EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009691 (Gene tree)
Gene ID: 102222975
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11295 bases
Position: chr10:22299931-22311225
Accession: 102222975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000009732	SAP	PF02037.27	1.6e-10	1	1
ENSXMAP00000033130	SAP	PF02037.27	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000009746	-	1918	XM_023340332	ENSXMAP00000009732	610 (aa)	XP_023196100	M4A5I8
ENSXMAT00000035334	-	7152	XM_023340331	ENSXMAP00000033130	610 (aa)	XP_023196099	UPI000C6EED9A

Gene Model

Click here to download ENSXMAG00000009691's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009691	xrcc6	99	55.392	ENSG00000196419	XRCC6	99	55.556	Homo_sapiens
ENSXMAG00000009691	xrcc6	99	85.057	ENSAPOG00000012704	xrcc6	100	85.057	Acanthochromis_polyacanthus
ENSXMAG00000009691	xrcc6	100	85.082	ENSACIG00000021277	xrcc6	100	85.082	Amphilophus_citrinellus
ENSXMAG00000009691	xrcc6	100	84.918	ENSAOCG00000021344	xrcc6	100	84.918	Amphiprion_ocellaris
ENSXMAG00000009691	xrcc6	100	85.082	ENSAPEG00000020712	xrcc6	100	85.082	Amphiprion_percula
ENSXMAG00000009691	xrcc6	100	84.426	ENSATEG00000007119	xrcc6	100	84.426	Anabas_testudineus
ENSXMAG00000009691	xrcc6	90	60.512	ENSAPLG00000004469	XRCC6	98	60.512	Anas_platyrhynchos
ENSXMAG00000009691	xrcc6	99	48.693	ENSANAG00000035230	-	99	48.529	Aotus_nancymaae
ENSXMAG00000009691	xrcc6	99	46.538	ENSANAG00000023445	-	99	46.538	Aotus_nancymaae
ENSXMAG00000009691	xrcc6	99	55.229	ENSANAG00000018684	XRCC6	99	55.229	Aotus_nancymaae
ENSXMAG00000009691	xrcc6	99	48.768	ENSANAG00000020017	-	99	48.768	Aotus_nancymaae
ENSXMAG00000009691	xrcc6	100	85.738	ENSACLG00000018608	xrcc6	100	85.738	Astatotilapia_calliptera
ENSXMAG00000009691	xrcc6	99	77.467	ENSAMXG00000007545	xrcc6	100	77.340	Astyanax_mexicanus
ENSXMAG00000009691	xrcc6	99	55.229	ENSCJAG00000045512	XRCC6	99	55.229	Callithrix_jacchus
ENSXMAG00000009691	xrcc6	99	55.719	ENSTSYG00000011348	XRCC6	99	55.719	Carlito_syrichta
ENSXMAG00000009691	xrcc6	99	53.571	ENSCCAG00000030468	-	99	53.571	Cebus_capucinus
ENSXMAG00000009691	xrcc6	99	44.975	ENSCCAG00000035711	-	99	44.811	Cebus_capucinus
ENSXMAG00000009691	xrcc6	99	52.124	ENSCCAG00000030041	-	95	51.634	Cebus_capucinus
ENSXMAG00000009691	xrcc6	99	46.470	ENSCCAG00000037663	-	97	46.470	Cebus_capucinus
ENSXMAG00000009691	xrcc6	99	55.556	ENSCATG00000042366	XRCC6	99	55.719	Cercocebus_atys
ENSXMAG00000009691	xrcc6	99	56.137	ENSCLAG00000016669	XRCC6	99	56.137	Chinchilla_lanigera
ENSXMAG00000009691	xrcc6	99	55.556	ENSCSAG00000005784	XRCC6	99	55.719	Chlorocebus_sabaeus
ENSXMAG00000009691	xrcc6	99	59.113	ENSCPBG00000020535	XRCC6	99	59.113	Chrysemys_picta_bellii
