EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009387 (Gene tree)
Gene ID: 102224954
Gene Symbol: rab23
Alias: zgc:110261
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6210 bases
Position: chr22:12105935-12112144
Accession: 102224954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009411	MMR_HSR1	PF01926.23	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000009425	-	1188	XM_005807622	ENSXMAP00000009411	235 (aa)	XP_005807679	M4A4L7

Gene Model

Click here to download ENSXMAG00000009387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009387	rab23	99	82.203	ENSG00000112210	RAB23	99	82.203	Homo_sapiens
ENSXMAG00000009387	rab23	100	94.894	ENSAPOG00000008892	rab23	100	94.894	Acanthochromis_polyacanthus
ENSXMAG00000009387	rab23	99	81.780	ENSAMEG00000006825	RAB23	99	81.780	Ailuropoda_melanoleuca
ENSXMAG00000009387	rab23	100	82.553	ENSACIG00000020496	rab23	100	82.553	Amphilophus_citrinellus
ENSXMAG00000009387	rab23	100	95.319	ENSAOCG00000004234	rab23	100	95.319	Amphiprion_ocellaris
ENSXMAG00000009387	rab23	100	95.319	ENSAPEG00000019758	rab23	100	95.319	Amphiprion_percula
ENSXMAG00000009387	rab23	100	95.745	ENSATEG00000020913	rab23	100	95.745	Anabas_testudineus
ENSXMAG00000009387	rab23	75	89.831	ENSAPLG00000003715	RAB23	100	89.831	Anas_platyrhynchos
ENSXMAG00000009387	rab23	99	78.059	ENSACAG00000006656	RAB23	99	78.059	Anolis_carolinensis
ENSXMAG00000009387	rab23	99	82.203	ENSANAG00000027052	-	99	82.203	Aotus_nancymaae
ENSXMAG00000009387	rab23	100	94.043	ENSACLG00000002819	rab23	100	94.043	Astatotilapia_calliptera
ENSXMAG00000009387	rab23	100	86.920	ENSAMXG00000014960	rab23	100	86.920	Astyanax_mexicanus
ENSXMAG00000009387	rab23	99	80.932	ENSBTAG00000005362	RAB23	99	80.932	Bos_taurus
ENSXMAG00000009387	rab23	99	82.203	ENSCJAG00000010247	RAB23	99	82.203	Callithrix_jacchus
ENSXMAG00000009387	rab23	99	82.203	ENSCAFG00000002459	RAB23	99	82.203	Canis_familiaris
ENSXMAG00000009387	rab23	99	82.203	ENSCAFG00020015900	RAB23	99	82.203	Canis_lupus_dingo
ENSXMAG00000009387	rab23	99	80.932	ENSCHIG00000009815	RAB23	99	80.932	Capra_hircus
ENSXMAG00000009387	rab23	100	81.857	ENSTSYG00000029126	RAB23	100	81.857	Carlito_syrichta
ENSXMAG00000009387	rab23	99	81.277	ENSCPOG00000030218	RAB23	99	81.277	Cavia_porcellus
ENSXMAG00000009387	rab23	99	81.780	ENSCCAG00000020364	RAB23	99	81.780	Cebus_capucinus
ENSXMAG00000009387	rab23	99	82.627	ENSCATG00000027876	RAB23	99	82.627	Cercocebus_atys
ENSXMAG00000009387	rab23	99	81.780	ENSCLAG00000000797	RAB23	99	81.780	Chinchilla_lanigera
