EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000010013 (Gene tree)
Gene ID: 102233839
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3728 bases
Position: chr20:27276925-27280652
Accession: 102233839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000010033	FDF	PF09532.10	1.1e-06	1	1
ENSXMAP00000010033	SM-ATX	PF14438.6	4e-08	1	1
ENSXMAP00000010033	LSM14	PF12701.7	5.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000010047	-	1649	XM_023325667	ENSXMAP00000010033	368 (aa)	XP_023181435	M4A6D9

Gene Model

Click here to download ENSXMAG00000010013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000010013	lsm14b	92	49.185	ENSG00000149657	LSM14B	100	45.659	Homo_sapiens
ENSXMAG00000010013	lsm14b	100	74.595	ENSAPOG00000001780	lsm14b	100	74.595	Acanthochromis_polyacanthus
ENSXMAG00000010013	lsm14b	91	43.921	ENSAMEG00000013430	LSM14B	91	43.970	Ailuropoda_melanoleuca
ENSXMAG00000010013	lsm14b	99	69.231	ENSACIG00000012266	lsm14b	99	69.231	Amphilophus_citrinellus
ENSXMAG00000010013	lsm14b	61	36.626	ENSACIG00000003147	LSM14B	87	36.017	Amphilophus_citrinellus
ENSXMAG00000010013	lsm14b	94	44.681	ENSAOCG00000006667	LSM14B	89	44.134	Amphiprion_ocellaris
ENSXMAG00000010013	lsm14b	100	75.135	ENSAOCG00000012380	lsm14b	100	75.135	Amphiprion_ocellaris
ENSXMAG00000010013	lsm14b	100	67.209	ENSAPEG00000023633	lsm14b	100	67.209	Amphiprion_percula
ENSXMAG00000010013	lsm14b	65	36.042	ENSATEG00000015895	LSM14B	88	36.364	Anabas_testudineus
ENSXMAG00000010013	lsm14b	91	71.053	ENSATEG00000016603	lsm14b	100	69.867	Anabas_testudineus
ENSXMAG00000010013	lsm14b	82	42.276	ENSAPLG00000013203	LSM14B	90	42.033	Anas_platyrhynchos
ENSXMAG00000010013	lsm14b	91	49.030	ENSACAG00000016195	LSM14B	89	49.157	Anolis_carolinensis
ENSXMAG00000010013	lsm14b	92	49.864	ENSANAG00000037915	LSM14B	90	50.275	Aotus_nancymaae
ENSXMAG00000010013	lsm14b	54	40.187	ENSACLG00000019624	-	67	37.563	Astatotilapia_calliptera
ENSXMAG00000010013	lsm14b	54	38.785	ENSACLG00000011955	-	66	35.714	Astatotilapia_calliptera
ENSXMAG00000010013	lsm14b	100	70.541	ENSACLG00000019663	lsm14b	100	70.541	Astatotilapia_calliptera
ENSXMAG00000010013	lsm14b	90	52.210	ENSAMXG00000002865	lsm14b	90	54.622	Astyanax_mexicanus
ENSXMAG00000010013	lsm14b	92	46.173	ENSBTAG00000021558	LSM14B	91	46.000	Bos_taurus
ENSXMAG00000010013	lsm14b	92	49.733	ENSCJAG00000014434	LSM14B	90	49.322	Callithrix_jacchus
ENSXMAG00000010013	lsm14b	81	41.144	ENSCAFG00000012518	LSM14B	89	41.436	Canis_familiaris
