EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000009827 (Gene tree)
Gene ID: 102219857
Gene Symbol: wdr3
Alias: sb:cb42|wu:fb92b07
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 24557 bases
Position: chr7:5610446-5635002
Accession: 102219857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000027792	Utp12	PF04003.12	2.5e-19	1	1
ENSXMAP00000009888	Utp12	PF04003.12	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000009902	-	2757	-	ENSXMAP00000009888	918 (aa)	-	M4A5Z4
ENSXMAT00000031406	-	6542	XM_023337035	ENSXMAP00000027792	943 (aa)	XP_023192803	UPI0002939E01

Gene Model

Click here to download ENSXMAG00000009827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000009827	wdr3	99	69.239	ENSG00000065183	WDR3	99	69.068	Homo_sapiens
ENSXMAG00000009827	wdr3	100	84.624	ENSAPOG00000005975	wdr3	99	88.341	Acanthochromis_polyacanthus
ENSXMAG00000009827	wdr3	98	69.687	ENSAMEG00000004339	WDR3	98	69.364	Ailuropoda_melanoleuca
ENSXMAG00000009827	wdr3	100	79.745	ENSACIG00000006993	wdr3	100	78.897	Amphilophus_citrinellus
ENSXMAG00000009827	wdr3	100	86.532	ENSAOCG00000023966	wdr3	99	87.668	Amphiprion_ocellaris
ENSXMAG00000009827	wdr3	100	88.229	ENSAPEG00000018223	wdr3	100	88.123	Amphiprion_percula
ENSXMAG00000009827	wdr3	100	88.653	ENSATEG00000000703	wdr3	100	88.229	Anabas_testudineus
ENSXMAG00000009827	wdr3	98	64.871	ENSACAG00000008210	WDR3	98	64.687	Anolis_carolinensis
ENSXMAG00000009827	wdr3	100	69.483	ENSANAG00000033348	WDR3	99	69.386	Aotus_nancymaae
ENSXMAG00000009827	wdr3	100	89.502	ENSACLG00000016975	wdr3	100	89.396	Astatotilapia_calliptera
ENSXMAG00000009827	wdr3	99	80.382	ENSAMXG00000005755	wdr3	99	80.806	Astyanax_mexicanus
ENSXMAG00000009827	wdr3	99	69.027	ENSBTAG00000019937	WDR3	99	68.962	Bos_taurus
ENSXMAG00000009827	wdr3	100	35.521	WBGene00017435	F13H8.2	97	35.144	Caenorhabditis_elegans
ENSXMAG00000009827	wdr3	100	69.060	ENSCJAG00000005749	WDR3	99	68.856	Callithrix_jacchus
ENSXMAG00000009827	wdr3	98	68.784	ENSCAFG00000009916	WDR3	98	68.716	Canis_familiaris
ENSXMAG00000009827	wdr3	94	70.790	ENSCAFG00020020610	WDR3	93	70.790	Canis_lupus_dingo
ENSXMAG00000009827	wdr3	99	69.133	ENSCHIG00000010490	WDR3	99	68.962	Capra_hircus
ENSXMAG00000009827	wdr3	99	69.979	ENSTSYG00000002158	WDR3	99	69.767	Carlito_syrichta
ENSXMAG00000009827	wdr3	100	55.873	ENSCAPG00000015805	WDR3	100	55.246	Cavia_aperea
ENSXMAG00000009827	wdr3	99	68.922	ENSCPOG00000011305	WDR3	99	68.856	Cavia_porcellus