ENSXMAG00000009387	rab23	99	82.627	ENSCSAG00000013438	RAB23	99	82.627	Chlorocebus_sabaeus
ENSXMAG00000009387	rab23	99	81.780	ENSCPBG00000022640	RAB23	99	81.356	Chrysemys_picta_bellii
ENSXMAG00000009387	rab23	100	66.255	ENSCING00000001155	-	100	67.078	Ciona_intestinalis
ENSXMAG00000009387	rab23	100	63.485	ENSCSAVG00000001356	-	100	63.636	Ciona_savignyi
ENSXMAG00000009387	rab23	99	82.203	ENSCANG00000031065	RAB23	99	82.203	Colobus_angolensis_palliatus
ENSXMAG00000009387	rab23	99	82.203	ENSCGRG00001008994	Rab23	99	82.203	Cricetulus_griseus_chok1gshd
ENSXMAG00000009387	rab23	99	81.277	ENSCGRG00000013630	Rab23	99	81.277	Cricetulus_griseus_crigri
ENSXMAG00000009387	rab23	100	81.702	ENSCSEG00000010565	rab23	100	81.702	Cynoglossus_semilaevis
ENSXMAG00000009387	rab23	100	94.043	ENSCVAG00000020501	rab23	100	94.043	Cyprinodon_variegatus
ENSXMAG00000009387	rab23	100	86.076	ENSDARG00000004151	rab23	100	86.076	Danio_rerio
ENSXMAG00000009387	rab23	99	80.932	ENSDNOG00000015501	RAB23	99	80.932	Dasypus_novemcinctus
ENSXMAG00000009387	rab23	100	79.747	ENSDORG00000028344	Rab23	100	79.747	Dipodomys_ordii
ENSXMAG00000009387	rab23	94	61.233	FBgn0037364	Rab23	82	61.233	Drosophila_melanogaster
ENSXMAG00000009387	rab23	96	64.783	ENSEBUG00000010861	-	91	64.783	Eptatretus_burgeri
ENSXMAG00000009387	rab23	99	82.203	ENSEASG00005003529	RAB23	99	82.203	Equus_asinus_asinus
ENSXMAG00000009387	rab23	99	82.203	ENSECAG00000013427	RAB23	99	82.203	Equus_caballus
ENSXMAG00000009387	rab23	100	81.013	ENSEEUG00000015045	RAB23	100	81.013	Erinaceus_europaeus
ENSXMAG00000009387	rab23	99	88.793	ENSELUG00000020788	rab23	99	88.793	Esox_lucius
ENSXMAG00000009387	rab23	99	82.203	ENSFCAG00000044358	RAB23	99	82.203	Felis_catus
ENSXMAG00000009387	rab23	99	80.932	ENSFALG00000001708	RAB23	99	80.932	Ficedula_albicollis
ENSXMAG00000009387	rab23	99	81.780	ENSFDAG00000014834	RAB23	99	81.780	Fukomys_damarensis
ENSXMAG00000009387	rab23	100	97.447	ENSFHEG00000023069	rab23	100	97.447	Fundulus_heteroclitus
ENSXMAG00000009387	rab23	100	90.638	ENSGMOG00000005102	rab23	100	90.638	Gadus_morhua
ENSXMAG00000009387	rab23	99	82.203	ENSGALG00000016279	RAB23	99	82.203	Gallus_gallus
ENSXMAG00000009387	rab23	100	99.574	ENSGAFG00000007684	rab23	100	99.574	Gambusia_affinis
ENSXMAG00000009387	rab23	100	94.043	ENSGACG00000006151	rab23	100	94.043	Gasterosteus_aculeatus
ENSXMAG00000009387	rab23	99	81.356	ENSGAGG00000012709	RAB23	99	80.932	Gopherus_agassizii
ENSXMAG00000009387	rab23	100	81.702	ENSHBUG00000007966	rab23	100	81.702	Haplochromis_burtoni
ENSXMAG00000009387	rab23	99	67.917	ENSHGLG00000009371	-	99	67.083	Heterocephalus_glaber_female
