EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000010356 (Gene tree)
Gene ID: 102221515
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 15146 bases
Position: chr15:20214535-20229680
Accession: 102221515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025819	SAP	PF02037.27	2.8e-11	1	1
ENSXMAP00000010398	SAP	PF02037.27	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000024755	-	6947	-	ENSXMAP00000025819	805 (aa)	-	-
ENSXMAT00000010412	-	6117	XM_023347573	ENSXMAP00000010398	817 (aa)	XP_023203341	M4A7F4

Gene Model

Click here to download ENSXMAG00000010356's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000010356	hnrnpub	97	78.261	ENSG00000153187	HNRNPU	99	63.333	Homo_sapiens
ENSXMAG00000010356	hnrnpub	100	82.217	ENSAPOG00000017400	hnrnpub	100	81.441	Acanthochromis_polyacanthus
ENSXMAG00000010356	hnrnpub	86	78.261	ENSAMEG00000009145	HNRNPU	77	78.261	Ailuropoda_melanoleuca
ENSXMAG00000010356	hnrnpub	98	75.735	ENSACIG00000012138	hnrnpub	96	82.190	Amphilophus_citrinellus
ENSXMAG00000010356	hnrnpub	100	84.044	ENSAOCG00000015843	hnrnpub	100	82.418	Amphiprion_ocellaris
ENSXMAG00000010356	hnrnpub	100	84.044	ENSAPEG00000014679	hnrnpub	100	82.418	Amphiprion_percula
ENSXMAG00000010356	hnrnpub	98	82.921	ENSATEG00000016178	hnrnpub	97	83.727	Anabas_testudineus
ENSXMAG00000010356	hnrnpub	88	61.111	ENSACAG00000004511	HNRNPU	79	57.627	Anolis_carolinensis
ENSXMAG00000010356	hnrnpub	80	55.793	ENSANAG00000033895	-	76	54.038	Aotus_nancymaae
ENSXMAG00000010356	hnrnpub	100	83.537	ENSACLG00000008165	hnrnpub	100	83.049	Astatotilapia_calliptera
ENSXMAG00000010356	hnrnpub	86	78.261	ENSBTAG00000007606	HNRNPU	99	46.504	Bos_taurus
ENSXMAG00000010356	hnrnpub	97	78.261	ENSCJAG00000016914	HNRNPU	99	46.282	Callithrix_jacchus
ENSXMAG00000010356	hnrnpub	80	55.793	ENSCAFG00020000918	HNRNPU	75	54.038	Canis_lupus_dingo
ENSXMAG00000010356	hnrnpub	80	56.098	ENSCHIG00000004900	HNRNPU	75	54.185	Capra_hircus
ENSXMAG00000010356	hnrnpub	96	80.435	ENSCPOG00000011887	HNRNPU	83	51.674	Cavia_porcellus
ENSXMAG00000010356	hnrnpub	97	78.261	ENSCCAG00000037859	-	99	46.282	Cebus_capucinus
ENSXMAG00000010356	hnrnpub	99	59.211	ENSCATG00000035273	HNRNPU	92	78.261	Cercocebus_atys
ENSXMAG00000010356	hnrnpub	86	80.435	ENSCLAG00000007100	HNRNPU	62	80.435	Chinchilla_lanigera
ENSXMAG00000010356	hnrnpub	80	55.793	ENSCSAG00000009219	HNRNPU	75	54.038	Chlorocebus_sabaeus
ENSXMAG00000010356	hnrnpub	86	78.261	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSXMAG00000010356	hnrnpub	89	59.068	ENSCPBG00000009415	HNRNPU	98	48.984	Chrysemys_picta_bellii
ENSXMAG00000010356	hnrnpub	89	59.211	ENSCANG00000022780	HNRNPU	77	78.261	Colobus_angolensis_palliatus
ENSXMAG00000010356	hnrnpub	89	58.667	ENSCGRG00001020525	Hnrnpu	77	83.721	Cricetulus_griseus_chok1gshd
ENSXMAG00000010356	hnrnpub	100	76.066	ENSCSEG00000010804	hnrnpub	100	77.370	Cynoglossus_semilaevis
ENSXMAG00000010356	hnrnpub	97	74.629	ENSCVAG00000004280	hnrnpub	100	79.739	Cyprinodon_variegatus
ENSXMAG00000010356	hnrnpub	100	60.049	ENSDARG00000015206	hnrnpua	100	55.461	Danio_rerio
ENSXMAG00000010356	hnrnpub	100	59.521	ENSDARG00000004735	hnrnpub	100	57.688	Danio_rerio
