EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009402 (Gene tree)
Gene ID: 102235547
Gene Symbol: gars
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycyl-tRNA synthetase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 7896 bases
Position: chr21:10277079-10284974
Accession: 102235547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009441	HGTP_anticodon	PF03129.20	8.1e-22	1	1
ENSXMAP00000009441	tRNA-synt_2b	PF00587.25	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000009455	-	2298	XM_005797827	ENSXMAP00000009441	765 (aa)	XP_005797884	M4A4P7

Gene Model

Click here to download ENSXMAG00000009402's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009402	gars	93	84.011	ENSG00000106105	GARS	99	81.358	Homo_sapiens
ENSXMAG00000009402	gars	98	91.733	ENSAPOG00000019999	gars	100	91.733	Acanthochromis_polyacanthus
ENSXMAG00000009402	gars	89	82.500	ENSAPOG00000020089	gars	99	82.500	Acanthochromis_polyacanthus
ENSXMAG00000009402	gars	94	84.240	ENSAMEG00000006652	GARS	99	82.243	Ailuropoda_melanoleuca
ENSXMAG00000009402	gars	88	85.481	ENSACIG00000020797	gars	99	85.481	Amphilophus_citrinellus
ENSXMAG00000009402	gars	98	90.800	ENSACIG00000020744	gars	100	90.800	Amphilophus_citrinellus
ENSXMAG00000009402	gars	98	92.400	ENSAOCG00000009108	gars	100	92.400	Amphiprion_ocellaris
ENSXMAG00000009402	gars	67	87.059	ENSAOCG00000002479	gars	100	87.059	Amphiprion_ocellaris
ENSXMAG00000009402	gars	89	82.941	ENSAPEG00000018903	gars	99	82.941	Amphiprion_percula
ENSXMAG00000009402	gars	98	92.000	ENSAPEG00000018850	gars	100	92.000	Amphiprion_percula
ENSXMAG00000009402	gars	98	90.514	ENSATEG00000008784	gars	100	94.234	Anabas_testudineus
ENSXMAG00000009402	gars	61	88.362	ENSAPLG00000015638	-	100	88.362	Anas_platyrhynchos
ENSXMAG00000009402	gars	89	85.862	ENSACAG00000005601	GARS	99	85.862	Anolis_carolinensis
ENSXMAG00000009402	gars	95	82.240	ENSANAG00000022536	GARS	100	86.715	Aotus_nancymaae
ENSXMAG00000009402	gars	98	90.267	ENSACLG00000027174	gars	100	90.267	Astatotilapia_calliptera
ENSXMAG00000009402	gars	88	83.776	ENSACLG00000027158	gars	99	83.776	Astatotilapia_calliptera
ENSXMAG00000009402	gars	98	80.293	ENSAMXG00000014895	gars	96	90.620	Astyanax_mexicanus
ENSXMAG00000009402	gars	91	85.324	ENSBTAG00000018972	GARS	100	81.867	Bos_taurus
ENSXMAG00000009402	gars	89	56.471	WBGene00001744	gars-1	99	56.637	Caenorhabditis_elegans
ENSXMAG00000009402	gars	93	84.056	ENSCJAG00000008595	GARS	97	83.679	Callithrix_jacchus
ENSXMAG00000009402	gars	89	86.618	ENSCAFG00000003086	GARS	91	81.452	Canis_familiaris
ENSXMAG00000009402	gars	89	86.618	ENSCAFG00020004272	GARS	98	86.618	Canis_lupus_dingo
ENSXMAG00000009402	gars	93	82.657	ENSCHIG00000016912	GARS	100	87.338	Capra_hircus
ENSXMAG00000009402	gars	93	84.540	ENSTSYG00000008538	GARS	99	82.072	Carlito_syrichta
ENSXMAG00000009402	gars	82	68.671	ENSCAPG00000007526	GARS	100	68.671	Cavia_aperea
ENSXMAG00000009402	gars	87	86.697	ENSCPOG00000007547	GARS	100	80.403	Cavia_porcellus
