EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000010333 (Gene tree)
Gene ID
102216794
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
41933 bases
Position
chr11:30601957-30643889
Accession
102216794
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000010389tRNA_anti-codonPF01336.253.6e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000010403RPA1 (1 of many)-2015118XM_023342731ENSXMAP00000010389700 (aa)XP_023198499M4A7E5
Gene Model
Click here to download ENSXMAG00000010333's gene model file
Pathways
Pathway IDPathway NameSource
xma03030DNA replicationKEGG
xma03420Nucleotide excision repairKEGG
xma03430Mismatch repairKEGG
xma03440Homologous recombinationKEGG
xma03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010333's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000010333RPA18171.167ENSAPOG00000011658rpa19371.167Acanthochromis_polyacanthus
ENSXMAG00000010333RPA19974.859ENSAPOG00000019409RPA19974.859Acanthochromis_polyacanthus
ENSXMAG00000010333RPA18363.348ENSAMEG00000007706RPA19260.334Ailuropoda_melanoleuca
ENSXMAG00000010333RPA19669.037ENSACIG00000012881RPA19969.481Amphilophus_citrinellus
ENSXMAG00000010333RPA17861.416ENSACIG00000007277rpa19361.416Amphilophus_citrinellus
ENSXMAG00000010333RPA19971.857ENSAOCG00000009003RPA19971.857Amphiprion_ocellaris
ENSXMAG00000010333RPA18171.396ENSAOCG00000023376rpa19471.396Amphiprion_ocellaris
ENSXMAG00000010333RPA19973.870ENSAPEG00000019132RPA19974.011Amphiprion_percula
ENSXMAG00000010333RPA18171.625ENSAPEG00000008634rpa19471.625Amphiprion_percula
ENSXMAG00000010333RPA19969.972ENSATEG00000006443RPA19969.830Anabas_testudineus
ENSXMAG00000010333RPA17571.101ENSATEG00000022024rpa19371.101Anabas_testudineus
ENSXMAG00000010333RPA17964.400ENSAPLG00000012442RPA18664.400Anas_platyrhynchos
ENSXMAG00000010333RPA18157.174ENSACAG00000014490RPA19757.112Anolis_carolinensis
ENSXMAG00000010333RPA19261.684ENSANAG00000023456RPA19861.684Aotus_nancymaae
ENSXMAG00000010333RPA110069.787ENSACLG00000005223RPA110069.787Astatotilapia_calliptera
ENSXMAG00000010333RPA17472.311ENSACLG00000006640rpa19372.311Astatotilapia_calliptera
ENSXMAG00000010333RPA18170.429ENSAMXG00000008418rpa19770.429Astyanax_mexicanus
ENSXMAG00000010333RPA19358.990ENSBTAG00000009711RPA19958.990Bos_taurus
ENSXMAG00000010333RPA16132.258WBGene00017546rpa-16831.486Caenorhabditis_elegans
ENSXMAG00000010333RPA19461.229ENSCJAG00000001848RPA19963.311Callithrix_jacchus
ENSXMAG00000010333RPA18963.265ENSCAFG00000019249RPA19163.492Canis_familiaris
ENSXMAG00000010333RPA18963.265ENSCAFG00020009847RPA19163.492Canis_lupus_dingo
ENSXMAG00000010333RPA17963.781ENSCHIG00000026308RPA19163.781Capra_hircus
ENSXMAG00000010333RPA18463.492ENSTSYG00000003482-9163.492Carlito_syrichta
ENSXMAG00000010333RPA18864.384ENSCPOG00000000035RPA19164.384Cavia_porcellus
ENSXMAG00000010333RPA19151.556ENSCCAG00000010981RPA19951.556Cebus_capucinus
ENSXMAG00000010333RPA19060.183ENSCLAG00000015045-9960.183Chinchilla_lanigera
ENSXMAG00000010333RPA19065.297ENSCLAG00000005185-9965.297Chinchilla_lanigera
