EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000009874 (Gene tree)
Gene ID
102238409
Gene Symbol
rbm47
Alias
si:ch211-241e15.2|wu:fj94a03
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
39313 bases
Position
chr5:13603954-13643266
Accession
102238409
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000034556RRM_5PF13893.64.3e-0611
ENSXMAP00000041037RRM_5PF13893.64.5e-0611
ENSXMAP00000034556RRM_1PF00076.221.6e-3813
ENSXMAP00000034556RRM_1PF00076.221.6e-3823
ENSXMAP00000034556RRM_1PF00076.221.6e-3833
ENSXMAP00000041037RRM_1PF00076.221.7e-3813
ENSXMAP00000041037RRM_1PF00076.221.7e-3823
ENSXMAP00000041037RRM_1PF00076.221.7e-3833
ENSXMAP00000037804RRM_1PF00076.222.3e-3813
ENSXMAP00000037804RRM_1PF00076.222.3e-3823
ENSXMAP00000037804RRM_1PF00076.222.3e-3833
ENSXMAP00000029133RRM_1PF00076.222.6e-3813
ENSXMAP00000029133RRM_1PF00076.222.6e-3823
ENSXMAP00000029133RRM_1PF00076.222.6e-3833
ENSXMAP00000009895RRM_1PF00076.222.8e-3813
ENSXMAP00000009895RRM_1PF00076.222.8e-3823
ENSXMAP00000009895RRM_1PF00076.222.8e-3833
ENSXMAP00000023309RRM_1PF00076.222.8e-3813
ENSXMAP00000023309RRM_1PF00076.222.8e-3823
ENSXMAP00000023309RRM_1PF00076.222.8e-3833
ENSXMAP00000033635RRM_1PF00076.222.8e-3813
ENSXMAP00000033635RRM_1PF00076.222.8e-3823
ENSXMAP00000033635RRM_1PF00076.222.8e-3833
ENSXMAP00000041446RRM_1PF00076.222.8e-3813
ENSXMAP00000041446RRM_1PF00076.222.8e-3823
ENSXMAP00000041446RRM_1PF00076.222.8e-3833
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000034448-2607XM_023334452ENSXMAP00000041037547 (aa)XP_023190220UPI000C6E1CDF
ENSXMAT00000028185-1767-ENSXMAP00000037804588 (aa)--
ENSXMAT00000037130-2817XM_023334447ENSXMAP00000041446617 (aa)XP_023190215UPI000293B573
ENSXMAT00000023619-2583XM_023334453ENSXMAP00000034556539 (aa)XP_023190221UPI000C6E2870
ENSXMAT00000027388-2793XM_023334450ENSXMAP00000029133609 (aa)XP_023190218UPI000C6D0CF8
ENSXMAT00000040275-2214XM_023334446ENSXMAP00000023309617 (aa)XP_023190214UPI000293B573
ENSXMAT00000024290-2150XM_023334448ENSXMAP00000033635617 (aa)XP_023190216UPI000293B573
ENSXMAT00000009909-2385XM_014472006ENSXMAP00000009895617 (aa)XP_014327492M4A601
Gene Model
Click here to download ENSXMAG00000009874's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000009874's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000009874rbm4710080.053ENSG00000163694RBM4710085.253Homo_sapiens
ENSXMAG00000009874rbm4710093.830ENSAPOG00000011062rbm4710093.830Acanthochromis_polyacanthus
ENSXMAG00000009874rbm479383.616ENSAMEG00000009672RBM4710076.206Ailuropoda_melanoleuca
ENSXMAG00000009874rbm4710090.339ENSACIG00000011531rbm479794.068Amphilophus_citrinellus
ENSXMAG00000009874rbm4710094.087ENSAOCG00000022245rbm4710094.087Amphiprion_ocellaris
ENSXMAG00000009874rbm4710094.087ENSAPEG00000018304rbm4710094.087Amphiprion_percula
ENSXMAG00000009874rbm4710092.443ENSATEG00000018400rbm4710092.443Anabas_testudineus
