EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009256 (Gene tree)
Gene ID: 102217230
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6722 bases
Position: chr12:2864726-2871447
Accession: 102217230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009272	Pept_tRNA_hydro	PF01195.19	9.8e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000009286	-	2841	XM_023343084	ENSXMAP00000009272	265 (aa)	XP_023198852	M4A478

Gene Model

Click here to download ENSXMAG00000009256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009256	ptrh1	77	51.220	ENSG00000187024	PTRH1	96	51.220	Homo_sapiens
ENSXMAG00000009256	ptrh1	98	80.077	ENSAPOG00000010719	ptrh1	93	80.077	Acanthochromis_polyacanthus
ENSXMAG00000009256	ptrh1	98	80.077	ENSAPOG00000003014	-	93	80.077	Acanthochromis_polyacanthus
ENSXMAG00000009256	ptrh1	98	80.077	ENSAPOG00000000947	PTRH1	93	80.077	Acanthochromis_polyacanthus
ENSXMAG00000009256	ptrh1	73	51.031	ENSAMEG00000016791	PTRH1	91	51.031	Ailuropoda_melanoleuca
ENSXMAG00000009256	ptrh1	74	85.787	ENSACIG00000006734	ptrh1	85	85.787	Amphilophus_citrinellus
ENSXMAG00000009256	ptrh1	97	81.712	ENSAOCG00000009725	ptrh1	93	80.534	Amphiprion_ocellaris
ENSXMAG00000009256	ptrh1	97	81.712	ENSAPEG00000020993	ptrh1	93	80.534	Amphiprion_percula
ENSXMAG00000009256	ptrh1	97	78.544	ENSATEG00000010003	ptrh1	93	78.544	Anabas_testudineus
ENSXMAG00000009256	ptrh1	77	53.171	ENSANAG00000025547	PTRH1	96	53.171	Aotus_nancymaae
ENSXMAG00000009256	ptrh1	98	75.472	ENSACLG00000025462	ptrh1	95	77.358	Astatotilapia_calliptera
ENSXMAG00000009256	ptrh1	93	60.241	ENSAMXG00000034117	ptrh1	92	60.241	Astyanax_mexicanus
ENSXMAG00000009256	ptrh1	73	54.124	ENSCJAG00000019841	PTRH1	74	54.815	Callithrix_jacchus
ENSXMAG00000009256	ptrh1	73	52.577	ENSCAFG00000020123	PTRH1	90	52.577	Canis_familiaris
ENSXMAG00000009256	ptrh1	73	52.850	ENSCAFG00020015776	PTRH1	87	52.850	Canis_lupus_dingo
ENSXMAG00000009256	ptrh1	72	56.771	ENSCHIG00000008188	PTRH1	90	56.771	Capra_hircus
ENSXMAG00000009256	ptrh1	52	54.745	ENSCAPG00000015926	PTRH1	98	54.745	Cavia_aperea
ENSXMAG00000009256	ptrh1	66	57.386	ENSCPOG00000023968	PTRH1	82	57.386	Cavia_porcellus
ENSXMAG00000009256	ptrh1	78	51.442	ENSCCAG00000023134	PTRH1	97	51.442	Cebus_capucinus
ENSXMAG00000009256	ptrh1	77	51.220	ENSCATG00000042852	PTRH1	96	51.220	Cercocebus_atys
ENSXMAG00000009256	ptrh1	72	54.688	ENSCLAG00000011155	PTRH1	90	54.688	Chinchilla_lanigera
ENSXMAG00000009256	ptrh1	77	51.220	ENSCSAG00000013748	PTRH1	92	48.649	Chlorocebus_sabaeus
ENSXMAG00000009256	ptrh1	63	54.491	ENSCPBG00000025207	PTRH1	95	54.491	Chrysemys_picta_bellii
ENSXMAG00000009256	ptrh1	84	48.649	ENSCANG00000039856	PTRH1	98	48.649	Colobus_angolensis_palliatus
ENSXMAG00000009256	ptrh1	74	55.385	ENSCGRG00001013108	Ptrh1	94	55.385	Cricetulus_griseus_chok1gshd
