EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000009080 (Gene tree)
Gene ID
102236704
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Minus strand
Length
26130 bases
Position
chr1:1192672-1218801
Accession
102236704
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000009120CSDPF00313.221.1e-7915
ENSXMAP00000009120CSDPF00313.221.1e-7925
ENSXMAP00000009120CSDPF00313.221.1e-7935
ENSXMAP00000009120CSDPF00313.221.1e-7945
ENSXMAP00000009120CSDPF00313.221.1e-7955
ENSXMAP00000033169CSDPF00313.223.5e-7915
ENSXMAP00000033169CSDPF00313.223.5e-7925
ENSXMAP00000033169CSDPF00313.223.5e-7935
ENSXMAP00000033169CSDPF00313.223.5e-7945
ENSXMAP00000033169CSDPF00313.223.5e-7955
ENSXMAP00000025106CSDPF00313.224.6e-7915
ENSXMAP00000025106CSDPF00313.224.6e-7925
ENSXMAP00000025106CSDPF00313.224.6e-7935
ENSXMAP00000025106CSDPF00313.224.6e-7945
ENSXMAP00000025106CSDPF00313.224.6e-7955
ENSXMAP00000040215CSDPF00313.225.4e-7915
ENSXMAP00000040215CSDPF00313.225.4e-7925
ENSXMAP00000040215CSDPF00313.225.4e-7935
ENSXMAP00000040215CSDPF00313.225.4e-7945
ENSXMAP00000040215CSDPF00313.225.4e-7955
ENSXMAP00000024678CSDPF00313.226.2e-7915
ENSXMAP00000024678CSDPF00313.226.2e-7925
ENSXMAP00000024678CSDPF00313.226.2e-7935
ENSXMAP00000024678CSDPF00313.226.2e-7945
ENSXMAP00000024678CSDPF00313.226.2e-7955
ENSXMAP00000020890CSDPF00313.221e-7815
ENSXMAP00000020890CSDPF00313.221e-7825
ENSXMAP00000020890CSDPF00313.221e-7835
ENSXMAP00000020890CSDPF00313.221e-7845
ENSXMAP00000020890CSDPF00313.221e-7855
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000027316-7746-ENSXMAP00000024678903 (aa)--
ENSXMAT00000038759-7569XM_014474717ENSXMAP00000025106844 (aa)XP_014330203-
ENSXMAT00000035831-7374XM_014474720ENSXMAP00000033169821 (aa)XP_014330206-
ENSXMAT00000026565-7758-ENSXMAP00000020890907 (aa)--
ENSXMAT00000023456-7506XM_023333591ENSXMAP00000040215855 (aa)XP_023189359-
ENSXMAT00000009134-2307-ENSXMAP00000009120768 (aa)-M4A3S6
Gene Model
Click here to download ENSXMAG00000009080's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009080's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000009080csde19877.719ENSG00000009307CSDE110087.500Homo_sapiens
ENSXMAG00000009080csde110092.570ENSAPOG00000015538csde110092.570Acanthochromis_polyacanthus
ENSXMAG00000009080csde19877.056ENSAMEG00000017129CSDE19972.479Ailuropoda_melanoleuca
ENSXMAG00000009080csde18891.444ENSACIG00000015175csde110092.432Amphilophus_citrinellus
ENSXMAG00000009080csde110091.839ENSAOCG00000011510csde19892.308Amphiprion_ocellaris
ENSXMAG00000009080csde110091.961ENSAPEG00000007194csde110091.839Amphiprion_percula
ENSXMAG00000009080csde19891.379ENSATEG00000003864csde19891.379Anabas_testudineus
ENSXMAG00000009080csde19879.735ENSAPLG00000008797CSDE19879.735Anas_platyrhynchos
ENSXMAG00000009080csde110077.549ENSACAG00000003120CSDE110079.775Anolis_carolinensis
ENSXMAG00000009080csde19362.544ENSANAG00000028396-9362.544Aotus_nancymaae
ENSXMAG00000009080csde19877.454ENSANAG00000024665CSDE19975.503Aotus_nancymaae
ENSXMAG00000009080csde19892.175ENSACLG00000013296csde110092.105Astatotilapia_calliptera
ENSXMAG00000009080csde19886.508ENSAMXG00000007436csde19886.508Astyanax_mexicanus
ENSXMAG00000009080csde19877.321ENSBTAG00000000678CSDE19877.321Bos_taurus
