsa	100	85.915	ENSACIG00000020499	farsa	100	85.915	Amphilophus_citrinellus
ENSXMAG00000008832	farsa	100	90.744	ENSAOCG00000000581	farsa	100	90.744	Amphiprion_ocellaris
ENSXMAG00000008832	farsa	100	90.543	ENSAPEG00000017695	farsa	100	90.543	Amphiprion_percula
ENSXMAG00000008832	farsa	100	77.371	ENSATEG00000012633	farsa	100	76.104	Anabas_testudineus
ENSXMAG00000008832	farsa	100	81.489	ENSATEG00000012807	farsa	100	81.489	Anabas_testudineus
ENSXMAG00000008832	farsa	99	76.411	ENSACAG00000017166	FARSA	84	76.411	Anolis_carolinensis
ENSXMAG00000008832	farsa	100	75.453	ENSANAG00000037420	FARSA	98	75.453	Aotus_nancymaae
ENSXMAG00000008832	farsa	100	91.549	ENSACLG00000001716	farsa	100	91.549	Astatotilapia_calliptera
ENSXMAG00000008832	farsa	100	85.312	ENSAMXG00000037912	farsa	100	85.312	Astyanax_mexicanus
ENSXMAG00000008832	farsa	100	74.849	ENSBTAG00000021374	FARSA	98	74.849	Bos_taurus
ENSXMAG00000008832	farsa	96	62.947	WBGene00001497	fars-1	94	62.947	Caenorhabditis_elegans
ENSXMAG00000008832	farsa	99	75.000	ENSCJAG00000004686	FARSA	98	71.429	Callithrix_jacchus
ENSXMAG00000008832	farsa	100	75.855	ENSCAFG00000017096	FARSA	98	75.855	Canis_familiaris
ENSXMAG00000008832	farsa	100	75.855	ENSCAFG00020005315	FARSA	98	75.855	Canis_lupus_dingo
ENSXMAG00000008832	farsa	100	71.142	ENSCHIG00000022617	FARSA	98	71.142	Capra_hircus
ENSXMAG00000008832	farsa	92	72.489	ENSTSYG00000002595	FARSA	83	72.489	Carlito_syrichta
ENSXMAG00000008832	farsa	90	75.893	ENSCAPG00000011353	FARSA	95	75.893	Cavia_aperea
ENSXMAG00000008832	farsa	100	74.849	ENSCPOG00000000787	FARSA	98	74.849	Cavia_porcellus
ENSXMAG00000008832	farsa	100	75.453	ENSCCAG00000028176	FARSA	98	75.453	Cebus_capucinus
ENSXMAG00000008832	farsa	99	74.798	ENSCLAG00000015489	FARSA	98	74.798	Chinchilla_lanigera
ENSXMAG00000008832	farsa	94	77.253	ENSCSAG00000006530	FARSA	98	77.253	Chlorocebus_sabaeus
ENSXMAG00000008832	farsa	96	80.585	ENSCPBG00000023915	FARSA	99	78.800	Chrysemys_picta_bellii
ENSXMAG00000008832	farsa	98	66.735	ENSCING00000002567	-	98	66.735	Ciona_intestinalis
ENSXMAG00000008832	farsa	99	67.606	ENSCSAVG00000010683	-	98	67.606	Ciona_savignyi
ENSXMAG00000008832	farsa	100	76.459	ENSCANG00000043649	-	98	76.459	Colobus_angolensis_palliatus
ENSXMAG00000008832	farsa	100	75.855	ENSCGRG00001019769	Farsa	98	75.855	Cricetulus_griseus_chok1gshd
ENSXMAG00000008832	farsa	100	75.855	ENSCGRG00000013415	Farsa	98	75.855	Cricetulus_griseus_crigri
ENSXMAG00000008832	farsa	100	88.934	ENSCSEG00000016214	farsa	96	88.934	Cynoglossus_semilaevis
ENSXMAG00000008832	farsa	100	92.958	ENSCVAG00000007907	farsa	100	92.958	Cyprinodon_variegatus
ENSXMAG00000008832	farsa	100	88.129	ENSDARG00000098825	farsa	100	88.129	Danio_rerio
ENSXMAG00000008832	farsa	96	76.471	ENSDNOG00000032350	FARSA	98	76.471	Dasypus_novemcinctus
ENSXMAG00000008832	farsa	99	75.202	ENSDORG00000010118	Farsa	98	75.202	Dipodomys_ordii
ENSXMAG00000008832	farsa	99	65.992	FBgn0030007	alpha-PheRS	99	65.992	Drosophila_melanogaster