ENSXMAG00000010013	lsm14b	92	49.330	ENSCAFG00020022150	LSM14B	90	48.913	Canis_lupus_dingo
ENSXMAG00000010013	lsm14b	92	49.468	ENSCHIG00000010284	-	90	50.416	Capra_hircus
ENSXMAG00000010013	lsm14b	99	39.702	ENSCHIG00000022681	-	90	39.503	Capra_hircus
ENSXMAG00000010013	lsm14b	80	44.479	ENSTSYG00000031914	LSM14B	79	43.925	Carlito_syrichta
ENSXMAG00000010013	lsm14b	81	45.963	ENSCAPG00000013059	LSM14B	89	45.426	Cavia_aperea
ENSXMAG00000010013	lsm14b	80	45.171	ENSCPOG00000038080	LSM14B	89	44.620	Cavia_porcellus
ENSXMAG00000010013	lsm14b	92	49.593	ENSCCAG00000021267	LSM14B	90	49.864	Cebus_capucinus
ENSXMAG00000010013	lsm14b	92	36.813	ENSCCAG00000024900	-	76	34.465	Cebus_capucinus
ENSXMAG00000010013	lsm14b	92	49.322	ENSCATG00000036006	LSM14B	90	48.901	Cercocebus_atys
ENSXMAG00000010013	lsm14b	80	45.794	ENSCLAG00000003186	LSM14B	89	45.253	Chinchilla_lanigera
ENSXMAG00000010013	lsm14b	92	45.025	ENSCSAG00000015729	LSM14B	91	45.340	Chlorocebus_sabaeus
ENSXMAG00000010013	lsm14b	91	45.614	ENSCPBG00000027065	LSM14B	99	46.047	Chrysemys_picta_bellii
ENSXMAG00000010013	lsm14b	80	45.538	ENSCANG00000036986	LSM14B	89	44.860	Colobus_angolensis_palliatus
ENSXMAG00000010013	lsm14b	92	50.275	ENSCGRG00001018399	Lsm14b	90	49.304	Cricetulus_griseus_chok1gshd
ENSXMAG00000010013	lsm14b	61	34.708	ENSCGRG00000006111	-	90	34.892	Cricetulus_griseus_crigri
ENSXMAG00000010013	lsm14b	100	68.883	ENSCSEG00000004722	lsm14b	100	68.883	Cynoglossus_semilaevis
ENSXMAG00000010013	lsm14b	94	47.059	ENSCSEG00000020669	LSM14B	90	47.042	Cynoglossus_semilaevis
ENSXMAG00000010013	lsm14b	64	35.317	ENSCVAG00000012433	-	89	34.583	Cyprinodon_variegatus
ENSXMAG00000010013	lsm14b	91	52.925	ENSDARG00000025386	lsm14b	90	52.125	Danio_rerio
ENSXMAG00000010013	lsm14b	61	37.413	ENSDNOG00000025246	LSM14B	88	37.011	Dasypus_novemcinctus
ENSXMAG00000010013	lsm14b	81	45.988	ENSDORG00000016683	Lsm14b	78	45.455	Dipodomys_ordii
ENSXMAG00000010013	lsm14b	57	35.242	ENSETEG00000011188	-	99	35.417	Echinops_telfairi
ENSXMAG00000010013	lsm14b	92	39.889	ENSETEG00000001869	-	89	39.193	Echinops_telfairi
ENSXMAG00000010013	lsm14b	61	39.271	ENSEASG00005023218	LSM14B	85	38.430	Equus_asinus_asinus
ENSXMAG00000010013	lsm14b	92	49.322	ENSECAG00000010659	LSM14B	90	48.901	Equus_caballus
ENSXMAG00000010013	lsm14b	55	62.245	ENSEEUG00000007331	LSM14B	78	62.245	Erinaceus_europaeus
ENSXMAG00000010013	lsm14b	90	47.674	ENSELUG00000016299	LSM14B	90	49.128	Esox_lucius
ENSXMAG00000010013	lsm14b	98	56.878	ENSELUG00000005780	lsm14b	90	56.196	Esox_lucius
