EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009600 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9975 bases
Position: chr22:11300807-11310781
Accession: 102229950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009619	SpoU_methylase	PF00588.19	9.3e-13	1	1
ENSXMAP00000033073	SpoU_methylase	PF00588.19	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000025294	-	4878	-	ENSXMAP00000033073	1080 (aa)	-	-
ENSXMAT00000009633	-	3795	XM_014471952	ENSXMAP00000009619	1048 (aa)	XP_014327438	M4A575

Gene Model

Click here to download ENSXMAG00000009600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009600	si:dkey-85a20.4	100	43.123	ENSG00000059588	TARBP1	65	43.494	Homo_sapiens
ENSXMAG00000009600	si:dkey-85a20.4	100	77.165	ENSAPOG00000016419	si:dkey-85a20.4	65	77.069	Acanthochromis_polyacanthus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.115	ENSAMEG00000003359	TARBP1	77	42.354	Ailuropoda_melanoleuca
ENSXMAG00000009600	si:dkey-85a20.4	100	71.170	ENSATEG00000020266	si:dkey-85a20.4	64	71.170	Anabas_testudineus
ENSXMAG00000009600	si:dkey-85a20.4	100	45.362	ENSAPLG00000007666	TARBP1	80	45.362	Anas_platyrhynchos
ENSXMAG00000009600	si:dkey-85a20.4	100	43.233	ENSACAG00000001142	TARBP1	66	43.139	Anolis_carolinensis
ENSXMAG00000009600	si:dkey-85a20.4	100	43.785	ENSANAG00000022031	TARBP1	67	43.970	Aotus_nancymaae
ENSXMAG00000009600	si:dkey-85a20.4	92	62.264	ENSBTAG00000004517	TARBP1	62	62.264	Bos_taurus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.216	ENSCJAG00000018155	TARBP1	65	43.401	Callithrix_jacchus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.386	ENSCAFG00000011533	TARBP1	74	43.373	Canis_familiaris
ENSXMAG00000009600	si:dkey-85a20.4	100	43.454	ENSCAFG00020027141	TARBP1	65	43.454	Canis_lupus_dingo
ENSXMAG00000009600	si:dkey-85a20.4	100	42.804	ENSCHIG00000011437	TARBP1	64	43.137	Capra_hircus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.193	ENSTSYG00000010382	TARBP1	77	42.379	Carlito_syrichta
ENSXMAG00000009600	si:dkey-85a20.4	100	39.626	ENSCAPG00000010831	TARBP1	81	39.360	Cavia_aperea
ENSXMAG00000009600	si:dkey-85a20.4	100	42.096	ENSCPOG00000013995	TARBP1	66	42.198	Cavia_porcellus
ENSXMAG00000009600	si:dkey-85a20.4	94	52.518	ENSCCAG00000037278	TARBP1	63	52.518	Cebus_capucinus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.123	ENSCATG00000011754	TARBP1	65	43.216	Cercocebus_atys
ENSXMAG00000009600	si:dkey-85a20.4	100	41.876	ENSCLAG00000003655	TARBP1	77	41.983	Chinchilla_lanigera
ENSXMAG00000009600	si:dkey-85a20.4	100	43.309	ENSCSAG00000010100	TARBP1	81	43.401	Chlorocebus_sabaeus
ENSXMAG00000009600	si:dkey-85a20.4	87	64.407	ENSCPBG00000005587	TARBP1	64	65.957	Chrysemys_picta_bellii
ENSXMAG00000009600	si:dkey-85a20.4	100	43.309	ENSCANG00000034343	TARBP1	77	43.401	Colobus_angolensis_palliatus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.924	ENSCGRG00001016690	Tarbp1	66	42.535	Cricetulus_griseus_chok1gshd
ENSXMAG00000009600	si:dkey-85a20.4	100	42.924	ENSCGRG00000016893	Tarbp1	71	42.535	Cricetulus_griseus_crigri
ENSXMAG00000009600	si:dkey-85a20.4	100	60.667	ENSCSEG00000005255	si:dkey-85a20.4	63	64.407	Cynoglossus_semilaevis
ENSXMAG00000009600	si:dkey-85a20.4	100	56.357	ENSDARG00000079055	si:dkey-85a20.4	91	67.167	Danio_rerio