ENSXMAG00000009256	ptrh1	69	56.522	ENSCGRG00000016553	Ptrh1	99	56.522	Cricetulus_griseus_crigri
ENSXMAG00000009256	ptrh1	94	68.582	ENSCSEG00000010332	ptrh1	95	68.582	Cynoglossus_semilaevis
ENSXMAG00000009256	ptrh1	98	82.308	ENSCVAG00000010701	ptrh1	96	82.308	Cyprinodon_variegatus
ENSXMAG00000009256	ptrh1	97	56.202	ENSDARG00000098206	ptrh1	86	66.834	Danio_rerio
ENSXMAG00000009256	ptrh1	66	58.523	ENSDNOG00000024194	PTRH1	82	58.523	Dasypus_novemcinctus
ENSXMAG00000009256	ptrh1	70	55.080	ENSDORG00000013321	Ptrh1	87	55.080	Dipodomys_ordii
ENSXMAG00000009256	ptrh1	72	55.208	ENSEASG00005020466	PTRH1	90	55.208	Equus_asinus_asinus
ENSXMAG00000009256	ptrh1	77	52.195	ENSECAG00000007615	PTRH1	75	52.195	Equus_caballus
ENSXMAG00000009256	ptrh1	98	64.751	ENSELUG00000015467	ptrh1	96	64.751	Esox_lucius
ENSXMAG00000009256	ptrh1	69	55.435	ENSFCAG00000001483	PTRH1	86	55.435	Felis_catus
ENSXMAG00000009256	ptrh1	66	52.299	ENSFALG00000001352	PTRH1	83	52.299	Ficedula_albicollis
ENSXMAG00000009256	ptrh1	73	55.440	ENSFDAG00000020077	PTRH1	95	55.440	Fukomys_damarensis
ENSXMAG00000009256	ptrh1	92	84.146	ENSFHEG00000010590	ptrh1	99	83.206	Fundulus_heteroclitus
ENSXMAG00000009256	ptrh1	54	65.035	ENSGMOG00000009801	PTRH1	100	65.035	Gadus_morhua
ENSXMAG00000009256	ptrh1	100	94.717	ENSGAFG00000016215	ptrh1	100	94.717	Gambusia_affinis
ENSXMAG00000009256	ptrh1	76	78.607	ENSGACG00000014682	ptrh1	91	81.609	Gasterosteus_aculeatus
ENSXMAG00000009256	ptrh1	80	54.976	ENSGAGG00000022860	PTRH1	94	54.976	Gopherus_agassizii
ENSXMAG00000009256	ptrh1	77	50.732	ENSGGOG00000011033	PTRH1	96	50.732	Gorilla_gorilla
ENSXMAG00000009256	ptrh1	98	76.981	ENSHBUG00000020824	ptrh1	95	76.981	Haplochromis_burtoni
ENSXMAG00000009256	ptrh1	73	55.959	ENSHGLG00000019147	PTRH1	94	55.959	Heterocephalus_glaber_female
ENSXMAG00000009256	ptrh1	73	52.850	ENSHGLG00100003681	PTRH1	96	52.850	Heterocephalus_glaber_male
ENSXMAG00000009256	ptrh1	88	65.517	ENSHCOG00000014772	ptrh1	92	63.786	Hippocampus_comes
ENSXMAG00000009256	ptrh1	94	60.714	ENSIPUG00000015364	ptrh1	93	62.762	Ictalurus_punctatus
ENSXMAG00000009256	ptrh1	63	59.036	ENSSTOG00000008942	PTRH1	90	53.646	Ictidomys_tridecemlineatus
ENSXMAG00000009256	ptrh1	72	55.208	ENSJJAG00000014338	Ptrh1	93	55.208	Jaculus_jaculus
ENSXMAG00000009256	ptrh1	98	78.544	ENSKMAG00000003253	ptrh1	95	78.544	Kryptolebias_marmoratus
ENSXMAG00000009256	ptrh1	72	57.513	ENSLACG00000016741	PTRH1	80	57.513	Latimeria_chalumnae
ENSXMAG00000009256	ptrh1	69	52.973	ENSLAFG00000021934	PTRH1	91	52.973	Loxodonta_africana
ENSXMAG00000009256	ptrh1	77	51.220	ENSMFAG00000001700	PTRH1	96	51.220	Macaca_fascicularis
ENSXMAG00000009256	ptrh1	77	51.220	ENSMMUG00000016424	PTRH1	96	51.220	Macaca_mulatta
ENSXMAG00000009256	ptrh1	77	51.220	ENSMNEG00000033061	PTRH1	92	48.649	Macaca_nemestrina