ENSXMAG00000009827	wdr3	100	69.450	ENSCCAG00000037237	WDR3	98	69.330	Cebus_capucinus
ENSXMAG00000009827	wdr3	99	69.133	ENSCATG00000037200	WDR3	99	68.962	Cercocebus_atys
ENSXMAG00000009827	wdr3	99	69.280	ENSCLAG00000010657	WDR3	99	69.068	Chinchilla_lanigera
ENSXMAG00000009827	wdr3	99	69.133	ENSCSAG00000001705	WDR3	99	68.962	Chlorocebus_sabaeus
ENSXMAG00000009827	wdr3	82	72.857	ENSCHOG00000006428	WDR3	83	72.857	Choloepus_hoffmanni
ENSXMAG00000009827	wdr3	98	69.122	ENSCPBG00000001426	WDR3	98	69.006	Chrysemys_picta_bellii
ENSXMAG00000009827	wdr3	99	68.571	ENSCGRG00001019544	Wdr3	99	68.187	Cricetulus_griseus_chok1gshd
ENSXMAG00000009827	wdr3	95	65.041	ENSCGRG00000001027	Wdr3	100	65.366	Cricetulus_griseus_crigri
ENSXMAG00000009827	wdr3	100	85.154	ENSCSEG00000009381	wdr3	100	85.260	Cynoglossus_semilaevis
ENSXMAG00000009827	wdr3	100	87.712	ENSCVAG00000014846	wdr3	100	87.500	Cyprinodon_variegatus
ENSXMAG00000009827	wdr3	99	80.276	ENSDARG00000011079	wdr3	99	80.806	Danio_rerio
ENSXMAG00000009827	wdr3	99	69.133	ENSDNOG00000018114	WDR3	99	69.068	Dasypus_novemcinctus
ENSXMAG00000009827	wdr3	99	68.908	ENSDORG00000011031	Wdr3	99	68.908	Dipodomys_ordii
ENSXMAG00000009827	wdr3	98	42.628	FBgn0038597	CG8064	98	42.333	Drosophila_melanogaster
ENSXMAG00000009827	wdr3	99	69.133	ENSEASG00005006393	WDR3	99	68.962	Equus_asinus_asinus
ENSXMAG00000009827	wdr3	99	69.133	ENSECAG00000006575	WDR3	99	68.962	Equus_caballus
ENSXMAG00000009827	wdr3	95	69.911	ENSEEUG00000002218	WDR3	100	69.619	Erinaceus_europaeus
ENSXMAG00000009827	wdr3	99	81.866	ENSELUG00000005997	wdr3	99	81.548	Esox_lucius
ENSXMAG00000009827	wdr3	98	69.429	ENSFCAG00000003469	WDR3	98	69.364	Felis_catus
ENSXMAG00000009827	wdr3	98	68.506	ENSFALG00000005089	WDR3	98	68.506	Ficedula_albicollis
ENSXMAG00000009827	wdr3	99	68.922	ENSFDAG00000016284	WDR3	99	68.856	Fukomys_damarensis
ENSXMAG00000009827	wdr3	100	92.895	ENSFHEG00000012138	wdr3	95	92.577	Fundulus_heteroclitus
ENSXMAG00000009827	wdr3	94	77.176	ENSGMOG00000002962	wdr3	100	77.176	Gadus_morhua
ENSXMAG00000009827	wdr3	98	69.664	ENSGALG00000014791	WDR3	98	69.438	Gallus_gallus
ENSXMAG00000009827	wdr3	100	98.091	ENSGAFG00000013102	wdr3	100	98.091	Gambusia_affinis
ENSXMAG00000009827	wdr3	95	77.372	ENSGACG00000008251	wdr3	100	75.532	Gasterosteus_aculeatus
ENSXMAG00000009827	wdr3	95	69.653	ENSGAGG00000009171	WDR3	96	69.765	Gopherus_agassizii
ENSXMAG00000009827	wdr3	99	69.345	ENSGGOG00000009982	WDR3	99	69.174	Gorilla_gorilla