ENSXMAG00000009600	si:dkey-85a20.4	100	42.831	ENSDNOG00000008637	TARBP1	64	42.739	Dasypus_novemcinctus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.284	ENSDORG00000007984	Tarbp1	81	43.284	Dipodomys_ordii
ENSXMAG00000009600	si:dkey-85a20.4	100	43.616	ENSEASG00005000252	TARBP1	65	43.616	Equus_asinus_asinus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.715	ENSECAG00000023673	TARBP1	60	51.282	Equus_caballus
ENSXMAG00000009600	si:dkey-85a20.4	100	59.287	ENSELUG00000012193	si:dkey-85a20.4	66	59.006	Esox_lucius
ENSXMAG00000009600	si:dkey-85a20.4	100	41.921	ENSFCAG00000014183	TARBP1	64	41.921	Felis_catus
ENSXMAG00000009600	si:dkey-85a20.4	100	44.268	ENSFALG00000013565	TARBP1	80	43.941	Ficedula_albicollis
ENSXMAG00000009600	si:dkey-85a20.4	100	40.909	ENSFDAG00000001308	TARBP1	81	41.182	Fukomys_damarensis
ENSXMAG00000009600	si:dkey-85a20.4	100	64.252	ENSFHEG00000007565	si:dkey-85a20.4	62	76.807	Fundulus_heteroclitus
ENSXMAG00000009600	si:dkey-85a20.4	100	59.065	ENSGMOG00000004549	si:dkey-85a20.4	76	59.065	Gadus_morhua
ENSXMAG00000009600	si:dkey-85a20.4	91	59.649	ENSGALG00000011000	TARBP1	64	59.649	Gallus_gallus
ENSXMAG00000009600	si:dkey-85a20.4	100	96.374	ENSGAFG00000007387	si:dkey-85a20.4	64	96.374	Gambusia_affinis
ENSXMAG00000009600	si:dkey-85a20.4	100	69.720	ENSGACG00000005865	si:dkey-85a20.4	75	69.533	Gasterosteus_aculeatus
ENSXMAG00000009600	si:dkey-85a20.4	94	65.957	ENSGAGG00000012102	TARBP1	65	65.957	Gopherus_agassizii
ENSXMAG00000009600	si:dkey-85a20.4	100	41.767	ENSGGOG00000022879	TARBP1	76	41.953	Gorilla_gorilla
ENSXMAG00000009600	si:dkey-85a20.4	100	74.571	ENSHBUG00000008877	si:dkey-85a20.4	64	74.571	Haplochromis_burtoni
ENSXMAG00000009600	si:dkey-85a20.4	100	41.935	ENSHGLG00000011592	TARBP1	66	42.130	Heterocephalus_glaber_female
ENSXMAG00000009600	si:dkey-85a20.4	100	42.247	ENSHGLG00100015169	TARBP1	72	42.154	Heterocephalus_glaber_male
ENSXMAG00000009600	si:dkey-85a20.4	100	54.021	ENSIPUG00000005249	si:dkey-85a20.4	64	54.115	Ictalurus_punctatus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.591	ENSSTOG00000032291	TARBP1	75	42.365	Ictidomys_tridecemlineatus
ENSXMAG00000009600	si:dkey-85a20.4	97	40.667	ENSJJAG00000017840	Tarbp1	71	40.460	Jaculus_jaculus
ENSXMAG00000009600	si:dkey-85a20.4	84	72.222	ENSKMAG00000017546	si:dkey-85a20.4	59	69.509	Kryptolebias_marmoratus
ENSXMAG00000009600	si:dkey-85a20.4	79	92.308	ENSLBEG00000012132	si:dkey-85a20.4	58	70.959	Labrus_bergylta
ENSXMAG00000009600	si:dkey-85a20.4	100	46.089	ENSLACG00000004337	TARBP1	65	45.810	Latimeria_chalumnae
ENSXMAG00000009600	si:dkey-85a20.4	100	54.710	ENSLOCG00000016214	si:dkey-85a20.4	65	54.597	Lepisosteus_oculatus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.414	ENSLAFG00000011394	TARBP1	67	43.652	Loxodonta_africana
ENSXMAG00000009600	si:dkey-85a20.4	100	43.216	ENSMFAG00000041068	TARBP1	66	43.309	Macaca_fascicularis
ENSXMAG00000009600	si:dkey-85a20.4	100	42.924	ENSMMUG00000021703	TARBP1	65	43.018	Macaca_mulatta
ENSXMAG00000009600	si:dkey-85a20.4	100	43.216	ENSMNEG00000045002	TARBP1	65	43.309	Macaca_nemestrina
ENSXMAG00000009600	si:dkey-85a20.4	100	43.123	ENSMLEG00000044182	TARBP1	77	43.216	Mandrillus_leucophaeus
