EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009020 (Gene tree)
Gene ID: 102225661
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 55048 bases
Position: chr8:9792746-9847793
Accession: 102225661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009068	DRY_EERY	PF09750.9	6.1e-32	1	1
ENSXMAP00000025241	DRY_EERY	PF09750.9	4.2e-14	1	1
ENSXMAP00000025241	Surp	PF01805.20	9.8e-29	1	2
ENSXMAP00000025241	Surp	PF01805.20	9.8e-29	2	2
ENSXMAP00000009068	Surp	PF01805.20	1.1e-28	1	2
ENSXMAP00000009068	Surp	PF01805.20	1.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000026411	-	3717	XM_005812155	ENSXMAP00000025241	886 (aa)	XP_005812212	UPI0003B4EA01
ENSXMAT00000009083	-	3700	XM_014473741	ENSXMAP00000009068	928 (aa)	XP_014329227	M4A3M4

Gene Model

Click here to download ENSXMAG00000009020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009020	sfswap	89	67.751	ENSG00000061936	SFSWAP	67	80.247	Homo_sapiens
ENSXMAG00000009020	sfswap	100	95.652	ENSAPOG00000005784	sfswap	93	95.652	Acanthochromis_polyacanthus
ENSXMAG00000009020	sfswap	99	51.320	ENSAMEG00000013818	SFSWAP	82	59.021	Ailuropoda_melanoleuca
ENSXMAG00000009020	sfswap	79	81.583	ENSAOCG00000016469	sfswap	77	81.497	Amphiprion_ocellaris
ENSXMAG00000009020	sfswap	79	81.583	ENSAPEG00000004965	sfswap	77	81.497	Amphiprion_percula
ENSXMAG00000009020	sfswap	79	79.784	ENSATEG00000021053	sfswap	97	73.347	Anabas_testudineus
ENSXMAG00000009020	sfswap	98	50.210	ENSACAG00000007220	SFSWAP	72	57.589	Anolis_carolinensis
ENSXMAG00000009020	sfswap	97	53.575	ENSANAG00000001518	SFSWAP	81	60.086	Aotus_nancymaae
ENSXMAG00000009020	sfswap	79	80.135	ENSACLG00000020159	sfswap	79	80.636	Astatotilapia_calliptera
ENSXMAG00000009020	sfswap	72	65.465	ENSAMXG00000008657	sfswap	72	65.922	Astyanax_mexicanus
ENSXMAG00000009020	sfswap	82	59.264	ENSBTAG00000000439	SFSWAP	80	60.369	Bos_taurus
ENSXMAG00000009020	sfswap	97	53.112	ENSCJAG00000003613	SFSWAP	74	60.029	Callithrix_jacchus
ENSXMAG00000009020	sfswap	97	54.162	ENSCAFG00000006625	SFSWAP	83	59.301	Canis_familiaris
ENSXMAG00000009020	sfswap	91	49.054	ENSCAFG00020011254	SFSWAP	71	53.253	Canis_lupus_dingo
ENSXMAG00000009020	sfswap	82	59.406	ENSCHIG00000008838	SFSWAP	80	60.369	Capra_hircus
ENSXMAG00000009020	sfswap	89	66.396	ENSTSYG00000010303	SFSWAP	85	58.546	Carlito_syrichta
ENSXMAG00000009020	sfswap	89	67.655	ENSCCAG00000037255	SFSWAP	81	59.742	Cebus_capucinus
ENSXMAG00000009020	sfswap	89	67.751	ENSCATG00000031094	SFSWAP	81	60.689	Cercocebus_atys
ENSXMAG00000009020	sfswap	79	66.352	ENSCHOG00000003578	SFSWAP	82	60.317	Choloepus_hoffmanni
ENSXMAG00000009020	sfswap	97	54.806	ENSCPBG00000024757	SFSWAP	78	59.915	Chrysemys_picta_bellii