ENSXMAG00000009874rbm4710081.472ENSAPLG00000013974RBM4710076.756Anas_platyrhynchos
ENSXMAG00000009874rbm4710078.517ENSACAG00000011833RBM4710076.578Anolis_carolinensis
ENSXMAG00000009874rbm4710081.481ENSANAG00000029440RBM4710083.245Aotus_nancymaae
ENSXMAG00000009874rbm4710090.932ENSACLG00000016902rbm4710090.932Astatotilapia_calliptera
ENSXMAG00000009874rbm4710084.910ENSAMXG00000021794rbm4710081.951Astyanax_mexicanus
ENSXMAG00000009874rbm4710079.592ENSBTAG00000002356RBM4710077.685Bos_taurus
ENSXMAG00000009874rbm479784.594ENSCJAG00000019385RBM4710083.245Callithrix_jacchus
ENSXMAG00000009874rbm479384.136ENSCAFG00000015898RBM4710076.421Canis_familiaris
ENSXMAG00000009874rbm478379.226ENSCAFG00020010558RBM479481.432Canis_lupus_dingo
ENSXMAG00000009874rbm4710079.337ENSCHIG00000026214RBM4710077.517Capra_hircus
ENSXMAG00000009874rbm478486.099ENSTSYG00000033612RBM479384.956Carlito_syrichta
ENSXMAG00000009874rbm4710072.308ENSCAPG00000008426RBM4710074.332Cavia_aperea
ENSXMAG00000009874rbm4710080.902ENSCPOG00000014100RBM4710082.667Cavia_porcellus
ENSXMAG00000009874rbm479954.515ENSCCAG00000024397-9954.515Cebus_capucinus
ENSXMAG00000009874rbm4710083.245ENSCCAG00000030129-10083.245Cebus_capucinus
ENSXMAG00000009874rbm4710080.053ENSCATG00000042064RBM4710083.245Cercocebus_atys
ENSXMAG00000009874rbm4710080.371ENSCLAG00000001684RBM4710082.400Chinchilla_lanigera
ENSXMAG00000009874rbm479383.853ENSCSAG00000017060RBM4710077.000Chlorocebus_sabaeus
ENSXMAG00000009874rbm478677.251ENSCHOG00000011731RBM478877.079Choloepus_hoffmanni
ENSXMAG00000009874rbm4710082.653ENSCPBG00000013831RBM4710079.633Chrysemys_picta_bellii
ENSXMAG00000009874rbm4710081.217ENSCANG00000019997RBM4710083.245Colobus_angolensis_palliatus
ENSXMAG00000009874rbm4710081.915ENSCGRG00001000623-10083.245Cricetulus_griseus_chok1gshd
ENSXMAG00000009874rbm4710076.923ENSCGRG00001020102-10078.515Cricetulus_griseus_chok1gshd
ENSXMAG00000009874rbm4710077.694ENSCGRG00000007762-10082.278Cricetulus_griseus_crigri
ENSXMAG00000009874rbm479977.989ENSCGRG00000014760-9879.620Cricetulus_griseus_crigri
ENSXMAG00000009874rbm4710087.500ENSCSEG00000004545rbm4710087.500Cynoglossus_semilaevis
ENSXMAG00000009874rbm4710096.915ENSCVAG00000020144rbm4710096.915Cyprinodon_variegatus
ENSXMAG00000009874rbm4710086.445ENSDARG00000061985rbm4710082.219Danio_rerio
ENSXMAG00000009874rbm479385.352ENSDNOG00000046854RBM4710077.013Dasypus_novemcinctus
ENSXMAG00000009874rbm4710079.241ENSDORG00000010144Rbm4710076.159Dipodomys_ordii
ENSXMAG00000009874rbm479382.633ENSETEG00000009194RBM4710077.076Echinops_telfairi
ENSXMAG00000009874rbm4710058.484ENSEBUG00000011912rbm4710058.484Eptatretus_burgeri
ENSXMAG00000009874rbm479384.507ENSEASG00005008443RBM4710077.349Equus_asinus_asinus
ENSXMAG00000009874rbm479384.507ENSECAG00000004400RBM4710077.349Equus_caballus
ENSXMAG00000009874rbm477388.038ENSEEUG00000001194RBM477290.431Erinaceus_europaeus