ENSXMAG00000009402	gars	93	84.594	ENSCCAG00000011512	GARS	99	82.685	Cebus_capucinus
ENSXMAG00000009402	gars	93	84.454	ENSCATG00000036699	GARS	99	82.243	Cercocebus_atys
ENSXMAG00000009402	gars	90	86.880	ENSCLAG00000007985	GARS	96	86.880	Chinchilla_lanigera
ENSXMAG00000009402	gars	93	84.314	ENSCSAG00000014588	GARS	99	82.109	Chlorocebus_sabaeus
ENSXMAG00000009402	gars	90	74.636	ENSCHOG00000003253	GARS	99	69.709	Choloepus_hoffmanni
ENSXMAG00000009402	gars	87	87.838	ENSCPBG00000019482	GARS	91	87.838	Chrysemys_picta_bellii
ENSXMAG00000009402	gars	88	63.314	ENSCING00000008937	-	100	63.314	Ciona_intestinalis
ENSXMAG00000009402	gars	93	84.034	ENSCANG00000027727	GARS	99	81.842	Colobus_angolensis_palliatus
ENSXMAG00000009402	gars	96	82.880	ENSCGRG00001020450	Gars	100	82.880	Cricetulus_griseus_chok1gshd
ENSXMAG00000009402	gars	87	88.138	ENSCGRG00000008342	Gars	94	88.138	Cricetulus_griseus_crigri
ENSXMAG00000009402	gars	88	78.319	ENSCSEG00000017654	gars	98	78.319	Cynoglossus_semilaevis
ENSXMAG00000009402	gars	98	90.146	ENSCSEG00000017671	gars	100	90.146	Cynoglossus_semilaevis
ENSXMAG00000009402	gars	98	95.073	ENSCVAG00000007149	gars	100	95.073	Cyprinodon_variegatus
ENSXMAG00000009402	gars	90	92.330	ENSDARG00000059070	gars	100	92.330	Danio_rerio
ENSXMAG00000009402	gars	98	82.109	ENSDNOG00000046478	GARS	100	88.012	Dasypus_novemcinctus
ENSXMAG00000009402	gars	90	85.839	ENSDORG00000002672	Gars	98	83.287	Dipodomys_ordii
ENSXMAG00000009402	gars	89	60.294	FBgn0027088	GlyRS	100	60.294	Drosophila_melanogaster
ENSXMAG00000009402	gars	82	84.102	ENSETEG00000012196	GARS	98	84.102	Echinops_telfairi
ENSXMAG00000009402	gars	72	72.131	ENSEBUG00000002254	gars	100	72.131	Eptatretus_burgeri
ENSXMAG00000009402	gars	63	73.706	ENSEBUG00000002654	gars	87	73.706	Eptatretus_burgeri
ENSXMAG00000009402	gars	90	86.831	ENSEASG00005000388	GARS	99	82.400	Equus_asinus_asinus
ENSXMAG00000009402	gars	90	86.975	ENSECAG00000019373	GARS	99	82.533	Equus_caballus
ENSXMAG00000009402	gars	98	87.350	ENSELUG00000003692	gars	100	87.350	Esox_lucius
ENSXMAG00000009402	gars	90	87.026	ENSFCAG00000011415	GARS	86	81.915	Felis_catus
ENSXMAG00000009402	gars	81	86.688	ENSFALG00000006550	GARS	100	86.688	Ficedula_albicollis
ENSXMAG00000009402	gars	87	87.669	ENSFDAG00000014466	GARS	100	87.669	Fukomys_damarensis
ENSXMAG00000009402	gars	98	94.415	ENSFHEG00000013189	gars	100	94.415	Fundulus_heteroclitus
ENSXMAG00000009402	gars	98	84.379	ENSGMOG00000010728	gars	100	84.379	Gadus_morhua
ENSXMAG00000009402	gars	82	79.968	ENSGMOG00000008856	-	100	79.968	Gadus_morhua
ENSXMAG00000009402	gars	90	86.317	ENSGALG00000005694	GARS	99	87.040	Gallus_gallus
ENSXMAG00000009402	gars	98	98.668	ENSGAFG00000005228	gars	100	98.668	Gambusia_affinis
ENSXMAG00000009402	gars	98	89.067	ENSGACG00000003410	gars	100	89.067	Gasterosteus_aculeatus
ENSXMAG00000009402	gars	81	88.655	ENSGAGG00000017755	GARS	99	88.655	Gopherus_agassizii
ENSXMAG00000009402	gars	93	84.270	ENSGGOG00000004916	GARS	99	81.600	Gorilla_gorilla