ENSXMAG00000010013	lsm14b	92	49.051	ENSFCAG00000003248	LSM14B	90	48.626	Felis_catus
ENSXMAG00000010013	lsm14b	81	42.896	ENSFALG00000010618	LSM14B	100	43.467	Ficedula_albicollis
ENSXMAG00000010013	lsm14b	80	46.417	ENSFDAG00000002214	LSM14B	89	45.886	Fukomys_damarensis
ENSXMAG00000010013	lsm14b	100	78.437	ENSFHEG00000006237	lsm14b	100	78.437	Fundulus_heteroclitus
ENSXMAG00000010013	lsm14b	70	48.364	ENSFHEG00000003362	LSM14B	71	47.719	Fundulus_heteroclitus
ENSXMAG00000010013	lsm14b	100	59.200	ENSGMOG00000017115	lsm14b	99	58.133	Gadus_morhua
ENSXMAG00000010013	lsm14b	91	48.219	ENSGALG00000005125	LSM14B	99	49.874	Gallus_gallus
ENSXMAG00000010013	lsm14b	65	38.911	ENSGAFG00000013723	LSM14B	85	38.197	Gambusia_affinis
ENSXMAG00000010013	lsm14b	100	87.871	ENSGAFG00000020318	lsm14b	100	87.871	Gambusia_affinis
ENSXMAG00000010013	lsm14b	99	67.473	ENSGACG00000009973	lsm14b	99	67.473	Gasterosteus_aculeatus
ENSXMAG00000010013	lsm14b	52	39.151	ENSGAGG00000004106	LSM14B	91	40.816	Gopherus_agassizii
ENSXMAG00000010013	lsm14b	82	45.015	ENSGGOG00000005630	LSM14B	85	44.343	Gorilla_gorilla
ENSXMAG00000010013	lsm14b	92	49.725	ENSHGLG00000015055	LSM14B	90	49.304	Heterocephalus_glaber_female
ENSXMAG00000010013	lsm14b	80	45.597	ENSHGLG00100015273	LSM14B	89	45.048	Heterocephalus_glaber_male
ENSXMAG00000010013	lsm14b	94	44.772	ENSHCOG00000018747	LSM14B	90	45.170	Hippocampus_comes
ENSXMAG00000010013	lsm14b	59	47.982	ENSHCOG00000004867	lsm14b	100	50.781	Hippocampus_comes
ENSXMAG00000010013	lsm14b	90	54.444	ENSIPUG00000014946	lsm14b	85	56.410	Ictalurus_punctatus
ENSXMAG00000010013	lsm14b	80	46.417	ENSSTOG00000020482	LSM14B	89	45.886	Ictidomys_tridecemlineatus
ENSXMAG00000010013	lsm14b	91	50.000	ENSJJAG00000012728	Lsm14b	89	48.588	Jaculus_jaculus
ENSXMAG00000010013	lsm14b	51	38.571	ENSKMAG00000012834	-	86	40.488	Kryptolebias_marmoratus
ENSXMAG00000010013	lsm14b	91	77.745	ENSKMAG00000017524	lsm14b	92	77.745	Kryptolebias_marmoratus
ENSXMAG00000010013	lsm14b	68	37.023	ENSLBEG00000007951	LSM14B	85	35.088	Labrus_bergylta
ENSXMAG00000010013	lsm14b	91	44.096	ENSLACG00000003849	LSM14B	91	46.250	Latimeria_chalumnae
ENSXMAG00000010013	lsm14b	99	52.713	ENSLOCG00000003746	lsm14b	99	52.972	Lepisosteus_oculatus
ENSXMAG00000010013	lsm14b	82	44.444	ENSLAFG00000007492	LSM14B	89	43.750	Loxodonta_africana
ENSXMAG00000010013	lsm14b	92	49.185	ENSMFAG00000041479	LSM14B	90	48.626	Macaca_fascicularis
ENSXMAG00000010013	lsm14b	92	49.185	ENSMMUG00000014084	LSM14B	90	48.626	Macaca_mulatta