ENSXMAG00000009827	wdr3	100	89.608	ENSHBUG00000004367	wdr3	100	89.502	Haplochromis_burtoni
ENSXMAG00000009827	wdr3	100	68.849	ENSHGLG00000017936	WDR3	99	68.750	Heterocephalus_glaber_female
ENSXMAG00000009827	wdr3	100	68.849	ENSHGLG00100008292	WDR3	99	68.750	Heterocephalus_glaber_male
ENSXMAG00000009827	wdr3	100	76.653	ENSHCOG00000017501	wdr3	98	82.927	Hippocampus_comes
ENSXMAG00000009827	wdr3	99	79.427	ENSIPUG00000003396	wdr3	99	79.745	Ictalurus_punctatus
ENSXMAG00000009827	wdr3	99	69.174	ENSSTOG00000003504	WDR3	99	69.068	Ictidomys_tridecemlineatus
ENSXMAG00000009827	wdr3	99	68.526	ENSJJAG00000013861	Wdr3	99	68.360	Jaculus_jaculus
ENSXMAG00000009827	wdr3	100	87.012	ENSKMAG00000016004	wdr3	99	88.939	Kryptolebias_marmoratus
ENSXMAG00000009827	wdr3	100	81.866	ENSLBEG00000013757	wdr3	100	82.185	Labrus_bergylta
ENSXMAG00000009827	wdr3	100	65.859	ENSLACG00000014259	WDR3	100	65.340	Latimeria_chalumnae
ENSXMAG00000009827	wdr3	100	74.047	ENSLOCG00000011052	wdr3	100	73.835	Lepisosteus_oculatus
ENSXMAG00000009827	wdr3	99	69.556	ENSLAFG00000012108	WDR3	99	69.280	Loxodonta_africana
ENSXMAG00000009827	wdr3	99	69.239	ENSMFAG00000034570	WDR3	99	68.962	Macaca_fascicularis
ENSXMAG00000009827	wdr3	99	69.133	ENSMMUG00000008513	WDR3	99	68.856	Macaca_mulatta
ENSXMAG00000009827	wdr3	99	69.239	ENSMNEG00000039555	WDR3	99	68.962	Macaca_nemestrina
ENSXMAG00000009827	wdr3	99	68.922	ENSMLEG00000035516	WDR3	99	68.856	Mandrillus_leucophaeus
ENSXMAG00000009827	wdr3	100	81.760	ENSMAMG00000020737	wdr3	100	81.866	Mastacembelus_armatus
ENSXMAG00000009827	wdr3	100	83.316	ENSMZEG00005019253	wdr3	100	82.981	Maylandia_zebra
ENSXMAG00000009827	wdr3	96	69.403	ENSMGAG00000014241	WDR3	97	65.611	Meleagris_gallopavo
ENSXMAG00000009827	wdr3	99	67.937	ENSMAUG00000002574	Wdr3	99	68.081	Mesocricetus_auratus
ENSXMAG00000009827	wdr3	100	69.506	ENSMICG00000001783	WDR3	100	69.386	Microcebus_murinus
ENSXMAG00000009827	wdr3	99	68.995	ENSMOCG00000014361	Wdr3	99	68.962	Microtus_ochrogaster
ENSXMAG00000009827	wdr3	100	80.628	ENSMMOG00000019419	wdr3	100	80.794	Mola_mola
ENSXMAG00000009827	wdr3	100	68.042	ENSMODG00000005243	WDR3	100	68.042	Monodelphis_domestica
ENSXMAG00000009827	wdr3	99	77.707	ENSMALG00000016265	wdr3	99	77.389	Monopterus_albus
ENSXMAG00000009827	wdr3	99	68.220	MGP_CAROLIEiJ_G0025421	Wdr3	99	68.220	Mus_caroli
ENSXMAG00000009827	wdr3	99	68.432	ENSMUSG00000033285	Wdr3	99	68.432	Mus_musculus
ENSXMAG00000009827	wdr3	99	68.220	MGP_PahariEiJ_G0026865	Wdr3	99	68.220	Mus_pahari