ENSXMAG00000009387	rab23	99	83.051	ENSHGLG00000013030	-	99	83.051	Heterocephalus_glaber_female
ENSXMAG00000009387	rab23	99	67.917	ENSHGLG00100017177	-	99	67.083	Heterocephalus_glaber_male
ENSXMAG00000009387	rab23	99	83.051	ENSHGLG00100005945	-	99	83.051	Heterocephalus_glaber_male
ENSXMAG00000009387	rab23	100	80.000	ENSHCOG00000013919	rab23	100	80.000	Hippocampus_comes
ENSXMAG00000009387	rab23	100	74.684	ENSIPUG00000016494	rab23	100	74.684	Ictalurus_punctatus
ENSXMAG00000009387	rab23	99	81.356	ENSSTOG00000010962	RAB23	99	81.356	Ictidomys_tridecemlineatus
ENSXMAG00000009387	rab23	99	81.780	ENSJJAG00000020094	Rab23	99	81.780	Jaculus_jaculus
ENSXMAG00000009387	rab23	100	94.894	ENSKMAG00000018270	rab23	100	94.894	Kryptolebias_marmoratus
ENSXMAG00000009387	rab23	99	94.872	ENSLBEG00000013176	rab23	99	94.872	Labrus_bergylta
ENSXMAG00000009387	rab23	100	83.122	ENSLACG00000004025	RAB23	100	83.122	Latimeria_chalumnae
ENSXMAG00000009387	rab23	100	83.750	ENSLOCG00000016999	rab23	100	83.333	Lepisosteus_oculatus
ENSXMAG00000009387	rab23	99	82.627	ENSLAFG00000007209	RAB23	99	82.627	Loxodonta_africana
ENSXMAG00000009387	rab23	99	82.627	ENSMFAG00000032369	RAB23	99	82.627	Macaca_fascicularis
ENSXMAG00000009387	rab23	99	82.627	ENSMMUG00000018003	RAB23	99	82.627	Macaca_mulatta
ENSXMAG00000009387	rab23	99	82.627	ENSMNEG00000037012	RAB23	99	82.627	Macaca_nemestrina
ENSXMAG00000009387	rab23	99	82.627	ENSMLEG00000042429	RAB23	99	82.627	Mandrillus_leucophaeus
ENSXMAG00000009387	rab23	100	94.468	ENSMAMG00000015456	rab23	100	94.468	Mastacembelus_armatus
ENSXMAG00000009387	rab23	100	94.043	ENSMZEG00005005441	rab23	100	94.043	Maylandia_zebra
ENSXMAG00000009387	rab23	99	81.780	ENSMGAG00000013882	RAB23	99	81.780	Meleagris_gallopavo
ENSXMAG00000009387	rab23	99	83.051	ENSMICG00000014037	RAB23	99	83.051	Microcebus_murinus
ENSXMAG00000009387	rab23	99	81.780	ENSMOCG00000000444	Rab23	99	81.780	Microtus_ochrogaster
ENSXMAG00000009387	rab23	100	82.553	ENSMMOG00000007703	rab23	100	82.553	Mola_mola
ENSXMAG00000009387	rab23	99	81.780	ENSMODG00000018720	RAB23	99	81.780	Monodelphis_domestica
ENSXMAG00000009387	rab23	100	92.766	ENSMALG00000002136	rab23	100	92.766	Monopterus_albus
ENSXMAG00000009387	rab23	99	80.508	MGP_CAROLIEiJ_G0014015	Rab23	99	80.508	Mus_caroli
ENSXMAG00000009387	rab23	99	80.085	ENSMUSG00000004768	Rab23	99	80.085	Mus_musculus
ENSXMAG00000009387	rab23	99	79.661	MGP_PahariEiJ_G0027261	Rab23	99	79.661	Mus_pahari
ENSXMAG00000009387	rab23	99	80.085	MGP_SPRETEiJ_G0014820	Rab23	99	80.085	Mus_spretus
