EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009274 (Gene tree)
Gene ID: 102233896
Gene Symbol: GFI1 (1 of many)
Alias: GFI-1|GFI1A|ZNF163
Full Name: zinc finger protein Gfi-1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6474 bases
Position: chr6:2868310-2874783
Accession: 102233896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009293	zf-C2H2	PF00096.26	2.7e-15	1	3
ENSXMAP00000009293	zf-C2H2	PF00096.26	2.7e-15	2	3
ENSXMAP00000009293	zf-C2H2	PF00096.26	2.7e-15	3	3
ENSXMAP00000009293	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000009307	GFI1 (1 of many)-201	2333	XM_014475666	ENSXMAP00000009293	490 (aa)	XP_014331152	M4A499

Gene Model

Click here to download ENSXMAG00000009274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009274	GFI1	70	54.933	ENSG00000162676	GFI1	87	54.424	Homo_sapiens
ENSXMAG00000009274	GFI1	70	56.534	ENSAPOG00000015189	gfi1ab	86	54.416	Acanthochromis_polyacanthus
ENSXMAG00000009274	GFI1	70	55.932	ENSACIG00000016354	gfi1ab	85	53.955	Amphilophus_citrinellus
ENSXMAG00000009274	GFI1	70	39.737	ENSAOCG00000008339	gfi1ab	92	36.288	Amphiprion_ocellaris
ENSXMAG00000009274	GFI1	70	56.818	ENSAPEG00000023870	gfi1ab	90	54.441	Amphiprion_percula
ENSXMAG00000009274	GFI1	70	52.571	ENSATEG00000009167	gfi1ab	76	51.149	Anabas_testudineus
ENSXMAG00000009274	GFI1	56	56.228	ENSAPLG00000015700	GFI1	86	59.109	Anas_platyrhynchos
ENSXMAG00000009274	GFI1	70	55.833	ENSACAG00000004498	GFI1	86	54.930	Anolis_carolinensis
ENSXMAG00000009274	GFI1	70	52.185	ENSANAG00000019656	GFI1	87	54.692	Aotus_nancymaae
ENSXMAG00000009274	GFI1	70	55.775	ENSACLG00000026458	gfi1ab	79	53.672	Astatotilapia_calliptera
ENSXMAG00000009274	GFI1	86	47.907	ENSAMXG00000039600	gfi1ab	100	45.455	Astyanax_mexicanus
ENSXMAG00000009274	GFI1	70	52.245	ENSAMXG00000006669	GFI1	97	72.973	Astyanax_mexicanus
ENSXMAG00000009274	GFI1	70	50.636	ENSBTAG00000016723	GFI1	100	53.989	Bos_taurus
ENSXMAG00000009274	GFI1	70	53.158	ENSCJAG00000017609	GFI1	100	53.439	Callithrix_jacchus
ENSXMAG00000009274	GFI1	70	53.125	ENSCAFG00000020155	GFI1	100	53.968	Canis_familiaris
ENSXMAG00000009274	GFI1	70	53.125	ENSCAFG00020013371	GFI1	88	53.968	Canis_lupus_dingo
ENSXMAG00000009274	GFI1	70	51.145	ENSCHIG00000016135	GFI1	100	54.450	Capra_hircus
ENSXMAG00000009274	GFI1	70	54.865	ENSCPOG00000011727	GFI1	100	51.872	Cavia_porcellus
ENSXMAG00000009274	GFI1	70	53.989	ENSCCAG00000036072	GFI1	87	53.619	Cebus_capucinus
ENSXMAG00000009274	GFI1	70	53.684	ENSCATG00000037873	GFI1	87	54.233	Cercocebus_atys
ENSXMAG00000009274	GFI1	62	75.460	ENSCLAG00000005915	GFI1	100	49.096	Chinchilla_lanigera
ENSXMAG00000009274	GFI1	70	53.439	ENSCSAG00000001469	GFI1	100	53.989	Chlorocebus_sabaeus
ENSXMAG00000009274	GFI1	70	53.684	ENSCANG00000034077	GFI1	87	54.497	Colobus_angolensis_palliatus
ENSXMAG00000009274	GFI1	70	52.910	ENSCGRG00001015432	Gfi1	100	51.989	Cricetulus_griseus_chok1gshd
ENSXMAG00000009274	GFI1	70	69.034	ENSCSEG00000017729	GFI1	100	65.909	Cynoglossus_semilaevis