ENSXMAG00000009402	gars	98	90.533	ENSHBUG00000016481	gars	100	90.533	Haplochromis_burtoni
ENSXMAG00000009402	gars	88	83.333	ENSHBUG00000000815	gars	99	83.333	Haplochromis_burtoni
ENSXMAG00000009402	gars	90	87.172	ENSHGLG00000016342	GARS	100	82.861	Heterocephalus_glaber_female
ENSXMAG00000009402	gars	90	86.152	ENSHGLG00100006787	GARS	97	86.152	Heterocephalus_glaber_male
ENSXMAG00000009402	gars	51	65.140	ENSHCOG00000005286	gars	96	70.370	Hippocampus_comes
ENSXMAG00000009402	gars	89	88.450	ENSHCOG00000005261	gars	99	88.450	Hippocampus_comes
ENSXMAG00000009402	gars	98	80.908	ENSIPUG00000011443	gars	100	80.908	Ictalurus_punctatus
ENSXMAG00000009402	gars	90	85.859	ENSSTOG00000015493	GARS	94	82.806	Ictidomys_tridecemlineatus
ENSXMAG00000009402	gars	90	86.297	ENSJJAG00000022474	Gars	99	86.297	Jaculus_jaculus
ENSXMAG00000009402	gars	98	90.040	ENSKMAG00000010428	gars	100	90.040	Kryptolebias_marmoratus
ENSXMAG00000009402	gars	98	91.600	ENSLBEG00000019228	gars	100	91.600	Labrus_bergylta
ENSXMAG00000009402	gars	88	84.615	ENSLBEG00000019179	gars	100	84.615	Labrus_bergylta
ENSXMAG00000009402	gars	51	81.959	ENSLBEG00000013122	-	100	81.959	Labrus_bergylta
ENSXMAG00000009402	gars	68	86.731	ENSLACG00000002810	GARS	100	86.731	Latimeria_chalumnae
ENSXMAG00000009402	gars	98	85.923	ENSLOCG00000009688	gars	99	85.923	Lepisosteus_oculatus
ENSXMAG00000009402	gars	98	80.826	ENSLAFG00000002496	GARS	99	85.174	Loxodonta_africana
ENSXMAG00000009402	gars	93	84.454	ENSMFAG00000038863	GARS	99	82.243	Macaca_fascicularis
ENSXMAG00000009402	gars	93	84.454	ENSMMUG00000004719	GARS	99	82.243	Macaca_mulatta
ENSXMAG00000009402	gars	93	78.291	ENSMNEG00000043203	GARS	99	76.368	Macaca_nemestrina
ENSXMAG00000009402	gars	93	84.594	ENSMLEG00000044430	GARS	99	82.377	Mandrillus_leucophaeus
ENSXMAG00000009402	gars	96	90.379	ENSMAMG00000001894	gars	99	92.954	Mastacembelus_armatus
ENSXMAG00000009402	gars	98	90.267	ENSMZEG00005019740	gars	100	90.267	Maylandia_zebra
ENSXMAG00000009402	gars	88	84.296	ENSMZEG00005019754	gars	99	84.296	Maylandia_zebra
ENSXMAG00000009402	gars	97	81.477	ENSMGAG00000003162	GARS	98	81.477	Meleagris_gallopavo
ENSXMAG00000009402	gars	96	82.834	ENSMAUG00000016852	Gars	100	82.834	Mesocricetus_auratus
ENSXMAG00000009402	gars	90	87.153	ENSMICG00000046006	GARS	100	87.153	Microcebus_murinus
ENSXMAG00000009402	gars	95	83.220	ENSMOCG00000017680	Gars	99	83.220	Microtus_ochrogaster
ENSXMAG00000009402	gars	98	86.170	ENSMMOG00000009695	gars	100	86.170	Mola_mola
ENSXMAG00000009402	gars	99	89.815	ENSMALG00000006592	gars	93	89.815	Monopterus_albus
ENSXMAG00000009402	gars	89	87.482	MGP_CAROLIEiJ_G0028410	Gars	93	87.482	Mus_caroli
ENSXMAG00000009402	gars	96	82.993	ENSMUSG00000029777	Gars	100	82.993	Mus_musculus
ENSXMAG00000009402	gars	96	82.449	MGP_PahariEiJ_G0022160	Gars	100	82.449	Mus_pahari
ENSXMAG00000009402	gars	89	87.482	MGP_SPRETEiJ_G0029412	Gars	99	86.923	Mus_spretus
ENSXMAG00000009402	gars	90	87.318	ENSMPUG00000005116	GARS	99	82.072	Mustela_putorius_furo