ENSXMAG00000008832	farsa	100	68.612	ENSETEG00000018673	FARSA	98	68.612	Echinops_telfairi
ENSXMAG00000008832	farsa	64	66.554	ENSEBUG00000008545	farsa	99	66.554	Eptatretus_burgeri
ENSXMAG00000008832	farsa	100	64.906	ENSEASG00005004093	FARSA	95	64.906	Equus_asinus_asinus
ENSXMAG00000008832	farsa	100	75.252	ENSECAG00000015139	FARSA	93	75.252	Equus_caballus
ENSXMAG00000008832	farsa	100	86.922	ENSELUG00000010183	farsa	100	86.922	Esox_lucius
ENSXMAG00000008832	farsa	100	75.252	ENSFCAG00000023511	FARSA	98	75.252	Felis_catus
ENSXMAG00000008832	farsa	100	73.866	ENSFDAG00000005987	FARSA	98	74.798	Fukomys_damarensis
ENSXMAG00000008832	farsa	100	93.159	ENSFHEG00000009382	farsa	94	93.159	Fundulus_heteroclitus
ENSXMAG00000008832	farsa	100	84.739	ENSGMOG00000018319	farsa	100	84.739	Gadus_morhua
ENSXMAG00000008832	farsa	99	71.169	ENSGALG00000040258	FARSA	87	71.169	Gallus_gallus
ENSXMAG00000008832	farsa	100	98.704	ENSGAFG00000014146	farsa	100	98.390	Gambusia_affinis
ENSXMAG00000008832	farsa	100	88.793	ENSGACG00000006278	farsa	100	88.755	Gasterosteus_aculeatus
ENSXMAG00000008832	farsa	100	79.200	ENSGAGG00000000753	FARSA	99	79.200	Gopherus_agassizii
ENSXMAG00000008832	farsa	100	76.258	ENSGGOG00000003418	FARSA	98	76.258	Gorilla_gorilla
ENSXMAG00000008832	farsa	100	91.549	ENSHBUG00000019852	farsa	100	91.549	Haplochromis_burtoni
ENSXMAG00000008832	farsa	99	74.395	ENSHGLG00000005213	FARSA	98	74.395	Heterocephalus_glaber_female
ENSXMAG00000008832	farsa	99	74.597	ENSHGLG00100009586	FARSA	98	74.597	Heterocephalus_glaber_male
ENSXMAG00000008832	farsa	100	88.732	ENSHCOG00000019548	farsa	100	88.732	Hippocampus_comes
ENSXMAG00000008832	farsa	100	88.129	ENSIPUG00000007635	farsa	100	88.129	Ictalurus_punctatus
ENSXMAG00000008832	farsa	100	74.849	ENSSTOG00000008748	FARSA	98	74.849	Ictidomys_tridecemlineatus
ENSXMAG00000008832	farsa	100	89.738	ENSKMAG00000010698	farsa	100	89.738	Kryptolebias_marmoratus
ENSXMAG00000008832	farsa	92	89.176	ENSLBEG00000001258	farsa	97	89.176	Labrus_bergylta
ENSXMAG00000008832	farsa	100	89.940	ENSLBEG00000006757	-	100	89.940	Labrus_bergylta
ENSXMAG00000008832	farsa	100	83.801	ENSLOCG00000008389	farsa	96	83.801	Lepisosteus_oculatus
ENSXMAG00000008832	farsa	100	75.252	ENSLAFG00000016154	FARSA	98	75.252	Loxodonta_africana
ENSXMAG00000008832	farsa	100	76.258	ENSMFAG00000030595	FARSA	98	76.258	Macaca_fascicularis
ENSXMAG00000008832	farsa	100	76.258	ENSMMUG00000004390	FARSA	98	76.258	Macaca_mulatta
ENSXMAG00000008832	farsa	100	76.258	ENSMNEG00000043866	FARSA	98	76.258	Macaca_nemestrina
ENSXMAG00000008832	farsa	100	76.104	ENSMLEG00000029157	FARSA	98	76.104	Mandrillus_leucophaeus
ENSXMAG00000008832	farsa	100	88.732	ENSMAMG00000010636	farsa	100	88.732	Mastacembelus_armatus
ENSXMAG00000008832	farsa	100	91.549	ENSMZEG00005002319	farsa	100	91.549	Maylandia_zebra
ENSXMAG00000008832	farsa	100	76.459	ENSMAUG00000009188	Farsa	98	76.459	Mesocricetus_auratus
ENSXMAG00000008832	farsa	100	75.252	ENSMICG00000016272	FARSA	98	75.252	Microcebus_murinus
ENSXMAG00000008832	farsa	99	76.210	ENSMOCG00000011399	Farsa	98	76.210	Microtus_ochrogaster