ENSXMAG00000009691	xrcc6	99	33.333	ENSCING00000000633	-	95	33.793	Ciona_intestinalis
ENSXMAG00000009691	xrcc6	99	55.556	ENSCANG00000031032	XRCC6	99	55.719	Colobus_angolensis_palliatus
ENSXMAG00000009691	xrcc6	99	52.224	ENSCGRG00001019029	Xrcc6	99	52.224	Cricetulus_griseus_chok1gshd
ENSXMAG00000009691	xrcc6	99	56.721	ENSCGRG00000001528	Xrcc6	99	57.002	Cricetulus_griseus_crigri
ENSXMAG00000009691	xrcc6	100	79.180	ENSCSEG00000020434	xrcc6	100	79.180	Cynoglossus_semilaevis
ENSXMAG00000009691	xrcc6	100	88.689	ENSCVAG00000002189	xrcc6	100	88.689	Cyprinodon_variegatus
ENSXMAG00000009691	xrcc6	99	74.056	ENSDARG00000071551	xrcc6	99	74.713	Danio_rerio
ENSXMAG00000009691	xrcc6	78	52.798	ENSETEG00000015333	-	77	52.798	Echinops_telfairi
ENSXMAG00000009691	xrcc6	99	54.992	ENSEASG00005001514	XRCC6	99	55.646	Equus_asinus_asinus
ENSXMAG00000009691	xrcc6	99	55.155	ENSECAG00000017563	XRCC6	99	55.398	Equus_caballus
ENSXMAG00000009691	xrcc6	100	74.754	ENSELUG00000020301	xrcc6	100	74.754	Esox_lucius
ENSXMAG00000009691	xrcc6	99	58.891	ENSFALG00000011908	XRCC6	96	59.054	Ficedula_albicollis
ENSXMAG00000009691	xrcc6	100	91.639	ENSFHEG00000016833	xrcc6	100	91.639	Fundulus_heteroclitus
ENSXMAG00000009691	xrcc6	99	68.567	ENSGMOG00000013524	xrcc6	100	68.567	Gadus_morhua
ENSXMAG00000009691	xrcc6	99	57.980	ENSGALG00000011932	XRCC6	99	58.143	Gallus_gallus
ENSXMAG00000009691	xrcc6	100	94.262	ENSGAFG00000008130	xrcc6	100	94.262	Gambusia_affinis
ENSXMAG00000009691	xrcc6	99	82.248	ENSGACG00000004868	xrcc6	99	82.248	Gasterosteus_aculeatus
ENSXMAG00000009691	xrcc6	99	58.949	ENSGAGG00000017518	XRCC6	99	58.949	Gopherus_agassizii
ENSXMAG00000009691	xrcc6	99	55.392	ENSGGOG00000015885	XRCC6	96	58.772	Gorilla_gorilla
ENSXMAG00000009691	xrcc6	93	85.866	ENSHBUG00000023281	xrcc6	100	85.866	Haplochromis_burtoni
ENSXMAG00000009691	xrcc6	99	55.902	ENSHGLG00000018078	XRCC6	99	55.574	Heterocephalus_glaber_female
ENSXMAG00000009691	xrcc6	99	55.902	ENSHGLG00100011264	XRCC6	99	55.574	Heterocephalus_glaber_male
ENSXMAG00000009691	xrcc6	100	77.869	ENSHCOG00000009821	xrcc6	100	77.869	Hippocampus_comes
ENSXMAG00000009691	xrcc6	99	76.190	ENSIPUG00000000767	xrcc6	99	75.369	Ictalurus_punctatus
ENSXMAG00000009691	xrcc6	99	54.992	ENSSTOG00000009490	XRCC6	99	55.319	Ictidomys_tridecemlineatus
ENSXMAG00000009691	xrcc6	99	52.131	ENSJJAG00000017136	Xrcc6	99	52.874	Jaculus_jaculus
ENSXMAG00000009691	xrcc6	99	88.177	ENSKMAG00000002141	xrcc6	99	88.177	Kryptolebias_marmoratus
ENSXMAG00000009691	xrcc6	99	85.033	ENSLBEG00000002691	xrcc6	99	85.033	Labrus_bergylta
ENSXMAG00000009691	xrcc6	87	64.356	ENSLOCG00000011533	xrcc6	99	64.356	Lepisosteus_oculatus