ENSXMAG00000010013	lsm14b	92	49.185	ENSMNEG00000045573	LSM14B	90	48.626	Macaca_nemestrina
ENSXMAG00000010013	lsm14b	80	45.706	ENSMLEG00000040895	LSM14B	89	45.171	Mandrillus_leucophaeus
ENSXMAG00000010013	lsm14b	100	71.467	ENSMAMG00000020539	lsm14b	100	71.467	Mastacembelus_armatus
ENSXMAG00000010013	lsm14b	93	48.468	ENSMAMG00000024124	LSM14B	89	47.633	Mastacembelus_armatus
ENSXMAG00000010013	lsm14b	100	70.811	ENSMZEG00005000987	lsm14b	100	70.811	Maylandia_zebra
ENSXMAG00000010013	lsm14b	54	38.164	ENSMZEG00005002688	-	65	35.533	Maylandia_zebra
ENSXMAG00000010013	lsm14b	91	44.290	ENSMZEG00005026001	LSM14B	93	46.307	Maylandia_zebra
ENSXMAG00000010013	lsm14b	54	37.681	ENSMZEG00005026087	-	65	35.025	Maylandia_zebra
ENSXMAG00000010013	lsm14b	82	44.478	ENSMGAG00000005300	LSM14B	99	46.594	Meleagris_gallopavo
ENSXMAG00000010013	lsm14b	92	49.725	ENSMAUG00000020700	Lsm14b	90	48.747	Mesocricetus_auratus
ENSXMAG00000010013	lsm14b	92	50.136	ENSMICG00000014675	LSM14B	90	49.725	Microcebus_murinus
ENSXMAG00000010013	lsm14b	92	50.549	ENSMOCG00000020600	Lsm14b	90	49.582	Microtus_ochrogaster
ENSXMAG00000010013	lsm14b	52	36.232	ENSMOCG00000005119	-	91	32.692	Microtus_ochrogaster
ENSXMAG00000010013	lsm14b	90	47.522	ENSMMOG00000017321	LSM14B	89	46.903	Mola_mola
ENSXMAG00000010013	lsm14b	89	62.953	ENSMMOG00000020042	lsm14b	93	62.953	Mola_mola
ENSXMAG00000010013	lsm14b	61	36.396	ENSMODG00000016690	LSM14B	88	36.331	Monodelphis_domestica
ENSXMAG00000010013	lsm14b	100	69.730	ENSMALG00000004783	lsm14b	89	71.217	Monopterus_albus
ENSXMAG00000010013	lsm14b	91	45.915	ENSMALG00000022251	LSM14B	89	45.821	Monopterus_albus
ENSXMAG00000010013	lsm14b	92	50.000	MGP_CAROLIEiJ_G0024770	Lsm14b	90	49.582	Mus_caroli
ENSXMAG00000010013	lsm14b	92	50.000	ENSMUSG00000039108	Lsm14b	90	49.582	Mus_musculus
ENSXMAG00000010013	lsm14b	92	50.000	MGP_PahariEiJ_G0026214	Lsm14b	90	49.582	Mus_pahari
ENSXMAG00000010013	lsm14b	92	50.000	MGP_SPRETEiJ_G0025693	Lsm14b	90	49.582	Mus_spretus
ENSXMAG00000010013	lsm14b	86	40.470	ENSMPUG00000007584	LSM14B	91	40.741	Mustela_putorius_furo
ENSXMAG00000010013	lsm14b	91	50.273	ENSMLUG00000000304	LSM14B	90	50.273	Myotis_lucifugus
ENSXMAG00000010013	lsm14b	53	39.908	ENSNGAG00000016550	Lsm14b	84	38.164	Nannospalax_galili
ENSXMAG00000010013	lsm14b	80	45.538	ENSNLEG00000015757	LSM14B	89	44.860	Nomascus_leucogenys
ENSXMAG00000010013	lsm14b	65	68.794	ENSMEUG00000008267	-	69	68.794	Notamacropus_eugenii
ENSXMAG00000010013	lsm14b	92	49.593	ENSODEG00000004099	LSM14B	90	49.176	Octodon_degus