ENSXMAG00000009387	rab23	99	73.418	ENSMPUG00000002642	RAB23	99	73.418	Mustela_putorius_furo
ENSXMAG00000009387	rab23	99	83.051	ENSMLUG00000004058	RAB23	99	83.051	Myotis_lucifugus
ENSXMAG00000009387	rab23	99	81.780	ENSNGAG00000018038	Rab23	99	81.780	Nannospalax_galili
ENSXMAG00000009387	rab23	100	94.043	ENSNBRG00000013691	rab23	100	94.043	Neolamprologus_brichardi
ENSXMAG00000009387	rab23	99	82.627	ENSNLEG00000027830	RAB23	99	82.627	Nomascus_leucogenys
ENSXMAG00000009387	rab23	99	80.508	ENSODEG00000016056	RAB23	99	80.508	Octodon_degus
ENSXMAG00000009387	rab23	100	94.068	ENSONIG00000009749	rab23	100	94.068	Oreochromis_niloticus
ENSXMAG00000009387	rab23	99	82.203	ENSOANG00000001398	RAB23	99	82.203	Ornithorhynchus_anatinus
ENSXMAG00000009387	rab23	99	82.627	ENSOCUG00000004816	RAB23	99	82.627	Oryctolagus_cuniculus
ENSXMAG00000009387	rab23	100	90.638	ENSORLG00000010115	rab23	100	90.638	Oryzias_latipes
ENSXMAG00000009387	rab23	100	90.638	ENSORLG00020020220	rab23	100	90.638	Oryzias_latipes_hni
ENSXMAG00000009387	rab23	100	90.638	ENSORLG00015004033	rab23	100	90.638	Oryzias_latipes_hsok
ENSXMAG00000009387	rab23	100	91.915	ENSOMEG00000001706	rab23	100	91.915	Oryzias_melastigma
ENSXMAG00000009387	rab23	99	81.780	ENSOGAG00000005675	RAB23	99	81.780	Otolemur_garnettii
ENSXMAG00000009387	rab23	99	80.932	ENSOARG00000005749	RAB23	99	80.932	Ovis_aries
ENSXMAG00000009387	rab23	99	82.203	ENSPPAG00000010023	RAB23	99	82.203	Pan_paniscus
ENSXMAG00000009387	rab23	99	81.780	ENSPPRG00000012453	RAB23	99	81.780	Panthera_pardus
ENSXMAG00000009387	rab23	99	82.203	ENSPTIG00000009435	RAB23	99	82.203	Panthera_tigris_altaica
ENSXMAG00000009387	rab23	99	82.627	ENSPTRG00000043341	RAB23	99	82.627	Pan_troglodytes
ENSXMAG00000009387	rab23	99	82.627	ENSPANG00000017772	RAB23	99	82.627	Papio_anubis
ENSXMAG00000009387	rab23	86	83.582	ENSPKIG00000024310	rab23	99	83.582	Paramormyrops_kingsleyae
ENSXMAG00000009387	rab23	99	81.356	ENSPSIG00000015579	RAB23	99	80.932	Pelodiscus_sinensis
ENSXMAG00000009387	rab23	100	78.298	ENSPMGG00000008577	rab23	100	78.298	Periophthalmus_magnuspinnatus
ENSXMAG00000009387	rab23	99	81.356	ENSPEMG00000023271	Rab23	99	81.356	Peromyscus_maniculatus_bairdii
ENSXMAG00000009387	rab23	100	67.660	ENSPMAG00000006835	-	100	67.660	Petromyzon_marinus
ENSXMAG00000009387	rab23	99	80.932	ENSPCIG00000007267	RAB23	99	80.932	Phascolarctos_cinereus
ENSXMAG00000009387	rab23	100	99.574	ENSPFOG00000011493	rab23	100	99.574	Poecilia_formosa
ENSXMAG00000009387	rab23	100	99.149	ENSPLAG00000011697	rab23	100	99.149	Poecilia_latipinna
ENSXMAG00000009387	rab23	100	99.149	ENSPMEG00000017300	rab23	100	99.149	Poecilia_mexicana