ENSXMAG00000009691	xrcc6	99	55.556	ENSMFAG00000003352	XRCC6	99	55.719	Macaca_fascicularis
ENSXMAG00000009691	xrcc6	99	55.556	ENSMMUG00000001856	XRCC6	99	55.719	Macaca_mulatta
ENSXMAG00000009691	xrcc6	99	55.556	ENSMNEG00000035076	XRCC6	99	55.719	Macaca_nemestrina
ENSXMAG00000009691	xrcc6	99	55.556	ENSMLEG00000019869	XRCC6	99	55.719	Mandrillus_leucophaeus
ENSXMAG00000009691	xrcc6	96	82.964	ENSMAMG00000003405	xrcc6	97	82.964	Mastacembelus_armatus
ENSXMAG00000009691	xrcc6	100	83.306	ENSMAMG00000003368	xrcc6	100	83.306	Mastacembelus_armatus
ENSXMAG00000009691	xrcc6	100	85.574	ENSMZEG00005028080	xrcc6	100	85.574	Maylandia_zebra
ENSXMAG00000009691	xrcc6	99	58.469	ENSMGAG00000012146	XRCC6	99	58.537	Meleagris_gallopavo
ENSXMAG00000009691	xrcc6	99	57.049	ENSMAUG00000017340	Xrcc6	99	57.331	Mesocricetus_auratus
ENSXMAG00000009691	xrcc6	99	56.178	ENSMOCG00000015717	Xrcc6	99	56.343	Microtus_ochrogaster
ENSXMAG00000009691	xrcc6	100	81.475	ENSMMOG00000003536	xrcc6	99	81.475	Mola_mola
ENSXMAG00000009691	xrcc6	100	84.262	ENSMALG00000013912	xrcc6	95	84.262	Monopterus_albus
ENSXMAG00000009691	xrcc6	99	53.279	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.279	Mus_caroli
ENSXMAG00000009691	xrcc6	99	57.705	ENSMUSG00000022471	Xrcc6	99	60.456	Mus_musculus
ENSXMAG00000009691	xrcc6	99	57.541	MGP_PahariEiJ_G0020069	Xrcc6	99	57.541	Mus_pahari
ENSXMAG00000009691	xrcc6	96	58.219	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.219	Mus_spretus
ENSXMAG00000009691	xrcc6	99	57.166	ENSNGAG00000013750	Xrcc6	99	57.166	Nannospalax_galili
ENSXMAG00000009691	xrcc6	100	85.738	ENSNBRG00000004125	xrcc6	100	85.738	Neolamprologus_brichardi
ENSXMAG00000009691	xrcc6	95	58.348	ENSOPRG00000002386	XRCC6	99	58.348	Ochotona_princeps
ENSXMAG00000009691	xrcc6	99	55.646	ENSODEG00000015847	XRCC6	99	55.646	Octodon_degus
ENSXMAG00000009691	xrcc6	100	85.246	ENSONIG00000019715	xrcc6	100	85.246	Oreochromis_niloticus
ENSXMAG00000009691	xrcc6	68	59.036	ENSOANG00000011328	XRCC6	99	59.036	Ornithorhynchus_anatinus
ENSXMAG00000009691	xrcc6	99	56.743	ENSOCUG00000006948	XRCC6	99	57.072	Oryctolagus_cuniculus
ENSXMAG00000009691	xrcc6	100	83.142	ENSORLG00020007820	xrcc6	100	83.142	Oryzias_latipes_hni
ENSXMAG00000009691	xrcc6	100	82.815	ENSORLG00015006406	xrcc6	100	82.815	Oryzias_latipes_hsok
ENSXMAG00000009691	xrcc6	100	82.815	ENSOMEG00000008998	xrcc6	100	82.815	Oryzias_melastigma
ENSXMAG00000009691	xrcc6	99	55.483	ENSOGAG00000008821	XRCC6	99	55.646	Otolemur_garnettii
ENSXMAG00000009691	xrcc6	92	55.676	ENSPPAG00000037167	XRCC6	99	55.676	Pan_paniscus
ENSXMAG00000009691	xrcc6	99	55.392	ENSPTRG00000045824	XRCC6	99	56.410	Pan_troglodytes