ENSXMAG00000009020	sfswap	89	67.480	ENSCANG00000036501	SFSWAP	81	60.545	Colobus_angolensis_palliatus
ENSXMAG00000009020	sfswap	92	62.344	ENSCGRG00001011284	Sfswap	84	59.315	Cricetulus_griseus_chok1gshd
ENSXMAG00000009020	sfswap	78	75.000	ENSCSEG00000003773	sfswap	76	74.796	Cynoglossus_semilaevis
ENSXMAG00000009020	sfswap	50	84.821	ENSCVAG00000001205	-	97	80.670	Cyprinodon_variegatus
ENSXMAG00000009020	sfswap	72	69.417	ENSDARG00000005980	sfswap	73	68.661	Danio_rerio
ENSXMAG00000009020	sfswap	53	49.234	ENSDNOG00000018742	SFSWAP	80	61.370	Dasypus_novemcinctus
ENSXMAG00000009020	sfswap	97	48.497	ENSDORG00000010352	Sfswap	72	52.367	Dipodomys_ordii
ENSXMAG00000009020	sfswap	63	100.000	ENSETEG00000016657	-	59	100.000	Echinops_telfairi
ENSXMAG00000009020	sfswap	88	36.081	ENSEBUG00000016748	SFSWAP	64	45.091	Eptatretus_burgeri
ENSXMAG00000009020	sfswap	97	52.784	ENSEASG00005016502	SFSWAP	83	58.996	Equus_asinus_asinus
ENSXMAG00000009020	sfswap	97	50.441	ENSECAG00000007657	SFSWAP	83	58.996	Equus_caballus
ENSXMAG00000009020	sfswap	91	44.237	ENSEEUG00000001713	SFSWAP	71	49.584	Erinaceus_europaeus
ENSXMAG00000009020	sfswap	72	63.870	ENSELUG00000010942	sfswap	94	62.239	Esox_lucius
ENSXMAG00000009020	sfswap	97	52.621	ENSFCAG00000010778	SFSWAP	71	60.340	Felis_catus
ENSXMAG00000009020	sfswap	68	59.195	ENSFALG00000009577	SFSWAP	71	60.589	Ficedula_albicollis
ENSXMAG00000009020	sfswap	50	82.534	ENSGMOG00000009205	sfswap	52	83.562	Gadus_morhua
ENSXMAG00000009020	sfswap	100	96.663	ENSGAFG00000006272	sfswap	100	96.663	Gambusia_affinis
ENSXMAG00000009020	sfswap	84	68.360	ENSGACG00000017647	sfswap	92	65.136	Gasterosteus_aculeatus
ENSXMAG00000009020	sfswap	97	54.928	ENSGAGG00000002611	SFSWAP	81	59.607	Gopherus_agassizii
ENSXMAG00000009020	sfswap	89	67.568	ENSGGOG00000014877	SFSWAP	81	60.545	Gorilla_gorilla
ENSXMAG00000009020	sfswap	79	80.162	ENSHBUG00000005629	sfswap	75	80.663	Haplochromis_burtoni
ENSXMAG00000009020	sfswap	77	74.216	ENSHCOG00000009475	sfswap	77	73.469	Hippocampus_comes
ENSXMAG00000009020	sfswap	71	68.398	ENSIPUG00000010598	sfswap	74	68.376	Ictalurus_punctatus
ENSXMAG00000009020	sfswap	92	64.589	ENSSTOG00000000773	SFSWAP	71	60.663	Ictidomys_tridecemlineatus
ENSXMAG00000009020	sfswap	99	53.079	ENSJJAG00000006609	Sfswap	71	60.000	Jaculus_jaculus
ENSXMAG00000009020	sfswap	77	82.393	ENSKMAG00000013168	sfswap	75	82.669	Kryptolebias_marmoratus
ENSXMAG00000009020	sfswap	75	79.801	ENSLBEG00000010239	sfswap	78	78.663	Labrus_bergylta
ENSXMAG00000009020	sfswap	70	59.433	ENSLACG00000018678	SFSWAP	71	59.684	Latimeria_chalumnae