ENSXMAG00000010333RPA17951.261ENSCSAG00000013833RPA19051.577Chlorocebus_sabaeus
ENSXMAG00000010333RPA18264.318ENSCHOG00000013540-9064.318Choloepus_hoffmanni
ENSXMAG00000010333RPA16264.220ENSCHOG00000009454-9964.220Choloepus_hoffmanni
ENSXMAG00000010333RPA18365.227ENSCPBG00000020377RPA19165.227Chrysemys_picta_bellii
ENSXMAG00000010333RPA18947.312ENSCING00000023482-9947.312Ciona_intestinalis
ENSXMAG00000010333RPA18163.946ENSCANG00000030911RPA19863.946Colobus_angolensis_palliatus
ENSXMAG00000010333RPA18563.991ENSCGRG00001008197Rpa19063.991Cricetulus_griseus_chok1gshd
ENSXMAG00000010333RPA16263.991ENSCGRG00000000582Rpa18563.991Cricetulus_griseus_crigri
ENSXMAG00000010333RPA19960.515ENSCSEG00000012726RPA19960.086Cynoglossus_semilaevis
ENSXMAG00000010333RPA18869.108ENSCSEG00000013066rpa19369.108Cynoglossus_semilaevis
ENSXMAG00000010333RPA18168.904ENSCVAG00000019431rpa19568.904Cyprinodon_variegatus
ENSXMAG00000010333RPA19779.265ENSCVAG00000013446-9679.118Cyprinodon_variegatus
ENSXMAG00000010333RPA18370.429ENSDARG00000003938rpa19470.429Danio_rerio
ENSXMAG00000010333RPA18464.220ENSDNOG00000017218RPA18964.220Dasypus_novemcinctus
ENSXMAG00000010333RPA19361.667ENSDORG00000006199Rpa19761.667Dipodomys_ordii
ENSXMAG00000010333RPA18044.573FBgn0010173RpA-709044.804Drosophila_melanogaster
ENSXMAG00000010333RPA18162.887ENSETEG00000017608RPA18262.887Echinops_telfairi
ENSXMAG00000010333RPA18662.151ENSEASG00005009372RPA19964.465Equus_asinus_asinus
ENSXMAG00000010333RPA18564.465ENSECAG00000023886RPA19164.465Equus_caballus
ENSXMAG00000010333RPA15964.115ENSEEUG00000002186-6864.115Erinaceus_europaeus
ENSXMAG00000010333RPA16070.983ENSELUG00000006136RPA19270.983Esox_lucius
ENSXMAG00000010333RPA18467.174ENSELUG00000021071rpa19767.174Esox_lucius
ENSXMAG00000010333RPA18963.758ENSFCAG00000006306RPA19963.758Felis_catus
ENSXMAG00000010333RPA19059.091ENSFALG00000006575RPA19859.091Ficedula_albicollis
ENSXMAG00000010333RPA18964.692ENSFDAG00000007720RPA110064.692Fukomys_damarensis
ENSXMAG00000010333RPA17968.721ENSFHEG00000003580rpa19268.721Fundulus_heteroclitus
ENSXMAG00000010333RPA17969.108ENSGMOG00000010382rpa19669.108Gadus_morhua
ENSXMAG00000010333RPA18959.006ENSGALG00000003072RPA19859.006Gallus_gallus
ENSXMAG00000010333RPA17969.266ENSGAFG00000012916rpa19269.266Gambusia_affinis
ENSXMAG00000010333RPA110090.143ENSGAFG00000020953RPA110090.429Gambusia_affinis
ENSXMAG00000010333RPA18570.233ENSGACG00000010856rpa19470.233Gasterosteus_aculeatus
ENSXMAG00000010333RPA18365.000ENSGAGG00000013611RPA19165.000Gopherus_agassizii
ENSXMAG00000010333RPA18464.172ENSGGOG00000014186RPA19764.172Gorilla_gorilla
ENSXMAG00000010333RPA18072.082ENSHBUG00000017773rpa19372.082Haplochromis_burtoni
ENSXMAG00000010333RPA18072.009ENSHBUG00000009348RPA19372.009Haplochromis_burtoni
ENSXMAG00000010333RPA18865.068ENSHGLG00000008846RPA19165.068Heterocephalus_glaber_female
ENSXMAG00000010333RPA19855.689ENSHGLG00100000799-9955.689Heterocephalus_glaber_male
ENSXMAG00000010333RPA18855.606ENSHGLG00100002005-8955.606Heterocephalus_glaber_male