ENSXMAG00000009874rbm4710088.161ENSELUG00000006148rbm4710087.406Esox_lucius
ENSXMAG00000009874rbm479383.616ENSFCAG00000012399RBM4710077.647Felis_catus
ENSXMAG00000009874rbm4710081.378ENSFALG00000002861RBM4710078.763Ficedula_albicollis
ENSXMAG00000009874rbm4710080.267ENSFDAG00000016326RBM4710080.267Fukomys_damarensis
ENSXMAG00000009874rbm4710096.474ENSFHEG00000007938rbm4710093.367Fundulus_heteroclitus
ENSXMAG00000009874rbm4710087.310ENSGMOG00000014802rbm4710086.548Gadus_morhua
ENSXMAG00000009874rbm477282.143ENSGALG00000014267RBM479984.309Gallus_gallus
ENSXMAG00000009874rbm477294.087ENSGAFG00000020571rbm479899.728Gambusia_affinis
ENSXMAG00000009874rbm4710089.460ENSGACG00000016223rbm4710089.460Gasterosteus_aculeatus
ENSXMAG00000009874rbm4710082.653ENSGAGG00000020051RBM4710079.466Gopherus_agassizii
ENSXMAG00000009874rbm4710080.053ENSGGOG00000001367RBM4710083.245Gorilla_gorilla
ENSXMAG00000009874rbm4710090.932ENSHBUG00000003520rbm4710090.932Haplochromis_burtoni
ENSXMAG00000009874rbm4710059.889ENSHGLG00000016914RBM4710079.747Heterocephalus_glaber_female
ENSXMAG00000009874rbm4710081.067ENSHGLG00100014028-10081.067Heterocephalus_glaber_male
ENSXMAG00000009874rbm4710075.192ENSHGLG00100003071-10074.425Heterocephalus_glaber_male
ENSXMAG00000009874rbm479991.517ENSHCOG00000002074rbm479991.517Hippocampus_comes
ENSXMAG00000009874rbm4710086.957ENSIPUG00000004743rbm4710083.249Ictalurus_punctatus
ENSXMAG00000009874rbm479383.898ENSSTOG00000004727RBM479883.967Ictidomys_tridecemlineatus
ENSXMAG00000009874rbm479385.593ENSJJAG00000013823Rbm4710075.874Jaculus_jaculus
ENSXMAG00000009874rbm4710093.077ENSKMAG00000000084rbm4710093.077Kryptolebias_marmoratus
ENSXMAG00000009874rbm4710092.031ENSLBEG00000008436rbm4710091.940Labrus_bergylta
ENSXMAG00000009874rbm479388.202ENSLACG00000007196RBM4710079.564Latimeria_chalumnae
ENSXMAG00000009874rbm479389.773ENSLOCG00000012966rbm479581.879Lepisosteus_oculatus
ENSXMAG00000009874rbm4710079.284ENSLAFG00000011998RBM4710077.554Loxodonta_africana
ENSXMAG00000009874rbm4710080.053ENSMFAG00000037967RBM4710083.245Macaca_fascicularis
ENSXMAG00000009874rbm479383.853ENSMMUG00000012036RBM4710083.420Macaca_mulatta
ENSXMAG00000009874rbm4710080.053ENSMNEG00000040774RBM4710083.245Macaca_nemestrina
ENSXMAG00000009874rbm4710082.857ENSMLEG00000041432RBM479789.116Mandrillus_leucophaeus
ENSXMAG00000009874rbm4710092.695ENSMAMG00000019143rbm4710092.695Mastacembelus_armatus
ENSXMAG00000009874rbm4710090.932ENSMZEG00005023659rbm4710090.932Maylandia_zebra
ENSXMAG00000009874rbm4710081.888ENSMGAG00000012226RBM4710079.201Meleagris_gallopavo
ENSXMAG00000009874rbm4710081.167ENSMAUG00000006493Rbm4710082.493Mesocricetus_auratus
ENSXMAG00000009874rbm479781.586ENSMICG00000026417RBM4710082.086Microcebus_murinus
ENSXMAG00000009874rbm4710081.117ENSMOCG00000021170Rbm4710082.447Microtus_ochrogaster
ENSXMAG00000009874rbm4710091.517ENSMMOG00000007260rbm4710091.517Mola_mola