ENSXMAG00000009402	gars	90	86.735	ENSMLUG00000002043	GARS	97	84.056	Myotis_lucifugus
ENSXMAG00000009402	gars	89	86.969	ENSNGAG00000021844	Gars	94	86.969	Nannospalax_galili
ENSXMAG00000009402	gars	51	83.033	ENSNBRG00000018643	gars	100	83.033	Neolamprologus_brichardi
ENSXMAG00000009402	gars	98	90.667	ENSNBRG00000018585	gars	100	90.667	Neolamprologus_brichardi
ENSXMAG00000009402	gars	93	84.831	ENSNLEG00000015152	GARS	99	82.133	Nomascus_leucogenys
ENSXMAG00000009402	gars	87	78.464	ENSMEUG00000001741	GARS	100	78.464	Notamacropus_eugenii
ENSXMAG00000009402	gars	82	87.755	ENSOPRG00000005342	GARS	83	87.755	Ochotona_princeps
ENSXMAG00000009402	gars	90	85.818	ENSODEG00000008246	GARS	87	85.818	Octodon_degus
ENSXMAG00000009402	gars	87	82.687	ENSOANG00000006262	GARS	91	82.687	Ornithorhynchus_anatinus
ENSXMAG00000009402	gars	90	86.715	ENSOCUG00000005295	GARS	100	86.715	Oryctolagus_cuniculus
ENSXMAG00000009402	gars	98	88.564	ENSORLG00000009470	gars	100	88.564	Oryzias_latipes
ENSXMAG00000009402	gars	93	89.577	ENSORLG00020013036	gars	100	90.452	Oryzias_latipes_hni
ENSXMAG00000009402	gars	98	89.333	ENSORLG00015012886	gars	100	89.333	Oryzias_latipes_hsok
ENSXMAG00000009402	gars	51	83.503	ENSOMEG00000000133	gars	100	83.503	Oryzias_melastigma
ENSXMAG00000009402	gars	98	80.611	ENSOGAG00000013321	GARS	99	80.611	Otolemur_garnettii
ENSXMAG00000009402	gars	91	84.748	ENSOARG00000008017	GARS	99	80.027	Ovis_aries
ENSXMAG00000009402	gars	93	84.432	ENSPPAG00000037266	GARS	100	82.124	Pan_paniscus
ENSXMAG00000009402	gars	90	87.026	ENSPPRG00000001917	GARS	100	82.297	Panthera_pardus
ENSXMAG00000009402	gars	89	87.776	ENSPTIG00000016096	GARS	99	87.776	Panthera_tigris_altaica
ENSXMAG00000009402	gars	93	84.432	ENSPTRG00000019042	GARS	100	82.013	Pan_troglodytes
ENSXMAG00000009402	gars	93	84.594	ENSPANG00000026231	GARS	99	82.377	Papio_anubis
ENSXMAG00000009402	gars	98	84.861	ENSPKIG00000014863	gars	97	84.861	Paramormyrops_kingsleyae
ENSXMAG00000009402	gars	87	88.138	ENSPSIG00000010935	GARS	99	88.799	Pelodiscus_sinensis
ENSXMAG00000009402	gars	98	83.858	ENSPMGG00000023644	gars	100	83.858	Periophthalmus_magnuspinnatus
ENSXMAG00000009402	gars	51	80.457	ENSPMGG00000023648	gars	99	80.457	Periophthalmus_magnuspinnatus
ENSXMAG00000009402	gars	87	88.271	ENSPEMG00000019930	Gars	100	88.271	Peromyscus_maniculatus_bairdii
ENSXMAG00000009402	gars	90	75.325	ENSPMAG00000006586	gars	99	75.325	Petromyzon_marinus
ENSXMAG00000009402	gars	90	81.831	ENSPCIG00000017010	GARS	98	76.781	Phascolarctos_cinereus
ENSXMAG00000009402	gars	98	98.269	ENSPFOG00000004593	gars	100	98.269	Poecilia_formosa
ENSXMAG00000009402	gars	98	97.870	ENSPLAG00000008038	gars	100	97.870	Poecilia_latipinna
ENSXMAG00000009402	gars	98	98.136	ENSPMEG00000005901	gars	100	98.136	Poecilia_mexicana
ENSXMAG00000009402	gars	98	98.260	ENSPREG00000020960	gars	97	98.260	Poecilia_reticulata
ENSXMAG00000009402	gars	93	83.731	ENSPPYG00000017673	GARS	100	81.477	Pongo_abelii
ENSXMAG00000009402	gars	98	79.706	ENSPCAG00000007199	GARS	99	79.867	Procavia_capensis