ENSXMAG00000010013	lsm14b	100	71.622	ENSONIG00000020318	lsm14b	100	71.622	Oreochromis_niloticus
ENSXMAG00000010013	lsm14b	74	49.474	ENSOANG00000003370	LSM14B	96	49.825	Ornithorhynchus_anatinus
ENSXMAG00000010013	lsm14b	81	45.092	ENSOCUG00000006279	LSM14B	89	46.273	Oryctolagus_cuniculus
ENSXMAG00000010013	lsm14b	92	41.667	ENSORLG00000028353	LSM14B	90	41.595	Oryzias_latipes
ENSXMAG00000010013	lsm14b	100	73.913	ENSORLG00000013525	lsm14b	100	75.000	Oryzias_latipes
ENSXMAG00000010013	lsm14b	62	32.558	ENSORLG00020018191	-	85	32.129	Oryzias_latipes_hni
ENSXMAG00000010013	lsm14b	100	73.913	ENSORLG00020020553	lsm14b	100	75.000	Oryzias_latipes_hni
ENSXMAG00000010013	lsm14b	92	41.944	ENSORLG00015013157	LSM14B	90	41.880	Oryzias_latipes_hsok
ENSXMAG00000010013	lsm14b	100	73.913	ENSORLG00015016862	lsm14b	100	75.000	Oryzias_latipes_hsok
ENSXMAG00000010013	lsm14b	100	73.098	ENSOMEG00000023917	lsm14b	100	74.185	Oryzias_melastigma
ENSXMAG00000010013	lsm14b	63	35.745	ENSOMEG00000000171	-	83	34.821	Oryzias_melastigma
ENSXMAG00000010013	lsm14b	92	45.409	ENSOGAG00000003915	LSM14B	91	45.729	Otolemur_garnettii
ENSXMAG00000010013	lsm14b	83	41.316	ENSOARG00000014706	LSM14B	90	41.067	Ovis_aries
ENSXMAG00000010013	lsm14b	82	45.015	ENSPPAG00000035799	LSM14B	85	44.343	Pan_paniscus
ENSXMAG00000010013	lsm14b	92	49.051	ENSPPRG00000009197	LSM14B	90	48.626	Panthera_pardus
ENSXMAG00000010013	lsm14b	61	38.800	ENSPTIG00000021518	LSM14B	88	37.959	Panthera_tigris_altaica
ENSXMAG00000010013	lsm14b	92	49.185	ENSPTRG00000013696	LSM14B	90	48.626	Pan_troglodytes
ENSXMAG00000010013	lsm14b	92	49.322	ENSPANG00000011747	LSM14B	90	48.901	Papio_anubis
ENSXMAG00000010013	lsm14b	99	55.236	ENSPKIG00000003275	lsm14b	94	74.286	Paramormyrops_kingsleyae
ENSXMAG00000010013	lsm14b	81	46.246	ENSPSIG00000014762	LSM14B	100	46.301	Pelodiscus_sinensis
ENSXMAG00000010013	lsm14b	91	50.696	ENSPEMG00000017688	Lsm14b	90	49.718	Peromyscus_maniculatus_bairdii
ENSXMAG00000010013	lsm14b	92	50.136	ENSPCIG00000013405	LSM14B	90	49.725	Phascolarctos_cinereus
ENSXMAG00000010013	lsm14b	100	91.057	ENSPFOG00000005631	lsm14b	100	91.057	Poecilia_formosa
ENSXMAG00000010013	lsm14b	100	91.057	ENSPLAG00000002449	lsm14b	100	91.057	Poecilia_latipinna
ENSXMAG00000010013	lsm14b	89	47.143	ENSPLAG00000005793	LSM14B	89	47.143	Poecilia_latipinna
ENSXMAG00000010013	lsm14b	100	91.599	ENSPMEG00000000745	lsm14b	100	91.599	Poecilia_mexicana
ENSXMAG00000010013	lsm14b	88	46.784	ENSPMEG00000022953	LSM14B	89	47.293	Poecilia_mexicana