ENSXMAG00000010333RPA18865.068ENSHGLG00100017755-9165.068Heterocephalus_glaber_male
ENSXMAG00000010333RPA18852.743ENSHCOG00000000351RPA19952.743Hippocampus_comes
ENSXMAG00000010333RPA17966.059ENSHCOG00000001401rpa19266.059Hippocampus_comes
ENSXMAG00000010333RPA18670.481ENSIPUG00000004400rpa19370.481Ictalurus_punctatus
ENSXMAG00000010333RPA18563.087ENSSTOG00000022475RPA19860.081Ictidomys_tridecemlineatus
ENSXMAG00000010333RPA18164.384ENSJJAG00000000876Rpa19464.384Jaculus_jaculus
ENSXMAG00000010333RPA17968.650ENSKMAG00000005605rpa19168.650Kryptolebias_marmoratus
ENSXMAG00000010333RPA19579.226ENSKMAG00000000234RPA110079.226Kryptolebias_marmoratus
ENSXMAG00000010333RPA18668.934ENSLBEG00000021604rpa19668.934Labrus_bergylta
ENSXMAG00000010333RPA19971.915ENSLBEG00000002281RPA19971.955Labrus_bergylta
ENSXMAG00000010333RPA16755.647ENSLACG00000007210RPA19855.647Latimeria_chalumnae
ENSXMAG00000010333RPA18467.720ENSLOCG00000006397rpa19467.720Lepisosteus_oculatus
ENSXMAG00000010333RPA19259.714ENSLAFG00000015354RPA19759.714Loxodonta_africana
ENSXMAG00000010333RPA16364.826ENSMFAG00000036138-8864.286Macaca_fascicularis
ENSXMAG00000010333RPA17963.719ENSMMUG00000011604-9163.719Macaca_mulatta
ENSXMAG00000010333RPA18660.091ENSMMUG00000002442-9160.091Macaca_mulatta
ENSXMAG00000010333RPA17663.265ENSMNEG00000031632-8963.265Macaca_nemestrina
ENSXMAG00000010333RPA17359.819ENSMNEG00000029837-9559.819Macaca_nemestrina
ENSXMAG00000010333RPA17661.224ENSMLEG00000038768-8960.850Mandrillus_leucophaeus
ENSXMAG00000010333RPA19973.267ENSMAMG00000020097RPA19973.126Mastacembelus_armatus
ENSXMAG00000010333RPA18170.023ENSMAMG00000017993rpa19670.023Mastacembelus_armatus
ENSXMAG00000010333RPA18072.082ENSMZEG00005007551rpa19372.082Maylandia_zebra
ENSXMAG00000010333RPA110069.787ENSMZEG00005024731RPA110069.787Maylandia_zebra
ENSXMAG00000010333RPA18958.884ENSMGAG00000005315RPA19658.884Meleagris_gallopavo
ENSXMAG00000010333RPA19160.669ENSMAUG00000010474Rpa19759.432Mesocricetus_auratus
ENSXMAG00000010333RPA18363.953ENSMICG00000012867RPA19663.326Microcebus_murinus
ENSXMAG00000010333RPA18859.915ENSMOCG00000013019Rpa19959.915Microtus_ochrogaster
ENSXMAG00000010333RPA18665.553ENSMMOG00000014292rpa19965.553Mola_mola
ENSXMAG00000010333RPA19278.587ENSMMOG00000010868RPA19878.587Mola_mola
ENSXMAG00000010333RPA18961.715ENSMODG00000010549RPA19951.494Monodelphis_domestica
ENSXMAG00000010333RPA18270.000ENSMALG00000011453rpa19470.000Monopterus_albus
ENSXMAG00000010333RPA19971.548ENSMALG00000001208RPA19971.813Monopterus_albus
ENSXMAG00000010333RPA18463.761MGP_CAROLIEiJ_G0016734Rpa19663.761Mus_caroli
ENSXMAG00000010333RPA18463.761ENSMUSG00000000751Rpa19663.761Mus_musculus
ENSXMAG00000010333RPA19061.088MGP_PahariEiJ_G0017871Rpa19958.614Mus_pahari
ENSXMAG00000010333RPA18463.991MGP_SPRETEiJ_G0017577Rpa18963.991Mus_spretus
ENSXMAG00000010333RPA17963.781ENSMPUG00000013119RPA19163.781Mustela_putorius_furo
ENSXMAG00000010333RPA18563.781ENSMLUG00000006113RPA19163.781Myotis_lucifugus