ENSXMAG00000009827	wdr3	99	68.008	MGP_SPRETEiJ_G0026371	Wdr3	99	68.008	Mus_spretus
ENSXMAG00000009827	wdr3	98	69.612	ENSMPUG00000001565	WDR3	98	69.654	Mustela_putorius_furo
ENSXMAG00000009827	wdr3	99	69.662	ENSMLUG00000003500	WDR3	99	69.492	Myotis_lucifugus
ENSXMAG00000009827	wdr3	99	68.493	ENSNGAG00000021117	Wdr3	99	68.611	Nannospalax_galili
ENSXMAG00000009827	wdr3	100	77.778	ENSNBRG00000015140	wdr3	100	77.542	Neolamprologus_brichardi
ENSXMAG00000009827	wdr3	99	68.922	ENSNLEG00000005304	WDR3	99	68.750	Nomascus_leucogenys
ENSXMAG00000009827	wdr3	92	84.483	ENSMEUG00000009673	WDR3	80	84.483	Notamacropus_eugenii
ENSXMAG00000009827	wdr3	99	63.214	ENSOPRG00000001857	WDR3	99	62.791	Ochotona_princeps
ENSXMAG00000009827	wdr3	93	69.099	ENSODEG00000000136	WDR3	100	69.143	Octodon_degus
ENSXMAG00000009827	wdr3	100	88.971	ENSONIG00000015678	wdr3	100	88.865	Oreochromis_niloticus
ENSXMAG00000009827	wdr3	98	68.438	ENSOANG00000003070	WDR3	98	68.216	Ornithorhynchus_anatinus
ENSXMAG00000009827	wdr3	99	69.662	ENSOCUG00000007572	WDR3	99	69.386	Oryctolagus_cuniculus
ENSXMAG00000009827	wdr3	100	86.744	ENSORLG00020022391	wdr3	100	86.532	Oryzias_latipes_hni
ENSXMAG00000009827	wdr3	100	86.532	ENSORLG00015023208	wdr3	100	86.426	Oryzias_latipes_hsok
ENSXMAG00000009827	wdr3	100	87.487	ENSOMEG00000017592	wdr3	100	87.063	Oryzias_melastigma
ENSXMAG00000009827	wdr3	99	69.662	ENSOGAG00000007399	WDR3	99	69.492	Otolemur_garnettii
ENSXMAG00000009827	wdr3	99	69.198	ENSOARG00000020325	WDR3	99	68.816	Ovis_aries
ENSXMAG00000009827	wdr3	99	69.345	ENSPPAG00000029068	WDR3	99	69.174	Pan_paniscus
ENSXMAG00000009827	wdr3	98	69.107	ENSPPRG00000022972	WDR3	98	69.040	Panthera_pardus
ENSXMAG00000009827	wdr3	99	69.101	ENSPTIG00000016747	WDR3	98	68.932	Panthera_tigris_altaica
ENSXMAG00000009827	wdr3	99	69.345	ENSPTRG00000001168	WDR3	99	69.174	Pan_troglodytes
ENSXMAG00000009827	wdr3	99	69.133	ENSPANG00000020680	WDR3	99	68.962	Papio_anubis
ENSXMAG00000009827	wdr3	100	78.178	ENSPKIG00000024900	wdr3	100	78.836	Paramormyrops_kingsleyae
ENSXMAG00000009827	wdr3	98	69.014	ENSPSIG00000017455	WDR3	99	68.717	Pelodiscus_sinensis
ENSXMAG00000009827	wdr3	98	81.996	ENSPMGG00000022686	wdr3	99	80.369	Periophthalmus_magnuspinnatus
ENSXMAG00000009827	wdr3	99	68.254	ENSPEMG00000011928	Wdr3	99	67.975	Peromyscus_maniculatus_bairdii
ENSXMAG00000009827	wdr3	95	68.568	ENSPCIG00000000938	WDR3	99	68.680	Phascolarctos_cinereus