ENSXMAG00000010356	hnrnpub	86	78.261	ENSDNOG00000000215	HNRNPU	69	78.261	Dasypus_novemcinctus
ENSXMAG00000010356	hnrnpub	80	56.098	ENSDORG00000015491	Hnrnpu	74	55.167	Dipodomys_ordii
ENSXMAG00000010356	hnrnpub	94	55.488	ENSETEG00000014565	HNRNPU	78	78.261	Echinops_telfairi
ENSXMAG00000010356	hnrnpub	81	55.772	ENSEASG00005003017	HNRNPU	75	54.332	Equus_asinus_asinus
ENSXMAG00000010356	hnrnpub	81	55.622	ENSECAG00000007955	HNRNPU	75	54.185	Equus_caballus
ENSXMAG00000010356	hnrnpub	100	69.708	ENSELUG00000010733	hnrnpub	100	69.438	Esox_lucius
ENSXMAG00000010356	hnrnpub	100	54.100	ENSELUG00000011966	hnrnpua	92	66.197	Esox_lucius
ENSXMAG00000010356	hnrnpub	80	56.012	ENSFCAG00000002156	HNRNPU	74	54.332	Felis_catus
ENSXMAG00000010356	hnrnpub	91	80.435	ENSFDAG00000006026	HNRNPU	99	80.435	Fukomys_damarensis
ENSXMAG00000010356	hnrnpub	100	89.734	ENSFHEG00000022639	hnrnpub	100	85.369	Fundulus_heteroclitus
ENSXMAG00000010356	hnrnpub	100	70.602	ENSGMOG00000001755	hnrnpub	80	76.752	Gadus_morhua
ENSXMAG00000010356	hnrnpub	73	72.222	ENSGALG00000010671	HNRNPU	78	72.222	Gallus_gallus
ENSXMAG00000010356	hnrnpub	100	96.999	ENSGAFG00000009369	hnrnpub	100	96.999	Gambusia_affinis
ENSXMAG00000010356	hnrnpub	100	71.347	ENSGACG00000004679	hnrnpub	99	70.748	Gasterosteus_aculeatus
ENSXMAG00000010356	hnrnpub	86	78.261	ENSGGOG00000004061	HNRNPU	99	46.274	Gorilla_gorilla
ENSXMAG00000010356	hnrnpub	100	83.659	ENSHBUG00000012290	hnrnpub	100	83.171	Haplochromis_burtoni
ENSXMAG00000010356	hnrnpub	86	80.435	ENSHGLG00000010594	-	60	80.435	Heterocephalus_glaber_female
ENSXMAG00000010356	hnrnpub	90	80.435	ENSHGLG00100015093	HNRNPU	78	80.435	Heterocephalus_glaber_male
ENSXMAG00000010356	hnrnpub	100	70.749	ENSHCOG00000020091	hnrnpub	83	75.143	Hippocampus_comes
ENSXMAG00000010356	hnrnpub	78	91.489	ENSIPUG00000007749	hnrnpu	80	83.636	Ictalurus_punctatus
ENSXMAG00000010356	hnrnpub	85	83.721	ENSJJAG00000011371	Hnrnpu	81	63.492	Jaculus_jaculus
ENSXMAG00000010356	hnrnpub	100	82.688	ENSKMAG00000004532	hnrnpub	100	81.675	Kryptolebias_marmoratus
ENSXMAG00000010356	hnrnpub	85	85.591	ENSLBEG00000022520	hnrnpub	100	80.872	Labrus_bergylta
ENSXMAG00000010356	hnrnpub	99	45.995	ENSLACG00000017463	HNRNPU	79	70.909	Latimeria_chalumnae
ENSXMAG00000010356	hnrnpub	92	68.202	ENSLOCG00000016652	hnrnpua	83	65.616	Lepisosteus_oculatus
ENSXMAG00000010356	hnrnpub	99	50.058	ENSLAFG00000021377	HNRNPU	79	78.261	Loxodonta_africana
ENSXMAG00000010356	hnrnpub	99	59.211	ENSMFAG00000037308	HNRNPU	92	78.261	Macaca_fascicularis
ENSXMAG00000010356	hnrnpub	80	55.793	ENSMMUG00000021098	HNRNPU	76	54.038	Macaca_mulatta
ENSXMAG00000010356	hnrnpub	99	59.211	ENSMNEG00000043645	HNRNPU	92	78.261	Macaca_nemestrina
ENSXMAG00000010356	hnrnpub	100	84.756	ENSMAMG00000007196	hnrnpub	100	84.268	Mastacembelus_armatus
ENSXMAG00000010356	hnrnpub	100	83.537	ENSMZEG00005003185	hnrnpub	100	83.049	Maylandia_zebra
ENSXMAG00000010356	hnrnpub	82	55.655	ENSMAUG00000008842	Hnrnpu	79	83.721	Mesocricetus_auratus
ENSXMAG00000010356	hnrnpub	94	55.945	ENSMICG00000004616	HNRNPU	92	78.261	Microcebus_murinus
ENSXMAG00000010356	hnrnpub	91	57.143	ENSMOCG00000015623	Hnrnpu	62	83.721	Microtus_ochrogaster
ENSXMAG00000010356	hnrnpub	86	78.261	ENSMODG00000006515	HNRNPU	78	78.261	Monodelphis_domestica