ENSXMAG00000008832	farsa	100	85.915	ENSMMOG00000006287	farsa	100	85.915	Mola_mola
ENSXMAG00000008832	farsa	99	76.815	ENSMODG00000011519	FARSA	100	76.815	Monodelphis_domestica
ENSXMAG00000008832	farsa	100	85.312	ENSMALG00000001972	farsa	100	85.312	Monopterus_albus
ENSXMAG00000008832	farsa	99	76.210	MGP_CAROLIEiJ_G0031312	Farsa	98	76.210	Mus_caroli
ENSXMAG00000008832	farsa	99	76.210	ENSMUSG00000003808	Farsa	98	76.210	Mus_musculus
ENSXMAG00000008832	farsa	99	75.806	MGP_PahariEiJ_G0022917	Farsa	98	75.806	Mus_pahari
ENSXMAG00000008832	farsa	99	76.411	MGP_SPRETEiJ_G0032431	Farsa	98	76.411	Mus_spretus
ENSXMAG00000008832	farsa	100	76.459	ENSMPUG00000004400	FARSA	98	76.459	Mustela_putorius_furo
ENSXMAG00000008832	farsa	100	75.252	ENSMLUG00000012767	FARSA	98	75.252	Myotis_lucifugus
ENSXMAG00000008832	farsa	80	75.881	ENSNGAG00000018353	Farsa	100	75.881	Nannospalax_galili
ENSXMAG00000008832	farsa	100	90.946	ENSNBRG00000010063	farsa	100	90.946	Neolamprologus_brichardi
ENSXMAG00000008832	farsa	100	75.855	ENSNLEG00000012899	FARSA	98	75.855	Nomascus_leucogenys
ENSXMAG00000008832	farsa	100	76.861	ENSMEUG00000014253	FARSA	100	76.861	Notamacropus_eugenii
ENSXMAG00000008832	farsa	100	74.245	ENSOPRG00000005004	FARSA	98	74.245	Ochotona_princeps
ENSXMAG00000008832	farsa	99	75.403	ENSODEG00000010433	FARSA	98	75.403	Octodon_degus
ENSXMAG00000008832	farsa	100	91.549	ENSONIG00000008075	farsa	100	91.549	Oreochromis_niloticus
ENSXMAG00000008832	farsa	100	90.543	ENSORLG00000016406	farsa	90	90.543	Oryzias_latipes
ENSXMAG00000008832	farsa	100	90.744	ENSORLG00020021978	farsa	100	90.744	Oryzias_latipes_hni
ENSXMAG00000008832	farsa	100	90.342	ENSORLG00015015045	farsa	100	90.342	Oryzias_latipes_hsok
ENSXMAG00000008832	farsa	100	90.543	ENSOMEG00000017367	farsa	97	90.543	Oryzias_melastigma
ENSXMAG00000008832	farsa	100	75.654	ENSOGAG00000012243	FARSA	98	75.654	Otolemur_garnettii
ENSXMAG00000008832	farsa	100	75.050	ENSOARG00000009991	FARSA	92	75.050	Ovis_aries
ENSXMAG00000008832	farsa	100	76.056	ENSPPAG00000034266	FARSA	98	76.056	Pan_paniscus
ENSXMAG00000008832	farsa	100	75.252	ENSPPRG00000000346	FARSA	98	75.252	Panthera_pardus
ENSXMAG00000008832	farsa	92	76.906	ENSPTIG00000011502	FARSA	94	76.906	Panthera_tigris_altaica
ENSXMAG00000008832	farsa	100	76.056	ENSPTRG00000010550	FARSA	98	76.056	Pan_troglodytes
ENSXMAG00000008832	farsa	100	76.056	ENSPANG00000010978	FARSA	98	72.233	Papio_anubis
ENSXMAG00000008832	farsa	100	86.117	ENSPKIG00000007170	farsa	100	86.117	Paramormyrops_kingsleyae
ENSXMAG00000008832	farsa	90	75.000	ENSPSIG00000012701	FARSA	97	75.000	Pelodiscus_sinensis
ENSXMAG00000008832	farsa	100	82.897	ENSPMGG00000001401	farsa	100	82.897	Periophthalmus_magnuspinnatus
ENSXMAG00000008832	farsa	100	76.056	ENSPEMG00000012560	Farsa	98	76.056	Peromyscus_maniculatus_bairdii
ENSXMAG00000008832	farsa	100	77.465	ENSPMAG00000008453	farsa	100	77.465	Petromyzon_marinus
ENSXMAG00000008832	farsa	100	76.861	ENSPCIG00000019294	FARSA	100	76.861	Phascolarctos_cinereus