ENSXMAG00000010013	lsm14b	61	36.948	ENSPREG00000007828	LSM14B	85	36.179	Poecilia_reticulata
ENSXMAG00000010013	lsm14b	92	49.864	ENSPCOG00000013625	LSM14B	90	49.451	Propithecus_coquereli
ENSXMAG00000010013	lsm14b	90	54.930	ENSPNAG00000012777	lsm14b	90	56.125	Pygocentrus_nattereri
ENSXMAG00000010013	lsm14b	92	45.409	ENSRNOG00000054557	Lsm14b	91	45.226	Rattus_norvegicus
ENSXMAG00000010013	lsm14b	81	45.706	ENSRBIG00000033461	LSM14B	88	45.031	Rhinopithecus_bieti
ENSXMAG00000010013	lsm14b	82	46.386	ENSRROG00000042949	LSM14B	81	45.732	Rhinopithecus_roxellana
ENSXMAG00000010013	lsm14b	80	46.012	ENSSBOG00000032820	LSM14B	89	45.483	Saimiri_boliviensis_boliviensis
ENSXMAG00000010013	lsm14b	82	46.246	ENSSHAG00000015528	LSM14B	87	45.732	Sarcophilus_harrisii
ENSXMAG00000010013	lsm14b	90	55.072	ENSSFOG00015004627	lsm14b	91	55.072	Scleropages_formosus
ENSXMAG00000010013	lsm14b	96	46.194	ENSSMAG00000000135	LSM14B	89	47.606	Scophthalmus_maximus
ENSXMAG00000010013	lsm14b	100	72.606	ENSSMAG00000012725	lsm14b	100	72.606	Scophthalmus_maximus
ENSXMAG00000010013	lsm14b	100	74.064	ENSSDUG00000020977	lsm14b	100	74.064	Seriola_dumerili
ENSXMAG00000010013	lsm14b	91	48.295	ENSSDUG00000022770	LSM14B	89	48.256	Seriola_dumerili
ENSXMAG00000010013	lsm14b	61	41.270	ENSSLDG00000011354	-	88	40.873	Seriola_lalandi_dorsalis
ENSXMAG00000010013	lsm14b	51	36.842	ENSSARG00000007749	-	96	38.278	Sorex_araneus
ENSXMAG00000010013	lsm14b	91	46.750	ENSSPUG00000014360	LSM14B	95	47.429	Sphenodon_punctatus
ENSXMAG00000010013	lsm14b	100	72.087	ENSSPAG00000020915	lsm14b	100	72.087	Stegastes_partitus
ENSXMAG00000010013	lsm14b	67	37.868	ENSSPAG00000018854	-	97	37.407	Stegastes_partitus
ENSXMAG00000010013	lsm14b	92	49.864	ENSSSCG00000026052	LSM14B	75	49.725	Sus_scrofa
ENSXMAG00000010013	lsm14b	81	48.012	ENSTGUG00000007884	LSM14B	100	48.189	Taeniopygia_guttata
ENSXMAG00000010013	lsm14b	100	67.925	ENSTRUG00000011354	lsm14b	100	67.925	Takifugu_rubripes
ENSXMAG00000010013	lsm14b	91	47.645	ENSTRUG00000001529	LSM14B	90	49.280	Takifugu_rubripes
ENSXMAG00000010013	lsm14b	100	64.031	ENSTNIG00000002445	lsm14b	100	64.031	Tetraodon_nigroviridis
ENSXMAG00000010013	lsm14b	89	43.251	ENSUAMG00000025298	LSM14B	89	42.737	Ursus_americanus
ENSXMAG00000010013	lsm14b	89	43.251	ENSUMAG00000000480	LSM14B	89	42.737	Ursus_maritimus
ENSXMAG00000010013	lsm14b	81	45.646	ENSVVUG00000015920	LSM14B	88	45.231	Vulpes_vulpes
ENSXMAG00000010013	lsm14b	85	48.276	ENSXETG00000001997	lsm14b	99	49.560	Xenopus_tropicalis