ENSXMAG00000009874rbm475877.044ENSMODG00000015426-9778.387Monodelphis_domestica
ENSXMAG00000009874rbm4710078.005ENSMODG00000020561-9873.413Monodelphis_domestica
ENSXMAG00000009874rbm4710081.841ENSMODG00000007003RBM4710077.387Monodelphis_domestica
ENSXMAG00000009874rbm4710091.688ENSMALG00000005167rbm4710091.517Monopterus_albus
ENSXMAG00000009874rbm4710081.117MGP_CAROLIEiJ_G0027258Rbm4710082.447Mus_caroli
ENSXMAG00000009874rbm4710081.117ENSMUSG00000070780Rbm4710082.447Mus_musculus
ENSXMAG00000009874rbm4710081.117MGP_PahariEiJ_G0017040Rbm4710082.447Mus_pahari
ENSXMAG00000009874rbm4710081.117MGP_SPRETEiJ_G0028253Rbm4710082.447Mus_spretus
ENSXMAG00000009874rbm479384.746ENSMPUG00000006177RBM479477.090Mustela_putorius_furo
ENSXMAG00000009874rbm4710080.407ENSMLUG00000000889RBM4710076.183Myotis_lucifugus
ENSXMAG00000009874rbm4710081.122ENSNGAG00000003325Rbm4710076.167Nannospalax_galili
ENSXMAG00000009874rbm4710091.260ENSNBRG00000015092rbm4710089.070Neolamprologus_brichardi
ENSXMAG00000009874rbm4710080.053ENSNLEG00000017151RBM4710083.245Nomascus_leucogenys
ENSXMAG00000009874rbm477379.070ENSMEUG00000009516-10079.070Notamacropus_eugenii
ENSXMAG00000009874rbm478683.817ENSOPRG00000016507-7583.817Ochotona_princeps
ENSXMAG00000009874rbm479382.768ENSODEG00000004873RBM4710075.966Octodon_degus
ENSXMAG00000009874rbm4710092.031ENSONIG00000009061rbm4710089.655Oreochromis_niloticus
ENSXMAG00000009874rbm4710081.330ENSOANG00000008978RBM4710077.667Ornithorhynchus_anatinus
ENSXMAG00000009874rbm4710079.028ENSOCUG00000012034RBM4710077.517Oryctolagus_cuniculus
ENSXMAG00000009874rbm4710091.026ENSORLG00000005847rbm4710091.026Oryzias_latipes
ENSXMAG00000009874rbm4710091.026ENSORLG00020005154rbm4710091.026Oryzias_latipes_hni
ENSXMAG00000009874rbm4710091.026ENSORLG00015000066rbm4710091.026Oryzias_latipes_hsok
ENSXMAG00000009874rbm4710090.488ENSOMEG00000010730rbm4710090.488Oryzias_melastigma
ENSXMAG00000009874rbm479385.028ENSOGAG00000029367-10076.756Otolemur_garnettii
ENSXMAG00000009874rbm479377.966ENSOGAG00000025193-10070.756Otolemur_garnettii
ENSXMAG00000009874rbm4710068.367ENSOARG00000012711RBM4710069.799Ovis_aries
ENSXMAG00000009874rbm479383.853ENSPPAG00000029763RBM479583.245Pan_paniscus
ENSXMAG00000009874rbm4710081.333ENSPPRG00000012873RBM4710082.933Panthera_pardus
ENSXMAG00000009874rbm478185.664ENSPTIG00000017046RBM4710074.111Panthera_tigris_altaica
ENSXMAG00000009874rbm4710080.053ENSPTRG00000016006RBM4710083.245Pan_troglodytes
ENSXMAG00000009874rbm4710080.053ENSPANG00000005980RBM4710083.245Papio_anubis
ENSXMAG00000009874rbm479881.282ENSPKIG00000005037rbm4710084.143Paramormyrops_kingsleyae
ENSXMAG00000009874rbm479985.559ENSPKIG00000013431RBM479883.548Paramormyrops_kingsleyae
ENSXMAG00000009874rbm478882.653ENSPSIG00000017516RBM479781.096Pelodiscus_sinensis
ENSXMAG00000009874rbm4710089.322ENSPMGG00000018540rbm4710089.322Periophthalmus_magnuspinnatus
ENSXMAG00000009874rbm4710081.117ENSPEMG00000011088Rbm4710082.447Peromyscus_maniculatus_bairdii