ENSXMAG00000009691	xrcc6	99	55.392	ENSPTRG00000022548	XRCC6	99	56.410	Pan_troglodytes
ENSXMAG00000009691	xrcc6	99	55.719	ENSPANG00000001252	XRCC6	99	58.621	Papio_anubis
ENSXMAG00000009691	xrcc6	99	71.546	ENSPKIG00000003974	xrcc6	99	71.546	Paramormyrops_kingsleyae
ENSXMAG00000009691	xrcc6	99	79.568	ENSPMGG00000014220	xrcc6	100	79.568	Periophthalmus_magnuspinnatus
ENSXMAG00000009691	xrcc6	99	56.343	ENSPEMG00000023446	Xrcc6	99	56.343	Peromyscus_maniculatus_bairdii
ENSXMAG00000009691	xrcc6	99	56.956	ENSPCIG00000026409	XRCC6	99	56.956	Phascolarctos_cinereus
ENSXMAG00000009691	xrcc6	100	96.230	ENSPFOG00000017173	xrcc6	100	96.230	Poecilia_formosa
ENSXMAG00000009691	xrcc6	100	95.902	ENSPLAG00000000562	xrcc6	100	95.902	Poecilia_latipinna
ENSXMAG00000009691	xrcc6	100	96.066	ENSPMEG00000018478	xrcc6	100	96.066	Poecilia_mexicana
ENSXMAG00000009691	xrcc6	100	95.588	ENSPREG00000020957	xrcc6	93	95.588	Poecilia_reticulata
ENSXMAG00000009691	xrcc6	99	49.346	ENSPPYG00000011876	XRCC6	99	49.510	Pongo_abelii
ENSXMAG00000009691	xrcc6	99	55.574	ENSPVAG00000001168	XRCC6	99	55.574	Pteropus_vampyrus
ENSXMAG00000009691	xrcc6	100	85.410	ENSPNYG00000003815	xrcc6	100	81.279	Pundamilia_nyererei
ENSXMAG00000009691	xrcc6	99	57.049	ENSRNOG00000006392	Xrcc6	99	57.213	Rattus_norvegicus
ENSXMAG00000009691	xrcc6	99	51.307	ENSRBIG00000039794	XRCC6	99	52.470	Rhinopithecus_bieti
ENSXMAG00000009691	xrcc6	99	55.556	ENSRROG00000030297	XRCC6	99	55.719	Rhinopithecus_roxellana
ENSXMAG00000009691	xrcc6	67	50.122	ENSSBOG00000024724	-	99	50.122	Saimiri_boliviensis_boliviensis
ENSXMAG00000009691	xrcc6	99	56.046	ENSSHAG00000010790	XRCC6	99	56.046	Sarcophilus_harrisii
ENSXMAG00000009691	xrcc6	99	73.849	ENSSFOG00015014409	xrcc6	99	73.849	Scleropages_formosus
ENSXMAG00000009691	xrcc6	100	85.246	ENSSMAG00000006496	xrcc6	100	85.246	Scophthalmus_maximus
ENSXMAG00000009691	xrcc6	100	85.410	ENSSDUG00000007542	xrcc6	100	85.410	Seriola_dumerili
ENSXMAG00000009691	xrcc6	100	84.754	ENSSLDG00000009974	xrcc6	100	84.754	Seriola_lalandi_dorsalis
ENSXMAG00000009691	xrcc6	99	58.333	ENSSPUG00000012086	XRCC6	99	58.497	Sphenodon_punctatus
ENSXMAG00000009691	xrcc6	100	86.557	ENSSPAG00000015199	xrcc6	100	86.557	Stegastes_partitus
ENSXMAG00000009691	xrcc6	95	60.103	ENSTGUG00000009852	-	95	60.103	Taeniopygia_guttata
ENSXMAG00000009691	xrcc6	99	77.833	ENSTRUG00000017070	xrcc6	99	78.489	Takifugu_rubripes
ENSXMAG00000009691	xrcc6	96	78.342	ENSTNIG00000012947	xrcc6	99	78.342	Tetraodon_nigroviridis
ENSXMAG00000009691	xrcc6	96	52.397	ENSTBEG00000011736	XRCC6	99	52.397	Tupaia_belangeri
ENSXMAG00000009691	xrcc6	99	46.481	ENSTTRG00000006749	XRCC6	99	47.300	Tursiops_truncatus