ENSXMAG00000010333RPA18564.155ENSNGAG00000004522Rpa18564.155Nannospalax_galili
ENSXMAG00000010333RPA19375.789ENSNBRG00000009672RPA19775.789Neolamprologus_brichardi
ENSXMAG00000010333RPA17471.854ENSNBRG00000020595rpa19271.854Neolamprologus_brichardi
ENSXMAG00000010333RPA18963.946ENSNLEG00000017149RPA19663.946Nomascus_leucogenys
ENSXMAG00000010333RPA18360.417ENSMEUG00000006714RPA18760.417Notamacropus_eugenii
ENSXMAG00000010333RPA18664.612ENSODEG00000009038RPA19664.612Octodon_degus
ENSXMAG00000010333RPA18571.625ENSONIG00000013135rpa19171.625Oreochromis_niloticus
ENSXMAG00000010333RPA18564.302ENSOANG00000010880RPA19864.531Ornithorhynchus_anatinus
ENSXMAG00000010333RPA18960.669ENSOCUG00000001504RPA19560.669Oryctolagus_cuniculus
ENSXMAG00000010333RPA18770.852ENSORLG00000004856rpa19470.852Oryzias_latipes
ENSXMAG00000010333RPA19970.857ENSORLG00000003368RPA19970.143Oryzias_latipes
ENSXMAG00000010333RPA18771.076ENSORLG00020008980rpa19471.076Oryzias_latipes_hni
ENSXMAG00000010333RPA19971.307ENSORLG00020015284RPA19970.597Oryzias_latipes_hni
ENSXMAG00000010333RPA18771.076ENSORLG00015013982rpa19471.076Oryzias_latipes_hsok
ENSXMAG00000010333RPA16182.028ENSORLG00015005867-9982.028Oryzias_latipes_hsok
ENSXMAG00000010333RPA19970.000ENSORLG00015020383RPA19969.429Oryzias_latipes_hsok
ENSXMAG00000010333RPA18868.650ENSOMEG00000004704rpa19268.650Oryzias_melastigma
ENSXMAG00000010333RPA19476.907ENSOMEG00000011040RPA19979.355Oryzias_melastigma
ENSXMAG00000010333RPA18962.208ENSOGAG00000005581-9662.208Otolemur_garnettii
ENSXMAG00000010333RPA16766.292ENSOGAG00000029379-9366.292Otolemur_garnettii
ENSXMAG00000010333RPA17963.554ENSOARG00000014479RPA19163.554Ovis_aries
ENSXMAG00000010333RPA18564.172ENSPPAG00000039680RPA19664.172Pan_paniscus
ENSXMAG00000010333RPA18664.206ENSPPRG00000011807RPA19264.206Panthera_pardus
ENSXMAG00000010333RPA18663.982ENSPTIG00000007898RPA19263.982Panthera_tigris_altaica
ENSXMAG00000010333RPA18564.172ENSPTRG00000008539RPA19664.172Pan_troglodytes
ENSXMAG00000010333RPA17963.719ENSPANG00000024592RPA19163.719Papio_anubis
ENSXMAG00000010333RPA17570.762ENSPKIG00000008053rpa18770.762Paramormyrops_kingsleyae
ENSXMAG00000010333RPA18263.864ENSPSIG00000015617RPA19163.864Pelodiscus_sinensis
ENSXMAG00000010333RPA19175.375ENSPMGG00000000543RPA19975.375Periophthalmus_magnuspinnatus
ENSXMAG00000010333RPA18170.759ENSPMGG00000011589rpa19670.759Periophthalmus_magnuspinnatus
ENSXMAG00000010333RPA18463.761ENSPEMG00000021061Rpa19363.761Peromyscus_maniculatus_bairdii
ENSXMAG00000010333RPA18865.227ENSPCIG00000019049RPA19965.227Phascolarctos_cinereus
ENSXMAG00000010333RPA18168.807ENSPFOG00000003987rpa19368.807Poecilia_formosa
ENSXMAG00000010333RPA18068.807ENSPLAG00000004984rpa19368.807Poecilia_latipinna
ENSXMAG00000010333RPA19587.406ENSPLAG00000008844-9787.406Poecilia_latipinna
ENSXMAG00000010333RPA18168.807ENSPMEG00000020602rpa19368.807Poecilia_mexicana
ENSXMAG00000010333RPA19587.406ENSPMEG00000003627-9787.856Poecilia_mexicana
ENSXMAG00000010333RPA18260.952ENSPREG00000010174rpa19160.952Poecilia_reticulata