ENSXMAG00000009402	gars	90	83.673	ENSPCOG00000008887	GARS	99	78.989	Propithecus_coquereli
ENSXMAG00000009402	gars	98	82.109	ENSPVAG00000013565	GARS	99	82.109	Pteropus_vampyrus
ENSXMAG00000009402	gars	88	83.333	ENSPNYG00000004960	gars	99	83.333	Pundamilia_nyererei
ENSXMAG00000009402	gars	98	89.867	ENSPNYG00000005017	gars	100	89.867	Pundamilia_nyererei
ENSXMAG00000009402	gars	98	83.841	ENSPNAG00000020164	gars	100	83.974	Pygocentrus_nattereri
ENSXMAG00000009402	gars	89	87.482	ENSRNOG00000011052	Gars	93	87.482	Rattus_norvegicus
ENSXMAG00000009402	gars	93	81.653	ENSRBIG00000040287	GARS	99	79.573	Rhinopithecus_bieti
ENSXMAG00000009402	gars	93	84.034	ENSRROG00000044600	GARS	99	81.842	Rhinopithecus_roxellana
ENSXMAG00000009402	gars	81	47.320	YBR121C	GRS1	98	47.626	Saccharomyces_cerevisiae
ENSXMAG00000009402	gars	76	50.000	YPR081C	-	94	50.000	Saccharomyces_cerevisiae
ENSXMAG00000009402	gars	93	83.894	ENSSBOG00000022287	GARS	99	81.575	Saimiri_boliviensis_boliviensis
ENSXMAG00000009402	gars	89	78.739	ENSSHAG00000003419	GARS	99	78.739	Sarcophilus_harrisii
ENSXMAG00000009402	gars	96	86.856	ENSSFOG00015000573	gars	99	85.059	Scleropages_formosus
ENSXMAG00000009402	gars	88	84.570	ENSSMAG00000013709	gars	99	84.570	Scophthalmus_maximus
ENSXMAG00000009402	gars	98	91.223	ENSSMAG00000013672	gars	100	91.223	Scophthalmus_maximus
ENSXMAG00000009402	gars	98	92.400	ENSSDUG00000016795	gars	100	92.400	Seriola_dumerili
ENSXMAG00000009402	gars	88	74.631	ENSSDUG00000016758	gars	100	74.631	Seriola_dumerili
ENSXMAG00000009402	gars	98	92.267	ENSSLDG00000014279	gars	100	92.267	Seriola_lalandi_dorsalis
ENSXMAG00000009402	gars	88	85.333	ENSSLDG00000014238	gars	99	85.333	Seriola_lalandi_dorsalis
ENSXMAG00000009402	gars	67	77.323	ENSSARG00000008410	GARS	82	77.323	Sorex_araneus
ENSXMAG00000009402	gars	89	86.842	ENSSPUG00000001815	-	99	81.794	Sphenodon_punctatus
ENSXMAG00000009402	gars	99	86.243	ENSSPAG00000012003	gars	99	86.243	Stegastes_partitus
ENSXMAG00000009402	gars	89	87.776	ENSSSCG00000016677	GARS	99	81.758	Sus_scrofa
ENSXMAG00000009402	gars	87	84.030	ENSTGUG00000000364	GARS	100	84.030	Taeniopygia_guttata
ENSXMAG00000009402	gars	98	86.667	ENSTRUG00000017557	gars	100	86.667	Takifugu_rubripes
ENSXMAG00000009402	gars	93	88.608	ENSTNIG00000012738	gars	99	88.608	Tetraodon_nigroviridis
ENSXMAG00000009402	gars	93	74.859	ENSTBEG00000008972	GARS	92	74.859	Tupaia_belangeri
ENSXMAG00000009402	gars	87	86.898	ENSTTRG00000000334	GARS	99	86.898	Tursiops_truncatus
ENSXMAG00000009402	gars	90	87.591	ENSUAMG00000016756	GARS	99	82.400	Ursus_americanus
ENSXMAG00000009402	gars	87	87.688	ENSUMAG00000002158	GARS	100	89.123	Ursus_maritimus
ENSXMAG00000009402	gars	90	80.029	ENSVPAG00000009438	GARS	99	75.538	Vicugna_pacos
ENSXMAG00000009402	gars	89	86.618	ENSVVUG00000020981	GARS	87	86.490	Vulpes_vulpes
ENSXMAG00000009402	gars	99	79.396	ENSXETG00000018474	gars	99	78.756	Xenopus_tropicalis
ENSXMAG00000009402	gars	98	98.278	ENSXCOG00000010005	gars	100	98.278	Xiphophorus_couchianus