ENSXMAG00000009387	rab23	100	85.957	ENSPREG00000022509	rab23	100	85.957	Poecilia_reticulata
ENSXMAG00000009387	rab23	99	82.627	ENSPPYG00000016739	RAB23	99	82.627	Pongo_abelii
ENSXMAG00000009387	rab23	99	82.627	ENSPCOG00000028471	RAB23	99	82.627	Propithecus_coquereli
ENSXMAG00000009387	rab23	99	73.305	ENSPVAG00000017693	RAB23	99	73.305	Pteropus_vampyrus
ENSXMAG00000009387	rab23	100	94.043	ENSPNYG00000019639	rab23	100	94.043	Pundamilia_nyererei
ENSXMAG00000009387	rab23	100	86.920	ENSPNAG00000024728	rab23	100	86.920	Pygocentrus_nattereri
ENSXMAG00000009387	rab23	99	81.356	ENSRNOG00000012629	Rab23	99	81.356	Rattus_norvegicus
ENSXMAG00000009387	rab23	99	77.593	ENSRBIG00000030547	RAB23	99	77.593	Rhinopithecus_bieti
ENSXMAG00000009387	rab23	99	82.627	ENSRROG00000035920	RAB23	99	82.627	Rhinopithecus_roxellana
ENSXMAG00000009387	rab23	99	81.780	ENSSBOG00000033237	RAB23	99	81.780	Saimiri_boliviensis_boliviensis
ENSXMAG00000009387	rab23	99	80.932	ENSSHAG00000006379	RAB23	99	80.932	Sarcophilus_harrisii
ENSXMAG00000009387	rab23	100	87.342	ENSSFOG00015012604	rab23	100	87.342	Scleropages_formosus
ENSXMAG00000009387	rab23	99	95.299	ENSSMAG00000006341	rab23	99	95.299	Scophthalmus_maximus
ENSXMAG00000009387	rab23	100	95.745	ENSSDUG00000023508	rab23	100	95.745	Seriola_dumerili
ENSXMAG00000009387	rab23	100	95.745	ENSSLDG00000000287	rab23	100	95.745	Seriola_lalandi_dorsalis
ENSXMAG00000009387	rab23	99	80.932	ENSSARG00000013689	RAB23	99	80.932	Sorex_araneus
ENSXMAG00000009387	rab23	99	83.051	ENSSPUG00000006274	RAB23	99	83.051	Sphenodon_punctatus
ENSXMAG00000009387	rab23	100	95.319	ENSSPAG00000010373	rab23	100	95.319	Stegastes_partitus
ENSXMAG00000009387	rab23	99	80.508	ENSSSCG00000029539	RAB23	99	80.508	Sus_scrofa
ENSXMAG00000009387	rab23	99	81.356	ENSTGUG00000012794	RAB23	99	81.356	Taeniopygia_guttata
ENSXMAG00000009387	rab23	100	91.064	ENSTRUG00000015697	rab23	100	91.064	Takifugu_rubripes
ENSXMAG00000009387	rab23	100	91.064	ENSTNIG00000016575	rab23	100	91.064	Tetraodon_nigroviridis
ENSXMAG00000009387	rab23	99	82.203	ENSUAMG00000013367	RAB23	99	82.203	Ursus_americanus
ENSXMAG00000009387	rab23	99	82.203	ENSUMAG00000018629	RAB23	99	82.203	Ursus_maritimus
ENSXMAG00000009387	rab23	81	63.874	ENSVPAG00000006805	RAB23	100	63.874	Vicugna_pacos
ENSXMAG00000009387	rab23	99	82.627	ENSVVUG00000008535	RAB23	99	82.627	Vulpes_vulpes
ENSXMAG00000009387	rab23	99	76.793	ENSXETG00000004449	rab23	99	76.793	Xenopus_tropicalis
ENSXMAG00000009387	rab23	100	99.574	ENSXCOG00000011864	rab23	100	99.574	Xiphophorus_couchianus