ENSXMAG00000009274	GFI1	70	54.416	ENSCVAG00000011828	gfi1ab	85	53.179	Cyprinodon_variegatus
ENSXMAG00000009274	GFI1	70	80.286	ENSCVAG00000004930	GFI1	100	80.000	Cyprinodon_variegatus
ENSXMAG00000009274	GFI1	70	56.695	ENSDARG00000044457	gfi1ab	86	56.695	Danio_rerio
ENSXMAG00000009274	GFI1	70	51.662	ENSDNOG00000000782	GFI1	97	53.034	Dasypus_novemcinctus
ENSXMAG00000009274	GFI1	70	54.787	ENSEASG00005015509	GFI1	75	54.545	Equus_asinus_asinus
ENSXMAG00000009274	GFI1	70	55.080	ENSECAG00000006647	GFI1	86	54.839	Equus_caballus
ENSXMAG00000009274	GFI1	70	53.226	ENSEEUG00000000198	GFI1	100	52.291	Erinaceus_europaeus
ENSXMAG00000009274	GFI1	70	57.910	ENSELUG00000003015	gfi1ab	99	48.372	Esox_lucius
ENSXMAG00000009274	GFI1	70	59.544	ENSELUG00000019033	GFI1	100	59.544	Esox_lucius
ENSXMAG00000009274	GFI1	70	55.381	ENSFCAG00000005914	GFI1	87	54.424	Felis_catus
ENSXMAG00000009274	GFI1	70	55.618	ENSFHEG00000010997	gfi1ab	86	54.596	Fundulus_heteroclitus
ENSXMAG00000009274	GFI1	70	83.285	ENSFHEG00000000341	GFI1	100	87.608	Fundulus_heteroclitus
ENSXMAG00000009274	GFI1	70	54.441	ENSGMOG00000007737	gfi1ab	100	52.874	Gadus_morhua
ENSXMAG00000009274	GFI1	70	55.191	ENSGALG00000043650	GFI1	86	56.461	Gallus_gallus
ENSXMAG00000009274	GFI1	70	55.742	ENSGAFG00000016637	gfi1ab	86	54.958	Gambusia_affinis
ENSXMAG00000009274	GFI1	70	96.522	ENSGAFG00000018063	GFI1	100	96.522	Gambusia_affinis
ENSXMAG00000009274	GFI1	70	54.958	ENSGACG00000004257	gfi1ab	83	53.693	Gasterosteus_aculeatus
ENSXMAG00000009274	GFI1	70	54.933	ENSGGOG00000005320	GFI1	87	54.424	Gorilla_gorilla
ENSXMAG00000009274	GFI1	70	54.958	ENSHBUG00000011969	gfi1ab	85	54.674	Haplochromis_burtoni
ENSXMAG00000009274	GFI1	76	50.605	ENSHGLG00000008020	GFI1	87	53.067	Heterocephalus_glaber_female
ENSXMAG00000009274	GFI1	76	51.090	ENSHGLG00100000610	GFI1	87	53.067	Heterocephalus_glaber_male
ENSXMAG00000009274	GFI1	70	48.396	ENSHCOG00000008590	gfi1ab	57	55.144	Hippocampus_comes
ENSXMAG00000009274	GFI1	86	53.828	ENSHCOG00000019555	GFI1	100	68.085	Hippocampus_comes
ENSXMAG00000009274	GFI1	70	52.841	ENSIPUG00000013414	GFI1	86	50.430	Ictalurus_punctatus
ENSXMAG00000009274	GFI1	70	54.085	ENSIPUG00000010071	gfi1ab	74	52.113	Ictalurus_punctatus
ENSXMAG00000009274	GFI1	70	53.109	ENSSTOG00000014583	GFI1	100	53.947	Ictidomys_tridecemlineatus
ENSXMAG00000009274	GFI1	70	54.775	ENSKMAG00000003810	gfi1ab	100	51.831	Kryptolebias_marmoratus
ENSXMAG00000009274	GFI1	70	54.416	ENSLBEG00000027776	gfi1ab	86	51.130	Labrus_bergylta
ENSXMAG00000009274	GFI1	70	67.391	ENSLACG00000017590	-	99	67.391	Latimeria_chalumnae
ENSXMAG00000009274	GFI1	70	56.056	ENSLACG00000013362	GFI1	98	55.241	Latimeria_chalumnae
ENSXMAG00000009274	GFI1	70	57.386	ENSLOCG00000004711	gfi1ab	86	57.386	Lepisosteus_oculatus
ENSXMAG00000009274	GFI1	70	55.041	ENSLAFG00000018346	GFI1	86	53.226	Loxodonta_africana
ENSXMAG00000009274	GFI1	70	53.684	ENSMFAG00000045801	GFI1	87	54.233	Macaca_fascicularis