ENSXMAG00000009256	ptrh1	96	78.431	ENSMAMG00000017386	ptrh1	93	78.431	Mastacembelus_armatus
ENSXMAG00000009256	ptrh1	89	77.406	ENSMZEG00005020001	ptrh1	92	78.298	Maylandia_zebra
ENSXMAG00000009256	ptrh1	74	55.897	ENSMAUG00000006266	Ptrh1	94	55.897	Mesocricetus_auratus
ENSXMAG00000009256	ptrh1	72	54.639	ENSMICG00000005611	PTRH1	90	54.639	Microcebus_murinus
ENSXMAG00000009256	ptrh1	72	55.729	ENSMOCG00000013992	Ptrh1	94	55.729	Microtus_ochrogaster
ENSXMAG00000009256	ptrh1	97	75.862	ENSMMOG00000014747	ptrh1	92	77.011	Mola_mola
ENSXMAG00000009256	ptrh1	73	54.922	ENSMODG00000005503	PTRH1	89	54.922	Monodelphis_domestica
ENSXMAG00000009256	ptrh1	57	78.289	ENSMALG00000005392	ptrh1	89	78.289	Monopterus_albus
ENSXMAG00000009256	ptrh1	69	58.242	MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.242	Mus_caroli
ENSXMAG00000009256	ptrh1	69	58.242	ENSMUSG00000053746	Ptrh1	89	58.242	Mus_musculus
ENSXMAG00000009256	ptrh1	69	58.242	MGP_PahariEiJ_G0024907	Ptrh1	89	58.242	Mus_pahari
ENSXMAG00000009256	ptrh1	69	57.692	MGP_SPRETEiJ_G0024367	Ptrh1	89	57.692	Mus_spretus
ENSXMAG00000009256	ptrh1	73	53.061	ENSMPUG00000013790	PTRH1	89	53.061	Mustela_putorius_furo
ENSXMAG00000009256	ptrh1	72	51.980	ENSMLUG00000013454	PTRH1	91	51.980	Myotis_lucifugus
ENSXMAG00000009256	ptrh1	74	54.359	ENSNGAG00000014008	Ptrh1	96	54.359	Nannospalax_galili
ENSXMAG00000009256	ptrh1	98	77.358	ENSNBRG00000015590	ptrh1	95	77.358	Neolamprologus_brichardi
ENSXMAG00000009256	ptrh1	77	50.732	ENSNLEG00000017468	PTRH1	96	50.732	Nomascus_leucogenys
ENSXMAG00000009256	ptrh1	72	54.688	ENSODEG00000004012	PTRH1	91	54.688	Octodon_degus
ENSXMAG00000009256	ptrh1	92	76.518	ENSONIG00000013912	ptrh1	95	78.543	Oreochromis_niloticus
ENSXMAG00000009256	ptrh1	82	50.917	ENSOANG00000011891	PTRH1	93	50.917	Ornithorhynchus_anatinus
ENSXMAG00000009256	ptrh1	72	54.167	ENSOCUG00000006894	PTRH1	83	54.167	Oryctolagus_cuniculus
ENSXMAG00000009256	ptrh1	73	55.155	ENSOGAG00000008094	PTRH1	91	55.155	Otolemur_garnettii
ENSXMAG00000009256	ptrh1	72	51.244	ENSOARG00000011808	PTRH1	90	51.244	Ovis_aries
ENSXMAG00000009256	ptrh1	77	51.220	ENSPPAG00000041782	PTRH1	96	51.220	Pan_paniscus
ENSXMAG00000009256	ptrh1	72	54.688	ENSPPRG00000007889	PTRH1	90	54.688	Panthera_pardus
ENSXMAG00000009256	ptrh1	77	51.220	ENSPTRG00000021394	PTRH1	96	51.220	Pan_troglodytes
ENSXMAG00000009256	ptrh1	84	42.035	ENSPANG00000031755	PTRH1	98	42.035	Papio_anubis
ENSXMAG00000009256	ptrh1	89	57.872	ENSPKIG00000005449	ptrh1	76	57.872	Paramormyrops_kingsleyae
ENSXMAG00000009256	ptrh1	84	51.121	ENSPSIG00000013828	PTRH1	81	51.121	Pelodiscus_sinensis
ENSXMAG00000009256	ptrh1	83	60.811	ENSPMGG00000002148	ptrh1	87	57.647	Periophthalmus_magnuspinnatus
ENSXMAG00000009256	ptrh1	63	61.677	ENSPEMG00000014360	Ptrh1	94	57.436	Peromyscus_maniculatus_bairdii
ENSXMAG00000009256	ptrh1	100	95.849	ENSPFOG00000003715	ptrh1	100	95.849	Poecilia_formosa