ENSXMAG00000009827	wdr3	100	97.352	ENSPFOG00000017900	wdr3	100	97.352	Poecilia_formosa
ENSXMAG00000009827	wdr3	100	97.561	ENSPLAG00000014362	wdr3	100	97.561	Poecilia_latipinna
ENSXMAG00000009827	wdr3	99	69.312	ENSPPYG00000000970	WDR3	99	69.141	Pongo_abelii
ENSXMAG00000009827	wdr3	92	56.912	ENSPCAG00000001265	WDR3	99	56.697	Procavia_capensis
ENSXMAG00000009827	wdr3	100	83.051	ENSPNYG00000006217	wdr3	100	82.203	Pundamilia_nyererei
ENSXMAG00000009827	wdr3	99	80.488	ENSPNAG00000006843	wdr3	99	79.958	Pygocentrus_nattereri
ENSXMAG00000009827	wdr3	99	68.008	ENSRNOG00000019670	Wdr3	99	68.008	Rattus_norvegicus
ENSXMAG00000009827	wdr3	99	68.650	ENSRBIG00000039149	WDR3	98	68.103	Rhinopithecus_bieti
ENSXMAG00000009827	wdr3	99	69.133	ENSRROG00000028066	WDR3	99	69.351	Rhinopithecus_roxellana
ENSXMAG00000009827	wdr3	99	38.061	YLR129W	DIP2	98	37.681	Saccharomyces_cerevisiae
ENSXMAG00000009827	wdr3	100	69.588	ENSSBOG00000015569	WDR3	99	69.492	Saimiri_boliviensis_boliviensis
ENSXMAG00000009827	wdr3	98	67.918	ENSSHAG00000005169	WDR3	98	67.918	Sarcophilus_harrisii
ENSXMAG00000009827	wdr3	100	76.483	ENSSFOG00015000595	wdr3	100	76.931	Scleropages_formosus
ENSXMAG00000009827	wdr3	100	87.209	ENSSMAG00000008334	wdr3	100	87.315	Scophthalmus_maximus
ENSXMAG00000009827	wdr3	100	88.335	ENSSDUG00000014276	wdr3	100	88.123	Seriola_dumerili
ENSXMAG00000009827	wdr3	100	86.243	ENSSLDG00000012837	wdr3	100	85.714	Seriola_lalandi_dorsalis
ENSXMAG00000009827	wdr3	98	64.262	ENSSARG00000002347	WDR3	99	64.262	Sorex_araneus
ENSXMAG00000009827	wdr3	98	65.297	ENSSPUG00000005582	WDR3	98	65.405	Sphenodon_punctatus
ENSXMAG00000009827	wdr3	98	69.645	ENSSSCG00000006727	WDR3	98	69.471	Sus_scrofa
ENSXMAG00000009827	wdr3	98	68.290	ENSTGUG00000013357	WDR3	98	68.290	Taeniopygia_guttata
ENSXMAG00000009827	wdr3	100	83.139	ENSTRUG00000002727	wdr3	100	82.927	Takifugu_rubripes
ENSXMAG00000009827	wdr3	99	80.871	ENSTNIG00000005299	wdr3	98	81.553	Tetraodon_nigroviridis
ENSXMAG00000009827	wdr3	79	75.781	ENSTBEG00000002549	WDR3	74	75.781	Tupaia_belangeri
ENSXMAG00000009827	wdr3	99	62.262	ENSTTRG00000003817	WDR3	99	62.076	Tursiops_truncatus
ENSXMAG00000009827	wdr3	99	66.419	ENSUAMG00000023139	WDR3	98	65.804	Ursus_americanus
ENSXMAG00000009827	wdr3	90	69.883	ENSVPAG00000000073	WDR3	89	69.883	Vicugna_pacos
ENSXMAG00000009827	wdr3	98	68.999	ENSVVUG00000010629	WDR3	98	68.932	Vulpes_vulpes
ENSXMAG00000009827	wdr3	98	69.612	ENSXETG00000009920	wdr3	98	69.289	Xenopus_tropicalis