ENSXMAG00000009080csde19877.454ENSCJAG00000012565CSDE19975.621Callithrix_jacchus
ENSXMAG00000009080csde19877.984ENSCAFG00000009618CSDE19973.640Canis_familiaris
ENSXMAG00000009080csde19877.984ENSCAFG00020000481CSDE19877.984Canis_lupus_dingo
ENSXMAG00000009080csde19877.454ENSCHIG00000017250CSDE19877.454Capra_hircus
ENSXMAG00000009080csde19877.851ENSTSYG00000003747CSDE110077.528Carlito_syrichta
ENSXMAG00000009080csde19579.141ENSCAPG00000015128CSDE110079.141Cavia_aperea
ENSXMAG00000009080csde110071.255ENSCPOG00000040388CSDE110073.308Cavia_porcellus
ENSXMAG00000009080csde19877.454ENSCCAG00000036794CSDE110077.125Cebus_capucinus
ENSXMAG00000009080csde19555.687ENSCCAG00000033677-9955.687Cebus_capucinus
ENSXMAG00000009080csde19753.524ENSCCAG00000030878-9154.000Cebus_capucinus
ENSXMAG00000009080csde19877.719ENSCATG00000036962CSDE19975.858Cercocebus_atys
ENSXMAG00000009080csde19877.851ENSCLAG00000006618CSDE110077.500Chinchilla_lanigera
ENSXMAG00000009080csde110075.243ENSCSAG00000001658CSDE19975.858Chlorocebus_sabaeus
ENSXMAG00000009080csde110082.524ENSCHOG00000000918CSDE19080.793Choloepus_hoffmanni
ENSXMAG00000009080csde19880.000ENSCPBG00000016547CSDE110079.625Chrysemys_picta_bellii
ENSXMAG00000009080csde19842.840ENSCING00000014465-9842.606Ciona_intestinalis
ENSXMAG00000009080csde19741.396ENSCSAVG00000008100-10041.516Ciona_savignyi
ENSXMAG00000009080csde19080.451ENSCANG00000031069-9480.000Colobus_angolensis_palliatus
ENSXMAG00000009080csde19877.719ENSCANG00000035096CSDE19975.740Colobus_angolensis_palliatus
ENSXMAG00000009080csde19877.056ENSCGRG00001016833-10076.750Cricetulus_griseus_chok1gshd
ENSXMAG00000009080csde19862.997ENSCGRG00001014011-9862.997Cricetulus_griseus_chok1gshd
ENSXMAG00000009080csde19772.467ENSCGRG00000002225-10072.889Cricetulus_griseus_crigri
ENSXMAG00000009080csde19873.913ENSCGRG00000005831-9873.913Cricetulus_griseus_crigri
ENSXMAG00000009080csde110089.403ENSCSEG00000002620csde19889.523Cynoglossus_semilaevis
ENSXMAG00000009080csde110097.038ENSCVAG00000001344csde110097.038Cyprinodon_variegatus
ENSXMAG00000009080csde110085.280ENSDARG00000074758csde110088.129Danio_rerio
ENSXMAG00000009080csde15954.237ENSDNOG00000034464-9960.833Dasypus_novemcinctus
ENSXMAG00000009080csde19878.146ENSDNOG00000010287-9178.146Dasypus_novemcinctus
ENSXMAG00000009080csde19975.857ENSDORG00000011609Csde110076.875Dipodomys_ordii
ENSXMAG00000009080csde19748.875FBgn0263352Unr8249.695Drosophila_melanogaster
ENSXMAG00000009080csde19354.237ENSETEG00000007109-9953.795Echinops_telfairi
ENSXMAG00000009080csde18880.488ENSETEG00000002491-8771.470Echinops_telfairi
ENSXMAG00000009080csde19960.157ENSETEG00000013678-9960.157Echinops_telfairi
ENSXMAG00000009080csde19168.878ENSETEG00000006280-9968.878Echinops_telfairi
ENSXMAG00000009080csde19953.892ENSEBUG00000008647csde19953.699Eptatretus_burgeri
ENSXMAG00000009080csde19878.117ENSEASG00005006284CSDE110077.750Equus_asinus_asinus
ENSXMAG00000009080csde19878.117ENSECAG00000020885CSDE110077.750Equus_caballus
ENSXMAG00000009080csde19282.866ENSEEUG00000006286CSDE16882.866Erinaceus_europaeus
ENSXMAG00000009080csde110086.747ENSELUG00000015507csde110085.206Esox_lucius
ENSXMAG00000009080csde19877.984ENSFCAG00000029266CSDE19877.984Felis_catus
ENSXMAG00000009080csde110077.427ENSFALG00000003407CSDE110079.625Ficedula_albicollis