ENSXMAG00000009020	sfswap	100	57.419	ENSLOCG00000006202	sfswap	100	58.130	Lepisosteus_oculatus
ENSXMAG00000009020	sfswap	97	52.071	ENSMFAG00000037352	SFSWAP	81	60.832	Macaca_fascicularis
ENSXMAG00000009020	sfswap	98	53.846	ENSMMUG00000020343	SFSWAP	71	60.888	Macaca_mulatta
ENSXMAG00000009020	sfswap	98	53.846	ENSMNEG00000041002	SFSWAP	81	60.888	Macaca_nemestrina
ENSXMAG00000009020	sfswap	89	63.661	ENSMLEG00000035728	SFSWAP	80	58.357	Mandrillus_leucophaeus
ENSXMAG00000009020	sfswap	100	77.484	ENSMAMG00000006631	sfswap	100	77.167	Mastacembelus_armatus
ENSXMAG00000009020	sfswap	79	80.135	ENSMZEG00005017834	SFSWAP	76	80.636	Maylandia_zebra
ENSXMAG00000009020	sfswap	89	67.209	ENSMICG00000004465	SFSWAP	84	58.597	Microcebus_murinus
ENSXMAG00000009020	sfswap	89	67.209	ENSMOCG00000014390	Sfswap	71	60.745	Microtus_ochrogaster
ENSXMAG00000009020	sfswap	85	62.080	ENSMODG00000015581	SFSWAP	67	54.003	Monodelphis_domestica
ENSXMAG00000009020	sfswap	77	77.824	ENSMALG00000012603	sfswap	82	77.335	Monopterus_albus
ENSXMAG00000009020	sfswap	98	52.229	ENSMPUG00000002218	SFSWAP	74	60.335	Mustela_putorius_furo
ENSXMAG00000009020	sfswap	72	58.047	ENSMLUG00000011296	SFSWAP	77	59.414	Myotis_lucifugus
ENSXMAG00000009020	sfswap	99	52.000	ENSNGAG00000018167	Sfswap	71	60.571	Nannospalax_galili
ENSXMAG00000009020	sfswap	76	79.270	ENSNBRG00000020857	sfswap	74	79.910	Neolamprologus_brichardi
ENSXMAG00000009020	sfswap	96	53.059	ENSNLEG00000008386	SFSWAP	72	60.372	Nomascus_leucogenys
ENSXMAG00000009020	sfswap	71	65.000	ENSOPRG00000006983	-	75	65.000	Ochotona_princeps
ENSXMAG00000009020	sfswap	89	73.197	ENSONIG00000003757	sfswap	88	71.913	Oreochromis_niloticus
ENSXMAG00000009020	sfswap	89	65.499	ENSOCUG00000002165	SFSWAP	76	56.728	Oryctolagus_cuniculus
ENSXMAG00000009020	sfswap	77	77.579	ENSORLG00000010983	sfswap	77	77.854	Oryzias_latipes
ENSXMAG00000009020	sfswap	77	77.717	ENSORLG00020010779	sfswap	77	77.992	Oryzias_latipes_hni
ENSXMAG00000009020	sfswap	77	78.022	ENSORLG00015023093	sfswap	77	78.297	Oryzias_latipes_hsok
ENSXMAG00000009020	sfswap	77	78.552	ENSOMEG00000022065	sfswap	77	78.700	Oryzias_melastigma
ENSXMAG00000009020	sfswap	80	66.667	ENSOGAG00000016724	SFSWAP	82	59.192	Otolemur_garnettii
ENSXMAG00000009020	sfswap	82	59.406	ENSOARG00000014314	SFSWAP	81	60.369	Ovis_aries
ENSXMAG00000009020	sfswap	89	67.751	ENSPPAG00000036706	SFSWAP	81	60.545	Pan_paniscus
ENSXMAG00000009020	sfswap	97	50.441	ENSPPRG00000017318	SFSWAP	83	58.774	Panthera_pardus
ENSXMAG00000009020	sfswap	91	64.583	ENSPTIG00000004304	SFSWAP	72	66.942	Panthera_tigris_altaica
ENSXMAG00000009020	sfswap	89	67.751	ENSPTRG00000005640	SFSWAP	83	59.414	Pan_troglodytes