ENSXMAG00000008832	farsa	100	97.192	ENSPFOG00000001201	farsa	100	96.982	Poecilia_formosa
ENSXMAG00000008832	farsa	100	97.192	ENSPLAG00000018191	farsa	100	96.982	Poecilia_latipinna
ENSXMAG00000008832	farsa	100	97.408	ENSPMEG00000013547	farsa	100	97.183	Poecilia_mexicana
ENSXMAG00000008832	farsa	100	91.751	ENSPREG00000013620	farsa	100	91.751	Poecilia_reticulata
ENSXMAG00000008832	farsa	100	75.855	ENSPPYG00000009615	FARSA	98	75.855	Pongo_abelii
ENSXMAG00000008832	farsa	100	75.453	ENSPCAG00000015721	FARSA	98	75.453	Procavia_capensis
ENSXMAG00000008832	farsa	100	75.252	ENSPCOG00000014412	FARSA	98	75.252	Propithecus_coquereli
ENSXMAG00000008832	farsa	86	83.333	ENSPVAG00000014714	FARSA	84	83.333	Pteropus_vampyrus
ENSXMAG00000008832	farsa	100	91.549	ENSPNYG00000002144	farsa	100	91.549	Pundamilia_nyererei
ENSXMAG00000008832	farsa	100	86.318	ENSPNAG00000000869	farsa	100	86.318	Pygocentrus_nattereri
ENSXMAG00000008832	farsa	99	76.210	ENSRNOG00000003149	Farsa	98	76.210	Rattus_norvegicus
ENSXMAG00000008832	farsa	100	76.056	ENSRBIG00000025585	FARSA	98	76.056	Rhinopithecus_bieti
ENSXMAG00000008832	farsa	100	76.056	ENSRROG00000040046	FARSA	98	72.233	Rhinopithecus_roxellana
ENSXMAG00000008832	farsa	98	48.207	YFL022C	FRS2	98	48.207	Saccharomyces_cerevisiae
ENSXMAG00000008832	farsa	100	75.654	ENSSBOG00000031362	FARSA	98	75.654	Saimiri_boliviensis_boliviensis
ENSXMAG00000008832	farsa	90	77.405	ENSSHAG00000015006	FARSA	100	77.405	Sarcophilus_harrisii
ENSXMAG00000008832	farsa	100	82.696	ENSSFOG00015014864	farsa	100	82.696	Scleropages_formosus
ENSXMAG00000008832	farsa	100	89.135	ENSSMAG00000002358	farsa	100	89.135	Scophthalmus_maximus
ENSXMAG00000008832	farsa	100	89.940	ENSSDUG00000008631	farsa	100	89.940	Seriola_dumerili
ENSXMAG00000008832	farsa	100	89.738	ENSSLDG00000017108	farsa	100	89.738	Seriola_lalandi_dorsalis
ENSXMAG00000008832	farsa	67	91.176	ENSSARG00000006579	-	68	91.176	Sorex_araneus
ENSXMAG00000008832	farsa	96	68.834	ENSSPUG00000012509	FARSA	98	68.271	Sphenodon_punctatus
ENSXMAG00000008832	farsa	100	91.348	ENSSPAG00000018292	farsa	92	91.348	Stegastes_partitus
ENSXMAG00000008832	farsa	100	75.050	ENSSSCG00000013745	FARSA	98	75.050	Sus_scrofa
ENSXMAG00000008832	farsa	100	76.258	ENSTRUG00000010624	farsa	100	76.258	Takifugu_rubripes
ENSXMAG00000008832	farsa	100	80.885	ENSTNIG00000008330	farsa	100	80.885	Tetraodon_nigroviridis
ENSXMAG00000008832	farsa	90	73.661	ENSTBEG00000000396	FARSA	98	73.661	Tupaia_belangeri
ENSXMAG00000008832	farsa	87	88.235	ENSTTRG00000003599	FARSA	85	88.235	Tursiops_truncatus
ENSXMAG00000008832	farsa	100	75.453	ENSUAMG00000010230	FARSA	98	75.453	Ursus_americanus
ENSXMAG00000008832	farsa	100	75.453	ENSUMAG00000006110	FARSA	98	75.453	Ursus_maritimus
ENSXMAG00000008832	farsa	100	75.855	ENSVVUG00000024145	FARSA	98	75.855	Vulpes_vulpes
ENSXMAG00000008832	farsa	100	78.400	ENSXETG00000007936	farsa	100	78.400	Xenopus_tropicalis
ENSXMAG00000008832	farsa	100	89.960	ENSXCOG00000015512	farsa	100	89.960	Xiphophorus_couchianus