ENSXMAG00000009274	GFI1	70	53.684	ENSMNEG00000036338	GFI1	87	54.233	Macaca_nemestrina
ENSXMAG00000009274	GFI1	70	53.684	ENSMLEG00000036181	GFI1	87	54.233	Mandrillus_leucophaeus
ENSXMAG00000009274	GFI1	70	56.215	ENSMAMG00000008125	gfi1ab	100	55.211	Mastacembelus_armatus
ENSXMAG00000009274	GFI1	70	55.775	ENSMZEG00005009895	gfi1ab	86	53.672	Maylandia_zebra
ENSXMAG00000009274	GFI1	56	57.388	ENSMGAG00000008187	GFI1	90	59.615	Meleagris_gallopavo
ENSXMAG00000009274	GFI1	70	52.865	ENSMICG00000047208	GFI1	87	51.436	Microcebus_murinus
ENSXMAG00000009274	GFI1	70	53.295	ENSMMOG00000005556	gfi1ab	85	51.437	Mola_mola
ENSXMAG00000009274	GFI1	70	55.827	ENSMODG00000011802	GFI1	100	54.133	Monodelphis_domestica
ENSXMAG00000009274	GFI1	70	54.108	ENSMALG00000014672	gfi1ab	85	52.408	Monopterus_albus
ENSXMAG00000009274	GFI1	70	54.133	MGP_CAROLIEiJ_G0027508	Gfi1	94	94.937	Mus_caroli
ENSXMAG00000009274	GFI1	70	53.158	ENSMUSG00000029275	Gfi1	100	53.209	Mus_musculus
ENSXMAG00000009274	GFI1	70	54.787	MGP_PahariEiJ_G0017280	Gfi1	94	94.937	Mus_pahari
ENSXMAG00000009274	GFI1	70	53.743	MGP_SPRETEiJ_G0028507	Gfi1	100	53.209	Mus_spretus
ENSXMAG00000009274	GFI1	70	57.880	ENSMPUG00000004178	GFI1	82	56.125	Mustela_putorius_furo
ENSXMAG00000009274	GFI1	70	53.175	ENSMLUG00000015191	GFI1	97	52.128	Myotis_lucifugus
ENSXMAG00000009274	GFI1	70	56.303	ENSNBRG00000015774	gfi1ab	86	55.337	Neolamprologus_brichardi
ENSXMAG00000009274	GFI1	56	56.954	ENSNLEG00000010470	GFI1	69	58.571	Nomascus_leucogenys
ENSXMAG00000009274	GFI1	70	54.737	ENSOPRG00000001473	GFI1	87	53.562	Ochotona_princeps
ENSXMAG00000009274	GFI1	70	55.775	ENSONIG00000019246	gfi1ab	86	53.740	Oreochromis_niloticus
ENSXMAG00000009274	GFI1	70	53.421	ENSOCUG00000023553	GFI1	93	52.987	Oryctolagus_cuniculus
ENSXMAG00000009274	GFI1	70	68.000	ENSORLG00000005060	GFI1	85	65.706	Oryzias_latipes
ENSXMAG00000009274	GFI1	70	54.701	ENSORLG00000013806	gfi1ab	85	52.691	Oryzias_latipes
ENSXMAG00000009274	GFI1	70	54.416	ENSORLG00020001602	gfi1ab	85	52.691	Oryzias_latipes_hni
ENSXMAG00000009274	GFI1	57	82.051	ENSORLG00020002817	GFI1	83	82.051	Oryzias_latipes_hni
ENSXMAG00000009274	GFI1	70	67.898	ENSORLG00015006070	GFI1	98	64.841	Oryzias_latipes_hsok
ENSXMAG00000009274	GFI1	70	69.452	ENSOMEG00000016722	GFI1	100	69.452	Oryzias_melastigma
ENSXMAG00000009274	GFI1	70	53.258	ENSOGAG00000027913	GFI1	84	52.975	Otolemur_garnettii
ENSXMAG00000009274	GFI1	70	55.143	ENSPPAG00000042186	GFI1	85	54.000	Pan_paniscus
ENSXMAG00000009274	GFI1	70	55.381	ENSPPRG00000007521	GFI1	87	54.424	Panthera_pardus
ENSXMAG00000009274	GFI1	70	54.667	ENSPTRG00000043053	GFI1	87	54.692	Pan_troglodytes
ENSXMAG00000009274	GFI1	70	53.684	ENSPANG00000016433	GFI1	87	54.233	Papio_anubis
ENSXMAG00000009274	GFI1	70	58.028	ENSPKIG00000004263	GFI1	86	53.463	Paramormyrops_kingsleyae
ENSXMAG00000009274	GFI1	60	55.298	ENSPSIG00000008734	GFI1	87	58.621	Pelodiscus_sinensis