ENSXMAG00000009080csde19975.857ENSFDAG00000007882CSDE110076.875Fukomys_damarensis
ENSXMAG00000009080csde110096.499ENSFHEG00000010799csde110097.494Fundulus_heteroclitus
ENSXMAG00000009080csde19985.140ENSGMOG00000012731csde110087.594Gadus_morhua
ENSXMAG00000009080csde19976.299ENSGALG00000002139CSDE19879.363Gallus_gallus
ENSXMAG00000009080csde19499.389ENSGAFG00000005241csde19599.389Gambusia_affinis
ENSXMAG00000009080csde19988.659ENSGACG00000004544csde110091.217Gasterosteus_aculeatus
ENSXMAG00000009080csde19879.735ENSGAGG00000017685CSDE110079.375Gopherus_agassizii
ENSXMAG00000009080csde19877.719ENSGGOG00000002164CSDE19877.719Gorilla_gorilla
ENSXMAG00000009080csde110092.417ENSHBUG00000020315csde110092.417Haplochromis_burtoni
ENSXMAG00000009080csde19967.511ENSHGLG00000008555-9967.916Heterocephalus_glaber_female
ENSXMAG00000009080csde110068.447ENSHGLG00000009620-10070.500Heterocephalus_glaber_female
ENSXMAG00000009080csde19764.978ENSHGLG00000010039-10065.556Heterocephalus_glaber_female
ENSXMAG00000009080csde19867.328ENSHGLG00000007471-9767.328Heterocephalus_glaber_female
ENSXMAG00000009080csde110063.625ENSHGLG00000019549-10065.207Heterocephalus_glaber_female
ENSXMAG00000009080csde19960.341ENSHGLG00000000650-9962.078Heterocephalus_glaber_female
ENSXMAG00000009080csde19869.496ENSHGLG00000003829-9869.496Heterocephalus_glaber_female
ENSXMAG00000009080csde19465.139ENSHGLG00100004195-10065.139Heterocephalus_glaber_male
ENSXMAG00000009080csde19866.842ENSHGLG00100007287-9766.842Heterocephalus_glaber_male
ENSXMAG00000009080csde19963.636ENSHGLG00100002245-9965.461Heterocephalus_glaber_male
ENSXMAG00000009080csde19764.758ENSHGLG00100006910-10065.333Heterocephalus_glaber_male
ENSXMAG00000009080csde19877.454ENSHGLG00100019438-10077.125Heterocephalus_glaber_male
ENSXMAG00000009080csde19863.528ENSHGLG00100001846-9863.528Heterocephalus_glaber_male
ENSXMAG00000009080csde19759.692ENSHGLG00100004833-10060.222Heterocephalus_glaber_male
ENSXMAG00000009080csde19864.987ENSHGLG00100012072-9864.987Heterocephalus_glaber_male
ENSXMAG00000009080csde110090.521ENSHCOG00000004158csde110090.521Hippocampus_comes
ENSXMAG00000009080csde19885.185ENSIPUG00000000355csde19885.185Ictalurus_punctatus
ENSXMAG00000009080csde110061.882ENSSTOG00000030994-10063.648Ictidomys_tridecemlineatus
ENSXMAG00000009080csde19061.538ENSSTOG00000032722-9961.538Ictidomys_tridecemlineatus
ENSXMAG00000009080csde19976.119ENSJJAG00000019571Csde110077.000Jaculus_jaculus
ENSXMAG00000009080csde110091.735ENSKMAG00000005685csde110092.680Kryptolebias_marmoratus
ENSXMAG00000009080csde110091.961ENSLBEG00000014770csde19892.175Labrus_bergylta
ENSXMAG00000009080csde110074.430ENSLACG00000018452CSDE19974.299Latimeria_chalumnae
ENSXMAG00000009080csde110083.069ENSLOCG00000010413csde110083.001Lepisosteus_oculatus
ENSXMAG00000009080csde19877.454ENSLAFG00000007150CSDE19477.454Loxodonta_africana
ENSXMAG00000009080csde19877.719ENSMFAG00000003674CSDE19877.719Macaca_fascicularis
ENSXMAG00000009080csde19877.719ENSMMUG00000001974CSDE110076.934Macaca_mulatta
ENSXMAG00000009080csde19877.719ENSMNEG00000045247CSDE19975.858Macaca_nemestrina
ENSXMAG00000009080csde19877.454ENSMLEG00000038673CSDE19975.621Mandrillus_leucophaeus