ENSXMAG00000009600	si:dkey-85a20.4	100	70.162	ENSMAMG00000021760	si:dkey-85a20.4	65	70.067	Mastacembelus_armatus
ENSXMAG00000009600	si:dkey-85a20.4	100	74.381	ENSMZEG00005005751	si:dkey-85a20.4	64	74.381	Maylandia_zebra
ENSXMAG00000009600	si:dkey-85a20.4	100	42.817	ENSMAUG00000020968	Tarbp1	66	42.670	Mesocricetus_auratus
ENSXMAG00000009600	si:dkey-85a20.4	100	39.758	ENSMICG00000015280	TARBP1	63	39.758	Microcebus_murinus
ENSXMAG00000009600	si:dkey-85a20.4	100	41.893	ENSMOCG00000004128	Tarbp1	66	41.963	Microtus_ochrogaster
ENSXMAG00000009600	si:dkey-85a20.4	100	69.077	ENSMMOG00000007795	si:dkey-85a20.4	66	68.411	Mola_mola
ENSXMAG00000009600	si:dkey-85a20.4	100	42.951	ENSMODG00000008504	TARBP1	63	42.951	Monodelphis_domestica
ENSXMAG00000009600	si:dkey-85a20.4	100	69.011	ENSMALG00000002916	si:dkey-85a20.4	65	69.011	Monopterus_albus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.254	MGP_CAROLIEiJ_G0031729	Tarbp1	64	52.607	Mus_caroli
ENSXMAG00000009600	si:dkey-85a20.4	100	42.791	ENSMUSG00000090290	Tarbp1	66	42.591	Mus_musculus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.112	MGP_PahariEiJ_G0023326	Tarbp1	66	43.018	Mus_pahari
ENSXMAG00000009600	si:dkey-85a20.4	100	42.441	MGP_SPRETEiJ_G0032846	Tarbp1	66	42.347	Mus_spretus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.031	ENSMPUG00000002802	TARBP1	84	43.031	Mustela_putorius_furo
ENSXMAG00000009600	si:dkey-85a20.4	100	41.389	ENSMLUG00000002414	TARBP1	77	41.574	Myotis_lucifugus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.030	ENSNLEG00000002518	TARBP1	65	43.299	Nomascus_leucogenys
ENSXMAG00000009600	si:dkey-85a20.4	100	42.326	ENSODEG00000005238	TARBP1	68	42.326	Octodon_degus
ENSXMAG00000009600	si:dkey-85a20.4	100	74.740	ENSONIG00000009789	si:dkey-85a20.4	75	74.740	Oreochromis_niloticus
ENSXMAG00000009600	si:dkey-85a20.4	100	41.914	ENSOCUG00000017418	TARBP1	64	41.914	Oryctolagus_cuniculus
ENSXMAG00000009600	si:dkey-85a20.4	100	69.685	ENSORLG00000010529	si:dkey-85a20.4	64	69.781	Oryzias_latipes
ENSXMAG00000009600	si:dkey-85a20.4	100	69.018	ENSORLG00020019264	si:dkey-85a20.4	64	69.113	Oryzias_latipes_hni
ENSXMAG00000009600	si:dkey-85a20.4	100	69.209	ENSORLG00015003276	si:dkey-85a20.4	64	69.304	Oryzias_latipes_hsok
ENSXMAG00000009600	si:dkey-85a20.4	100	41.073	ENSOGAG00000002379	TARBP1	65	41.014	Otolemur_garnettii
ENSXMAG00000009600	si:dkey-85a20.4	100	42.817	ENSOARG00000003434	TARBP1	69	43.150	Ovis_aries
ENSXMAG00000009600	si:dkey-85a20.4	100	43.309	ENSPPAG00000028097	TARBP1	77	43.486	Pan_paniscus
ENSXMAG00000009600	si:dkey-85a20.4	94	47.692	ENSPPRG00000013561	TARBP1	65	47.692	Panthera_pardus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.711	ENSPTIG00000009281	TARBP1	78	42.711	Panthera_tigris_altaica
ENSXMAG00000009600	si:dkey-85a20.4	100	43.205	ENSPTRG00000002124	TARBP1	65	43.580	Pan_troglodytes
ENSXMAG00000009600	si:dkey-85a20.4	100	42.924	ENSPANG00000021933	TARBP1	65	43.018	Papio_anubis
ENSXMAG00000009600	si:dkey-85a20.4	100	57.413	ENSPKIG00000016716	si:dkey-85a20.4	64	57.224	Paramormyrops_kingsleyae
ENSXMAG00000009600	si:dkey-85a20.4	100	44.486	ENSPSIG00000010699	TARBP1	82	44.579	Pelodiscus_sinensis
ENSXMAG00000009600	si:dkey-85a20.4	100	42.697	ENSPEMG00000006888	Tarbp1	70	42.549	Peromyscus_maniculatus_bairdii