ENSXMAG00000009274	GFI1	70	50.145	ENSPMGG00000011041	GFI1	82	49.565	Periophthalmus_magnuspinnatus
ENSXMAG00000009274	GFI1	70	55.014	ENSPMGG00000012546	gfi1ab	85	54.131	Periophthalmus_magnuspinnatus
ENSXMAG00000009274	GFI1	70	57.300	ENSPCIG00000013728	GFI1	87	54.743	Phascolarctos_cinereus
ENSXMAG00000009274	GFI1	70	56.303	ENSPFOG00000023214	gfi1ab	86	53.409	Poecilia_formosa
ENSXMAG00000009274	GFI1	70	94.798	ENSPLAG00000005376	GFI1	91	95.087	Poecilia_latipinna
ENSXMAG00000009274	GFI1	70	58.400	ENSPLAG00000010879	gfi1ab	83	73.684	Poecilia_latipinna
ENSXMAG00000009274	GFI1	70	56.303	ENSPMEG00000013694	gfi1ab	86	55.524	Poecilia_mexicana
ENSXMAG00000009274	GFI1	70	94.783	ENSPMEG00000019299	GFI1	100	94.783	Poecilia_mexicana
ENSXMAG00000009274	GFI1	70	55.742	ENSPREG00000014097	gfi1ab	86	55.241	Poecilia_reticulata
ENSXMAG00000009274	GFI1	70	75.833	ENSPREG00000007997	GFI1	85	81.667	Poecilia_reticulata
ENSXMAG00000009274	GFI1	70	42.971	ENSPCAG00000011020	GFI1	100	43.351	Procavia_capensis
ENSXMAG00000009274	GFI1	70	52.604	ENSPCOG00000020540	GFI1	100	51.697	Propithecus_coquereli
ENSXMAG00000009274	GFI1	70	56.417	ENSPVAG00000006928	GFI1	100	53.125	Pteropus_vampyrus
ENSXMAG00000009274	GFI1	70	55.775	ENSPNYG00000021183	gfi1ab	86	53.672	Pundamilia_nyererei
ENSXMAG00000009274	GFI1	70	50.708	ENSPNAG00000028014	GFI1	100	50.556	Pygocentrus_nattereri
ENSXMAG00000009274	GFI1	86	48.019	ENSPNAG00000027258	gfi1ab	100	45.794	Pygocentrus_nattereri
ENSXMAG00000009274	GFI1	70	54.255	ENSRNOG00000002042	Gfi1	100	52.941	Rattus_norvegicus
ENSXMAG00000009274	GFI1	70	53.684	ENSRBIG00000036467	GFI1	87	54.233	Rhinopithecus_bieti
ENSXMAG00000009274	GFI1	70	53.684	ENSRROG00000031687	GFI1	87	54.233	Rhinopithecus_roxellana
ENSXMAG00000009274	GFI1	70	54.521	ENSSBOG00000031300	GFI1	87	53.619	Saimiri_boliviensis_boliviensis
ENSXMAG00000009274	GFI1	70	59.155	ENSSFOG00015020295	gfi1	100	52.958	Scleropages_formosus
ENSXMAG00000009274	GFI1	70	56.374	ENSSMAG00000002782	gfi1ab	86	55.301	Scophthalmus_maximus
ENSXMAG00000009274	GFI1	72	52.368	ENSSDUG00000022410	gfi1ab	87	50.838	Seriola_dumerili
ENSXMAG00000009274	GFI1	72	52.646	ENSSLDG00000020163	gfi1ab	87	51.117	Seriola_lalandi_dorsalis
ENSXMAG00000009274	GFI1	53	75.758	ENSSPAG00000009140	gfi1ab	81	78.125	Stegastes_partitus
ENSXMAG00000009274	GFI1	70	53.646	ENSSSCG00000006902	GFI1	87	55.228	Sus_scrofa
ENSXMAG00000009274	GFI1	56	57.388	ENSTGUG00000006060	GFI1	73	60.536	Taeniopygia_guttata
ENSXMAG00000009274	GFI1	70	54.598	ENSTRUG00000000415	gfi1ab	85	54.310	Takifugu_rubripes
ENSXMAG00000009274	GFI1	70	51.944	ENSTNIG00000000651	gfi1ab	83	51.667	Tetraodon_nigroviridis
ENSXMAG00000009274	GFI1	70	54.907	ENSTTRG00000000082	GFI1	87	54.111	Tursiops_truncatus
ENSXMAG00000009274	GFI1	70	52.895	ENSUAMG00000021124	GFI1	91	53.930	Ursus_americanus
ENSXMAG00000009274	GFI1	70	53.352	ENSXETG00000023006	gfi1	84	52.691	Xenopus_tropicalis
ENSXMAG00000009274	GFI1	70	55.462	ENSXMAG00000010523	gfi1ab	86	54.674	Xiphophorus_maculatus