ENSXMAG00000009256	ptrh1	100	89.811	ENSPLAG00000023354	ptrh1	100	89.811	Poecilia_latipinna
ENSXMAG00000009256	ptrh1	100	95.849	ENSPMEG00000000447	ptrh1	100	95.849	Poecilia_mexicana
ENSXMAG00000009256	ptrh1	100	94.340	ENSPREG00000012612	ptrh1	100	94.340	Poecilia_reticulata
ENSXMAG00000009256	ptrh1	77	48.293	ENSPPYG00000019628	PTRH1	89	48.293	Pongo_abelii
ENSXMAG00000009256	ptrh1	69	56.522	ENSPCAG00000007016	PTRH1	86	56.522	Procavia_capensis
ENSXMAG00000009256	ptrh1	72	54.639	ENSPCOG00000014541	PTRH1	90	54.639	Propithecus_coquereli
ENSXMAG00000009256	ptrh1	69	57.065	ENSPVAG00000000954	PTRH1	86	57.065	Pteropus_vampyrus
ENSXMAG00000009256	ptrh1	98	76.981	ENSPNYG00000007789	ptrh1	95	76.981	Pundamilia_nyererei
ENSXMAG00000009256	ptrh1	97	60.853	ENSPNAG00000029930	ptrh1	95	60.853	Pygocentrus_nattereri
ENSXMAG00000009256	ptrh1	69	57.692	ENSRNOG00000049034	Ptrh1	89	57.692	Rattus_norvegicus
ENSXMAG00000009256	ptrh1	84	49.099	ENSRBIG00000027290	PTRH1	98	49.099	Rhinopithecus_bieti
ENSXMAG00000009256	ptrh1	84	49.099	ENSRROG00000028799	PTRH1	92	49.099	Rhinopithecus_roxellana
ENSXMAG00000009256	ptrh1	67	33.333	YHR189W	PTH1	97	33.333	Saccharomyces_cerevisiae
ENSXMAG00000009256	ptrh1	77	51.220	ENSSBOG00000026699	PTRH1	90	51.220	Saimiri_boliviensis_boliviensis
ENSXMAG00000009256	ptrh1	72	54.315	ENSSHAG00000018238	PTRH1	96	54.315	Sarcophilus_harrisii
ENSXMAG00000009256	ptrh1	78	62.019	ENSSFOG00015007053	ptrh1	84	68.824	Scleropages_formosus
ENSXMAG00000009256	ptrh1	74	77.723	ENSSMAG00000016747	ptrh1	86	77.723	Scophthalmus_maximus
ENSXMAG00000009256	ptrh1	89	74.684	ENSSDUG00000013471	ptrh1	96	78.481	Seriola_dumerili
ENSXMAG00000009256	ptrh1	75	75.000	ENSSLDG00000024662	ptrh1	88	79.500	Seriola_lalandi_dorsalis
ENSXMAG00000009256	ptrh1	85	48.673	ENSSPUG00000000040	PTRH1	93	48.673	Sphenodon_punctatus
ENSXMAG00000009256	ptrh1	87	81.818	ENSSPAG00000003298	ptrh1	96	80.851	Stegastes_partitus
ENSXMAG00000009256	ptrh1	72	54.688	ENSSSCG00000005615	PTRH1	90	54.688	Sus_scrofa
ENSXMAG00000009256	ptrh1	51	58.209	ENSTGUG00000003648	PTRH1	100	58.209	Taeniopygia_guttata
ENSXMAG00000009256	ptrh1	93	75.904	ENSTRUG00000019801	PTRH1	91	75.697	Takifugu_rubripes
ENSXMAG00000009256	ptrh1	83	75.336	ENSTNIG00000016735	ptrh1	99	75.336	Tetraodon_nigroviridis
ENSXMAG00000009256	ptrh1	72	52.083	ENSTTRG00000016458	PTRH1	90	52.083	Tursiops_truncatus
ENSXMAG00000009256	ptrh1	73	54.124	ENSUAMG00000023948	-	86	54.124	Ursus_americanus
ENSXMAG00000009256	ptrh1	69	43.407	ENSVPAG00000001805	PTRH1	100	43.407	Vicugna_pacos
ENSXMAG00000009256	ptrh1	69	54.891	ENSVVUG00000013198	PTRH1	83	54.891	Vulpes_vulpes
ENSXMAG00000009256	ptrh1	67	56.497	ENSXETG00000009980	ptrh1	95	56.497	Xenopus_tropicalis
ENSXMAG00000009256	ptrh1	78	96.117	ENSXCOG00000011498	ptrh1	88	96.117	Xiphophorus_couchianus