ENSXMAG00000009600	si:dkey-85a20.4	86	63.758	ENSPCIG00000029710	TARBP1	60	63.758	Phascolarctos_cinereus
ENSXMAG00000009600	si:dkey-85a20.4	100	93.251	ENSPFOG00000013020	si:dkey-85a20.4	75	93.251	Poecilia_formosa
ENSXMAG00000009600	si:dkey-85a20.4	100	94.656	ENSPLAG00000006044	si:dkey-85a20.4	64	94.656	Poecilia_latipinna
ENSXMAG00000009600	si:dkey-85a20.4	100	94.561	ENSPMEG00000017857	si:dkey-85a20.4	64	94.561	Poecilia_mexicana
ENSXMAG00000009600	si:dkey-85a20.4	100	94.370	ENSPREG00000022753	si:dkey-85a20.4	64	94.370	Poecilia_reticulata
ENSXMAG00000009600	si:dkey-85a20.4	100	43.123	ENSPPYG00000000102	TARBP1	71	43.299	Pongo_abelii
ENSXMAG00000009600	si:dkey-85a20.4	100	41.767	ENSPCOG00000005666	TARBP1	64	41.674	Propithecus_coquereli
ENSXMAG00000009600	si:dkey-85a20.4	94	54.622	ENSPVAG00000014798	TARBP1	65	38.626	Pteropus_vampyrus
ENSXMAG00000009600	si:dkey-85a20.4	100	69.495	ENSPNYG00000019135	si:dkey-85a20.4	63	69.495	Pundamilia_nyererei
ENSXMAG00000009600	si:dkey-85a20.4	100	40.613	ENSRNOG00000053574	Tarbp1	66	40.613	Rattus_norvegicus
ENSXMAG00000009600	si:dkey-85a20.4	100	41.899	ENSRBIG00000043362	TARBP1	73	41.774	Rhinopithecus_bieti
ENSXMAG00000009600	si:dkey-85a20.4	100	43.216	ENSRROG00000029527	TARBP1	67	43.309	Rhinopithecus_roxellana
ENSXMAG00000009600	si:dkey-85a20.4	100	43.218	ENSSBOG00000034503	TARBP1	75	43.592	Saimiri_boliviensis_boliviensis
ENSXMAG00000009600	si:dkey-85a20.4	100	43.043	ENSSHAG00000000013	TARBP1	78	43.043	Sarcophilus_harrisii
ENSXMAG00000009600	si:dkey-85a20.4	100	56.338	ENSSFOG00015002660	si:dkey-85a20.4	78	56.338	Scleropages_formosus
ENSXMAG00000009600	si:dkey-85a20.4	100	71.483	ENSSMAG00000007081	si:dkey-85a20.4	63	71.388	Scophthalmus_maximus
ENSXMAG00000009600	si:dkey-85a20.4	100	69.495	ENSSDUG00000023566	si:dkey-85a20.4	64	69.781	Seriola_dumerili
ENSXMAG00000009600	si:dkey-85a20.4	100	73.739	ENSSLDG00000020200	si:dkey-85a20.4	65	73.930	Seriola_lalandi_dorsalis
ENSXMAG00000009600	si:dkey-85a20.4	93	54.805	ENSSARG00000012207	TARBP1	60	54.805	Sorex_araneus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.017	ENSSPUG00000015364	TARBP1	64	42.017	Sphenodon_punctatus
ENSXMAG00000009600	si:dkey-85a20.4	100	77.450	ENSSPAG00000007213	si:dkey-85a20.4	65	77.355	Stegastes_partitus
ENSXMAG00000009600	si:dkey-85a20.4	100	43.271	ENSSSCG00000010160	TARBP1	68	43.417	Sus_scrofa
ENSXMAG00000009600	si:dkey-85a20.4	100	44.022	ENSTGUG00000010214	TARBP1	81	44.022	Taeniopygia_guttata
ENSXMAG00000009600	si:dkey-85a20.4	100	66.857	ENSTNIG00000016586	si:dkey-85a20.4	77	66.762	Tetraodon_nigroviridis
ENSXMAG00000009600	si:dkey-85a20.4	98	42.165	ENSTTRG00000008707	TARBP1	66	42.505	Tursiops_truncatus
ENSXMAG00000009600	si:dkey-85a20.4	100	42.115	ENSUMAG00000006730	TARBP1	79	41.280	Ursus_maritimus
ENSXMAG00000009600	si:dkey-85a20.4	77	60.870	ENSVPAG00000007665	TARBP1	57	60.870	Vicugna_pacos
ENSXMAG00000009600	si:dkey-85a20.4	100	43.535	ENSVVUG00000007460	TARBP1	74	43.268	Vulpes_vulpes
ENSXMAG00000009600	si:dkey-85a20.4	99	42.017	ENSXETG00000016224	tarbp1	76	41.908	Xenopus_tropicalis
ENSXMAG00000009600	si:dkey-85a20.4	96	90.231	ENSXCOG00000011779	si:dkey-85a20.4	72	98.214	Xiphophorus_couchianus