ENSXMAG00000009874rbm4710099.233ENSPFOG00000007997rbm4710099.233Poecilia_formosa
ENSXMAG00000009874rbm4710098.977ENSPLAG00000002072rbm4710098.977Poecilia_latipinna
ENSXMAG00000009874rbm4710098.992ENSPMEG00000017492rbm4710098.972Poecilia_mexicana
ENSXMAG00000009874rbm4710098.992ENSPREG00000008456rbm4710098.972Poecilia_reticulata
ENSXMAG00000009874rbm479373.876ENSPPYG00000014688RBM479868.836Pongo_abelii
ENSXMAG00000009874rbm478977.387ENSPCAG00000011879RBM478183.459Procavia_capensis
ENSXMAG00000009874rbm4710079.787ENSPCOG00000023451RBM4710081.915Propithecus_coquereli
ENSXMAG00000009874rbm479383.427ENSPVAG00000003812RBM4710076.795Pteropus_vampyrus
ENSXMAG00000009874rbm4710090.746ENSPNYG00000022868rbm4710088.455Pundamilia_nyererei
ENSXMAG00000009874rbm4710085.934ENSPNAG00000007940rbm4710082.792Pygocentrus_nattereri
ENSXMAG00000009874rbm4710078.426ENSRNOG00000002408Rbm4710076.461Rattus_norvegicus
ENSXMAG00000009874rbm4710081.217ENSRBIG00000039601RBM4710083.245Rhinopithecus_bieti
ENSXMAG00000009874rbm4710081.217ENSRROG00000044696RBM4710083.245Rhinopithecus_roxellana
ENSXMAG00000009874rbm4710073.322ENSSBOG00000028475RBM4710079.630Saimiri_boliviensis_boliviensis
ENSXMAG00000009874rbm4710081.586ENSSHAG00000017576RBM479686.723Sarcophilus_harrisii
ENSXMAG00000009874rbm479977.133ENSSFOG00015024101RBM479976.910Scleropages_formosus
ENSXMAG00000009874rbm4710077.250ENSSFOG00015012445rbm4710083.418Scleropages_formosus
ENSXMAG00000009874rbm4710091.003ENSSMAG00000009744rbm4710091.184Scophthalmus_maximus
ENSXMAG00000009874rbm4710091.521ENSSDUG00000022684rbm4710091.521Seriola_dumerili
ENSXMAG00000009874rbm4710091.771ENSSLDG00000003109rbm4710091.771Seriola_lalandi_dorsalis
ENSXMAG00000009874rbm478578.761ENSSARG00000001735RBM478481.416Sorex_araneus
ENSXMAG00000009874rbm4710083.598ENSSPUG00000007515RBM4710083.598Sphenodon_punctatus
ENSXMAG00000009874rbm4710093.573ENSSPAG00000001257rbm4710093.573Stegastes_partitus
ENSXMAG00000009874rbm4710081.217ENSSSCG00000008796RBM4710077.517Sus_scrofa
ENSXMAG00000009874rbm4710081.633ENSTGUG00000008705RBM4710078.392Taeniopygia_guttata
ENSXMAG00000009874rbm4710088.435ENSTRUG00000014050rbm4710088.265Takifugu_rubripes
ENSXMAG00000009874rbm4710090.231ENSTNIG00000006127rbm4710087.685Tetraodon_nigroviridis
ENSXMAG00000009874rbm478183.003ENSTBEG00000001607RBM477384.181Tupaia_belangeri
ENSXMAG00000009874rbm479385.070ENSTTRG00000002839RBM4710077.181Tursiops_truncatus
ENSXMAG00000009874rbm479383.616ENSUAMG00000021346RBM4710076.589Ursus_americanus
ENSXMAG00000009874rbm475284.000ENSVPAG00000000641-5388.710Vicugna_pacos
ENSXMAG00000009874rbm479384.703ENSVVUG00000014774RBM4710076.549Vulpes_vulpes
ENSXMAG00000009874rbm4710081.472ENSXETG00000012802rbm4710078.595Xenopus_tropicalis
ENSXMAG00000009874rbm4710095.733ENSXCOG00000000780rbm4710099.728Xiphophorus_couchianus

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