EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009193 (Gene tree)
Gene ID: 102228520
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 6802 bases
Position: chr16:7743868-7750669
Accession: 102228520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009214	MMR_HSR1	PF01926.23	4.3e-05	1	1
ENSXMAP00000023661	MMR_HSR1	PF01926.23	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029257	-	525	-	ENSXMAP00000023661	174 (aa)	-	-
ENSXMAT00000009228	-	2805	XM_005796708	ENSXMAP00000009214	180 (aa)	XP_005796765	M4A420

Gene Model

Click here to download ENSXMAG00000009193's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009193	-	100	96.111	ENSACIG00000012192	-	100	96.111	Amphilophus_citrinellus
ENSXMAG00000009193	-	84	98.013	ENSAOCG00000001275	-	88	98.013	Amphiprion_ocellaris
ENSXMAG00000009193	-	100	97.778	ENSAPEG00000016909	-	100	97.778	Amphiprion_percula
ENSXMAG00000009193	-	100	98.333	ENSATEG00000003174	-	100	98.333	Anabas_testudineus
ENSXMAG00000009193	-	100	96.111	ENSACLG00000004123	-	100	96.111	Astatotilapia_calliptera
ENSXMAG00000009193	-	100	92.818	ENSAMXG00000019845	arf1	100	92.818	Astyanax_mexicanus
ENSXMAG00000009193	-	100	100.000	ENSCVAG00000013374	-	100	100.000	Cyprinodon_variegatus
ENSXMAG00000009193	-	100	92.818	ENSDARG00000009484	arf1	100	92.818	Danio_rerio
ENSXMAG00000009193	-	100	93.370	ENSELUG00000022533	arf1	79	93.370	Esox_lucius
ENSXMAG00000009193	-	100	99.444	ENSFHEG00000005859	-	100	99.444	Fundulus_heteroclitus
ENSXMAG00000009193	-	95	90.303	ENSGMOG00000000429	arf1	95	88.439	Gadus_morhua
ENSXMAG00000009193	-	100	100.000	ENSGAFG00000018151	-	100	100.000	Gambusia_affinis
ENSXMAG00000009193	-	100	86.667	ENSGACG00000014195	-	97	86.667	Gasterosteus_aculeatus
ENSXMAG00000009193	-	100	96.111	ENSHBUG00000002636	-	100	96.111	Haplochromis_burtoni
ENSXMAG00000009193	-	100	92.265	ENSIPUG00000006311	arf1	100	92.265	Ictalurus_punctatus
ENSXMAG00000009193	-	100	95.000	ENSKMAG00000018315	-	100	95.000	Kryptolebias_marmoratus
ENSXMAG00000009193	-	99	89.385	ENSLBEG00000001998	arf1	99	89.385	Labrus_bergylta
ENSXMAG00000009193	-	98	91.765	ENSLBEG00000023263	-	98	88.764	Labrus_bergylta
ENSXMAG00000009193	-	100	98.333	ENSMAMG00000001553	-	100	98.333	Mastacembelus_armatus
ENSXMAG00000009193	-	100	96.111	ENSMZEG00005022594	-	100	96.111	Maylandia_zebra
ENSXMAG00000009193	-	100	97.778	ENSMALG00000004269	-	100	97.778	Monopterus_albus
ENSXMAG00000009193	-	100	96.111	ENSNBRG00000016455	-	100	96.111	Neolamprologus_brichardi
ENSXMAG00000009193	-	100	96.111	ENSONIG00000001286	-	100	96.111	Oreochromis_niloticus
ENSXMAG00000009193	-	100	97.222	ENSORLG00000023270	-	100	97.222	Oryzias_latipes
ENSXMAG00000009193	-	100	96.667	ENSORLG00020006712	-	100	96.667	Oryzias_latipes_hni
ENSXMAG00000009193	-	100	97.222	ENSORLG00015019836	-	100	97.222	Oryzias_latipes_hsok
ENSXMAG00000009193	-	100	97.222	ENSOMEG00000023784	-	100	97.222	Oryzias_melastigma
ENSXMAG00000009193	-	98	91.176	ENSPMGG00000014174	arf1	98	91.176	Periophthalmus_magnuspinnatus
ENSXMAG00000009193	-	98	95.294	ENSPMAG00000002035	arf1	100	92.778	Petromyzon_marinus
ENSXMAG00000009193	-	100	100.000	ENSPFOG00000014787	-	100	100.000	Poecilia_formosa
ENSXMAG00000009193	-	100	100.000	ENSPLAG00000001041	-	100	100.000	Poecilia_latipinna
ENSXMAG00000009193	-	100	100.000	ENSPMEG00000024077	-	100	100.000	Poecilia_mexicana
ENSXMAG00000009193	-	100	100.000	ENSPREG00000009009	-	100	100.000	Poecilia_reticulata
ENSXMAG00000009193	-	100	96.111	ENSPNYG00000009472	-	100	96.111	Pundamilia_nyererei
ENSXMAG00000009193	-	97	95.266	ENSPNAG00000000098	arf1	93	95.266	Pygocentrus_nattereri
ENSXMAG00000009193	-	99	75.978	YDL137W	-	99	75.978	Saccharomyces_cerevisiae
ENSXMAG00000009193	-	99	76.667	YDL192W	-	99	76.667	Saccharomyces_cerevisiae
ENSXMAG00000009193	-	100	91.111	ENSSMAG00000006125	-	100	91.111	Scophthalmus_maximus
ENSXMAG00000009193	-	100	97.222	ENSSDUG00000017356	-	100	97.222	Seriola_dumerili
ENSXMAG00000009193	-	100	97.222	ENSSLDG00000008504	-	100	97.222	Seriola_lalandi_dorsalis
ENSXMAG00000009193	-	100	98.333	ENSSPAG00000011431	-	100	98.333	Stegastes_partitus
ENSXMAG00000009193	-	100	95.000	ENSTRUG00000019870	-	100	95.000	Takifugu_rubripes
ENSXMAG00000009193	-	100	93.333	ENSTNIG00000011685	-	100	93.333	Tetraodon_nigroviridis
ENSXMAG00000009193	-	100	100.000	ENSXCOG00000016687	-	98	100.000	Xiphophorus_couchianus