ENSXMAG00000009080csde110092.083ENSMAMG00000008821csde110090.267Mastacembelus_armatus
ENSXMAG00000009080csde110091.462ENSMZEG00005021675csde110091.647Maylandia_zebra
ENSXMAG00000009080csde19879.630ENSMGAG00000016381CSDE19879.630Meleagris_gallopavo
ENSXMAG00000009080csde19975.857ENSMAUG00000014031Csde110076.750Mesocricetus_auratus
ENSXMAG00000009080csde19877.851ENSMICG00000002050CSDE19975.858Microcebus_murinus
ENSXMAG00000009080csde19877.188ENSMOCG00000018960Csde110076.750Microtus_ochrogaster
ENSXMAG00000009080csde19892.175ENSMMOG00000015075csde19892.175Mola_mola
ENSXMAG00000009080csde110076.699ENSMODG00000004685CSDE110078.875Monodelphis_domestica
ENSXMAG00000009080csde19891.910ENSMALG00000007132csde19891.910Monopterus_albus
ENSXMAG00000009080csde19877.188MGP_CAROLIEiJ_G0025444Csde110086.755Mus_caroli
ENSXMAG00000009080csde19877.321ENSMUSG00000068823Csde110086.755Mus_musculus
ENSXMAG00000009080csde19877.188MGP_PahariEiJ_G0026888Csde110086.755Mus_pahari
ENSXMAG00000009080csde19877.188MGP_SPRETEiJ_G0026394Csde110086.755Mus_spretus
ENSXMAG00000009080csde19875.619ENSMPUG00000005753CSDE19977.806Mustela_putorius_furo
ENSXMAG00000009080csde19877.291ENSMLUG00000005681CSDE19973.159Myotis_lucifugus
ENSXMAG00000009080csde19751.322ENSNGAG00000012599-10051.556Nannospalax_galili
ENSXMAG00000009080csde19975.708ENSNGAG00000021929Csde110076.625Nannospalax_galili
ENSXMAG00000009080csde19892.175ENSNBRG00000020808csde19892.175Neolamprologus_brichardi
ENSXMAG00000009080csde19877.719ENSNLEG00000004842CSDE19975.858Nomascus_leucogenys
ENSXMAG00000009080csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSXMAG00000009080csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSXMAG00000009080csde19752.298ENSODEG00000005979-9852.759Octodon_degus
ENSXMAG00000009080csde19976.006ENSODEG00000007383-10076.875Octodon_degus
ENSXMAG00000009080csde110091.596ENSONIG00000009309csde110091.352Oreochromis_niloticus
ENSXMAG00000009080csde19886.364ENSOANG00000003346-8186.364Ornithorhynchus_anatinus
ENSXMAG00000009080csde19877.321ENSOCUG00000016438CSDE19875.866Oryctolagus_cuniculus
ENSXMAG00000009080csde110090.134ENSORLG00000000707csde110089.890Oryzias_latipes
ENSXMAG00000009080csde110090.012ENSORLG00020005148csde110089.894Oryzias_latipes_hni
ENSXMAG00000009080csde110090.012ENSORLG00015019415csde110089.769Oryzias_latipes_hsok
ENSXMAG00000009080csde110089.160ENSOMEG00000015656csde110089.769Oryzias_melastigma
ENSXMAG00000009080csde19877.851ENSOGAG00000012127CSDE19973.547Otolemur_garnettii
ENSXMAG00000009080csde19877.454ENSOARG00000020034CSDE19973.072Ovis_aries
ENSXMAG00000009080csde19877.719ENSPPAG00000025861CSDE19877.719Pan_paniscus
ENSXMAG00000009080csde19877.984ENSPPRG00000006747CSDE19976.095Panthera_pardus
ENSXMAG00000009080csde19877.984ENSPTIG00000015468CSDE110077.625Panthera_tigris_altaica
ENSXMAG00000009080csde19877.719ENSPTRG00000033721CSDE110077.375Pan_troglodytes
ENSXMAG00000009080csde19877.719ENSPANG00000018873CSDE19877.719Papio_anubis
ENSXMAG00000009080csde19984.666ENSPKIG00000009459csde19984.666Paramormyrops_kingsleyae
ENSXMAG00000009080csde19679.281ENSPSIG00000003823CSDE19682.561Pelodiscus_sinensis
ENSXMAG00000009080csde19888.874ENSPMGG00000000772csde19888.874Periophthalmus_magnuspinnatus
ENSXMAG00000009080csde19976.006ENSPEMG00000020357-10077.000Peromyscus_maniculatus_bairdii