ENSXMAG00000009020	sfswap	89	67.751	ENSPANG00000019737	SFSWAP	81	60.689	Papio_anubis
ENSXMAG00000009020	sfswap	72	64.877	ENSPKIG00000008327	sfswap	73	65.797	Paramormyrops_kingsleyae
ENSXMAG00000009020	sfswap	92	62.687	ENSPEMG00000001237	Sfswap	71	60.515	Peromyscus_maniculatus_bairdii
ENSXMAG00000009020	sfswap	85	68.580	ENSPCIG00000006062	SFSWAP	77	58.772	Phascolarctos_cinereus
ENSXMAG00000009020	sfswap	100	96.888	ENSPFOG00000019657	sfswap	100	96.888	Poecilia_formosa
ENSXMAG00000009020	sfswap	100	96.781	ENSPLAG00000008513	sfswap	100	96.781	Poecilia_latipinna
ENSXMAG00000009020	sfswap	100	97.297	ENSPMEG00000008716	sfswap	100	97.297	Poecilia_mexicana
ENSXMAG00000009020	sfswap	100	96.404	ENSPREG00000006692	sfswap	100	96.404	Poecilia_reticulata
ENSXMAG00000009020	sfswap	89	67.568	ENSPPYG00000005129	SFSWAP	72	60.545	Pongo_abelii
ENSXMAG00000009020	sfswap	52	62.097	ENSPCAG00000004977	-	57	61.414	Procavia_capensis
ENSXMAG00000009020	sfswap	89	67.209	ENSPCOG00000023786	SFSWAP	84	58.299	Propithecus_coquereli
ENSXMAG00000009020	sfswap	72	64.854	ENSPNAG00000007073	sfswap	73	66.948	Pygocentrus_nattereri
ENSXMAG00000009020	sfswap	89	66.938	ENSRNOG00000000931	Sfswap	98	44.215	Rattus_norvegicus
ENSXMAG00000009020	sfswap	89	67.568	ENSRBIG00000036330	SFSWAP	73	58.442	Rhinopithecus_bieti
ENSXMAG00000009020	sfswap	89	67.385	ENSSBOG00000026217	SFSWAP	81	60.258	Saimiri_boliviensis_boliviensis
ENSXMAG00000009020	sfswap	97	50.905	ENSSHAG00000014232	SFSWAP	72	59.754	Sarcophilus_harrisii
ENSXMAG00000009020	sfswap	68	67.519	ENSSFOG00015000766	sfswap	70	66.966	Scleropages_formosus
ENSXMAG00000009020	sfswap	77	78.581	ENSSMAG00000018718	sfswap	76	77.899	Scophthalmus_maximus
ENSXMAG00000009020	sfswap	75	67.188	ENSSARG00000000424	SFSWAP	84	60.366	Sorex_araneus
ENSXMAG00000009020	sfswap	91	49.087	ENSSPUG00000010272	SFSWAP	73	53.681	Sphenodon_punctatus
ENSXMAG00000009020	sfswap	76	81.907	ENSSPAG00000014310	sfswap	79	80.676	Stegastes_partitus
ENSXMAG00000009020	sfswap	99	52.457	ENSSSCG00000009744	SFSWAP	74	60.640	Sus_scrofa
ENSXMAG00000009020	sfswap	97	54.321	ENSTGUG00000004623	SFSWAP	74	60.057	Taeniopygia_guttata
ENSXMAG00000009020	sfswap	53	72.662	ENSTBEG00000004983	-	52	72.692	Tupaia_belangeri
ENSXMAG00000009020	sfswap	65	80.488	ENSTTRG00000013478	SFSWAP	73	54.167	Tursiops_truncatus
ENSXMAG00000009020	sfswap	55	66.580	ENSUAMG00000016807	SFSWAP	80	59.424	Ursus_americanus
ENSXMAG00000009020	sfswap	75	67.232	ENSUMAG00000002957	SFSWAP	75	55.696	Ursus_maritimus
ENSXMAG00000009020	sfswap	97	54.162	ENSVVUG00000010753	SFSWAP	74	59.384	Vulpes_vulpes
ENSXMAG00000009020	sfswap	97	47.860	ENSXETG00000009350	sfswap	88	58.032	Xenopus_tropicalis