ENSXMAG00000010333RPA110090.143ENSPREG00000010119RPA110090.429Poecilia_reticulata
ENSXMAG00000010333RPA19259.350ENSPCOG00000001799RPA19859.350Propithecus_coquereli
ENSXMAG00000010333RPA18564.237ENSPVAG00000002149RPA19164.237Pteropus_vampyrus
ENSXMAG00000010333RPA18072.311ENSPNYG00000016316rpa19372.311Pundamilia_nyererei
ENSXMAG00000010333RPA110069.929ENSPNYG00000024165RPA110069.929Pundamilia_nyererei
ENSXMAG00000010333RPA18259.179ENSPNAG00000008599rpa19658.071Pygocentrus_nattereri
ENSXMAG00000010333RPA18760.680ENSRNOG00000003123Rpa19960.251Rattus_norvegicus
ENSXMAG00000010333RPA18663.492ENSRBIG00000036587RPA19163.492Rhinopithecus_bieti
ENSXMAG00000010333RPA18658.957ENSRROG00000043278RPA19058.957Rhinopithecus_roxellana
ENSXMAG00000010333RPA16535.106YAR007CRFA17535.106Saccharomyces_cerevisiae
ENSXMAG00000010333RPA18463.758ENSSBOG00000030233RPA19763.758Saimiri_boliviensis_boliviensis
ENSXMAG00000010333RPA19162.343ENSSHAG00000007969RPA19553.010Sarcophilus_harrisii
ENSXMAG00000010333RPA18671.493ENSSFOG00015005362rpa18771.493Scleropages_formosus
ENSXMAG00000010333RPA19970.198ENSSMAG00000019746RPA19970.538Scophthalmus_maximus
ENSXMAG00000010333RPA18270.880ENSSDUG00000011949rpa19570.880Seriola_dumerili
ENSXMAG00000010333RPA19973.343ENSSDUG00000016358RPA19973.766Seriola_dumerili
ENSXMAG00000010333RPA18270.429ENSSLDG00000011806rpa19470.429Seriola_lalandi_dorsalis
ENSXMAG00000010333RPA19973.484ENSSLDG00000020784RPA19973.625Seriola_lalandi_dorsalis
ENSXMAG00000010333RPA16858.309ENSSARG00000007506RPA17358.309Sorex_araneus
ENSXMAG00000010333RPA18162.156ENSSPUG00000007223RPA18962.156Sphenodon_punctatus
ENSXMAG00000010333RPA18270.455ENSSPAG00000009903rpa19470.455Stegastes_partitus
ENSXMAG00000010333RPA19283.843ENSSPAG00000011165RPA19983.843Stegastes_partitus
ENSXMAG00000010333RPA18463.170ENSSSCG00000017822RPA19863.170Sus_scrofa
ENSXMAG00000010333RPA19162.138ENSTGUG00000005775RPA19362.138Taeniopygia_guttata
ENSXMAG00000010333RPA18870.682ENSTRUG00000003616rpa19370.843Takifugu_rubripes
ENSXMAG00000010333RPA19966.759ENSTRUG00000000405RPA19967.321Takifugu_rubripes
ENSXMAG00000010333RPA19069.615ENSTNIG00000016199rpa19269.841Tetraodon_nigroviridis
ENSXMAG00000010333RPA16264.920ENSTBEG00000002709RPA17364.920Tupaia_belangeri
ENSXMAG00000010333RPA18063.098ENSTTRG00000001169RPA19263.098Tursiops_truncatus
ENSXMAG00000010333RPA17267.308ENSUAMG00000015676RPA19167.308Ursus_americanus
ENSXMAG00000010333RPA18363.492ENSUMAG00000009328RPA19663.492Ursus_maritimus
ENSXMAG00000010333RPA19257.778ENSVPAG00000009443RPA19857.778Vicugna_pacos
ENSXMAG00000010333RPA18963.265ENSVVUG00000021715RPA19163.492Vulpes_vulpes
ENSXMAG00000010333RPA17866.667ENSXETG00000013538rpa19166.667Xenopus_tropicalis
ENSXMAG00000010333RPA18069.059ENSXCOG00000010068rpa18869.059Xiphophorus_couchianus
ENSXMAG00000010333RPA19399.182ENSXCOG00000009899-10099.182Xiphophorus_couchianus
ENSXMAG00000010333RPA18168.807ENSXMAG00000004102rpa19368.807Xiphophorus_maculatus

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