ENSXMAG00000009080csde110076.820ENSPCIG00000022587CSDE110079.026Phascolarctos_cinereus
ENSXMAG00000009080csde19798.445ENSPFOG00000012664csde110098.445Poecilia_formosa
ENSXMAG00000009080csde19790.896ENSPLAG00000017680csde19690.896Poecilia_latipinna
ENSXMAG00000009080csde19592.934ENSPMEG00000005094csde19592.934Poecilia_mexicana
ENSXMAG00000009080csde110098.934ENSPREG00000011631csde110098.934Poecilia_reticulata
ENSXMAG00000009080csde110075.121ENSPPYG00000000996CSDE110077.250Pongo_abelii
ENSXMAG00000009080csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSXMAG00000009080csde19877.984ENSPCOG00000017893CSDE110077.500Propithecus_coquereli
ENSXMAG00000009080csde19071.004ENSPCOG00000008223-9271.004Propithecus_coquereli
ENSXMAG00000009080csde19276.901ENSPVAG00000008225CSDE19968.690Pteropus_vampyrus
ENSXMAG00000009080csde110091.462ENSPNYG00000013745csde110091.462Pundamilia_nyererei
ENSXMAG00000009080csde110086.016ENSPNAG00000001958csde110086.604Pygocentrus_nattereri
ENSXMAG00000009080csde110074.757ENSRNOG00000061058Csde110076.750Rattus_norvegicus
ENSXMAG00000009080csde19873.148ENSRBIG00000038966-9971.395Rhinopithecus_bieti
ENSXMAG00000009080csde19874.702ENSRBIG00000038088-9974.138Rhinopithecus_bieti
ENSXMAG00000009080csde19877.719ENSRROG00000043101CSDE19975.858Rhinopithecus_roxellana
ENSXMAG00000009080csde19877.454ENSSBOG00000035592CSDE19975.621Saimiri_boliviensis_boliviensis
ENSXMAG00000009080csde19879.443ENSSHAG00000009831CSDE19879.443Sarcophilus_harrisii
ENSXMAG00000009080csde110092.857ENSSFOG00015007498csde110084.184Scleropages_formosus
ENSXMAG00000009080csde110091.108ENSSMAG00000007203csde110090.499Scophthalmus_maximus
ENSXMAG00000009080csde110092.102ENSSDUG00000015380csde19892.971Seriola_dumerili
ENSXMAG00000009080csde110092.299ENSSLDG00000008819csde110092.481Seriola_lalandi_dorsalis
ENSXMAG00000009080csde19877.454ENSSARG00000000738CSDE19972.771Sorex_araneus
ENSXMAG00000009080csde19979.685ENSSPUG00000008714CSDE110079.875Sphenodon_punctatus
ENSXMAG00000009080csde110092.588ENSSPAG00000000716csde110092.588Stegastes_partitus
ENSXMAG00000009080csde19878.117ENSSSCG00000006752CSDE19878.117Sus_scrofa
ENSXMAG00000009080csde110076.634ENSTGUG00000000972CSDE110078.803Taeniopygia_guttata
ENSXMAG00000009080csde19885.809ENSTRUG00000007996csde19885.809Takifugu_rubripes
ENSXMAG00000009080csde18893.103ENSTNIG00000010878csde110093.103Tetraodon_nigroviridis
ENSXMAG00000009080csde19082.209ENSTBEG00000011880-5882.209Tupaia_belangeri
ENSXMAG00000009080csde19877.454ENSTTRG00000015583CSDE19873.413Tursiops_truncatus
ENSXMAG00000009080csde19283.498ENSUAMG00000021779-9883.062Ursus_americanus
ENSXMAG00000009080csde18973.280ENSUAMG00000024289-9973.280Ursus_americanus
ENSXMAG00000009080csde19771.831ENSUMAG00000011714-9972.512Ursus_maritimus
ENSXMAG00000009080csde19871.220ENSUMAG00000009720-10066.910Ursus_maritimus
ENSXMAG00000009080csde19880.698ENSVPAG00000000749CSDE18474.648Vicugna_pacos
ENSXMAG00000009080csde19374.085ENSVVUG00000009890CSDE19476.565Vulpes_vulpes
ENSXMAG00000009080csde110075.787ENSXETG00000021448csde110077.958Xenopus_tropicalis
ENSXMAG00000009080csde194100.000ENSXCOG00000000035csde189100.000Xiphophorus_couchianus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us