ENSXMAG00000010356	hnrnpub	96	83.122	ENSMALG00000018243	hnrnpub	99	82.107	Monopterus_albus
ENSXMAG00000010356	hnrnpub	80	56.402	MGP_CAROLIEiJ_G0014962	Hnrnpu	76	53.382	Mus_caroli
ENSXMAG00000010356	hnrnpub	80	56.250	ENSMUSG00000039630	Hnrnpu	76	53.382	Mus_musculus
ENSXMAG00000010356	hnrnpub	80	55.690	MGP_PahariEiJ_G0028193	Hnrnpu	76	53.235	Mus_pahari
ENSXMAG00000010356	hnrnpub	80	56.250	MGP_SPRETEiJ_G0015761	Hnrnpu	76	53.382	Mus_spretus
ENSXMAG00000010356	hnrnpub	87	76.087	ENSMLUG00000000475	HNRNPU	63	76.087	Myotis_lucifugus
ENSXMAG00000010356	hnrnpub	99	49.770	ENSNGAG00000019075	Hnrnpu	76	53.744	Nannospalax_galili
ENSXMAG00000010356	hnrnpub	100	83.415	ENSNBRG00000017855	hnrnpub	100	82.927	Neolamprologus_brichardi
ENSXMAG00000010356	hnrnpub	79	78.261	ENSMEUG00000000541	HNRNPU	62	78.261	Notamacropus_eugenii
ENSXMAG00000010356	hnrnpub	100	79.487	ENSONIG00000001260	hnrnpub	100	79.487	Oreochromis_niloticus
ENSXMAG00000010356	hnrnpub	81	78.261	ENSOCUG00000014469	HNRNPU	59	78.261	Oryctolagus_cuniculus
ENSXMAG00000010356	hnrnpub	100	80.952	ENSORLG00000016114	hnrnpub	100	81.074	Oryzias_latipes
ENSXMAG00000010356	hnrnpub	100	80.464	ENSORLG00020005363	hnrnpub	100	81.319	Oryzias_latipes_hni
ENSXMAG00000010356	hnrnpub	100	81.197	ENSORLG00015001190	hnrnpub	100	81.197	Oryzias_latipes_hsok
ENSXMAG00000010356	hnrnpub	100	81.685	ENSOMEG00000014951	hnrnpub	100	81.563	Oryzias_melastigma
ENSXMAG00000010356	hnrnpub	99	48.861	ENSOGAG00000014024	HNRNPU	75	53.891	Otolemur_garnettii
ENSXMAG00000010356	hnrnpub	88	63.077	ENSOARG00000004985	HNRNPU	89	63.077	Ovis_aries
ENSXMAG00000010356	hnrnpub	97	78.261	ENSPPAG00000038652	HNRNPU	99	46.282	Pan_paniscus
ENSXMAG00000010356	hnrnpub	88	78.261	ENSPPRG00000002662	HNRNPU	78	78.261	Panthera_pardus
ENSXMAG00000010356	hnrnpub	97	78.261	ENSPTRG00000002182	HNRNPU	99	46.282	Pan_troglodytes
ENSXMAG00000010356	hnrnpub	86	53.899	ENSPANG00000011643	HNRNPU	76	54.038	Papio_anubis
ENSXMAG00000010356	hnrnpub	100	63.971	ENSPKIG00000006885	hnrnpua	100	62.963	Paramormyrops_kingsleyae
ENSXMAG00000010356	hnrnpub	100	63.475	ENSPKIG00000022332	hnrnpub	79	66.455	Paramormyrops_kingsleyae
ENSXMAG00000010356	hnrnpub	86	78.261	ENSPCIG00000008657	HNRNPU	77	78.261	Phascolarctos_cinereus
ENSXMAG00000010356	hnrnpub	100	98.776	ENSPFOG00000002908	hnrnpub	100	98.776	Poecilia_formosa
ENSXMAG00000010356	hnrnpub	100	98.654	ENSPLAG00000004160	hnrnpub	100	98.654	Poecilia_latipinna
ENSXMAG00000010356	hnrnpub	94	56.098	ENSPCOG00000018655	-	92	78.261	Propithecus_coquereli
ENSXMAG00000010356	hnrnpub	80	54.128	ENSPCOG00000003883	-	59	63.597	Propithecus_coquereli
ENSXMAG00000010356	hnrnpub	97	78.261	ENSPVAG00000002581	HNRNPU	99	46.615	Pteropus_vampyrus
ENSXMAG00000010356	hnrnpub	100	83.659	ENSPNYG00000021642	hnrnpub	100	83.171	Pundamilia_nyererei
ENSXMAG00000010356	hnrnpub	100	64.508	ENSPNAG00000001055	hnrnpub	100	62.724	Pygocentrus_nattereri
ENSXMAG00000010356	hnrnpub	80	56.317	ENSRNOG00000033790	Hnrnpu	75	53.698	Rattus_norvegicus
ENSXMAG00000010356	hnrnpub	86	53.352	ENSRBIG00000031519	HNRNPU	76	53.451	Rhinopithecus_bieti
ENSXMAG00000010356	hnrnpub	86	54.212	ENSRROG00000041642	HNRNPU	75	54.038	Rhinopithecus_roxellana
ENSXMAG00000010356	hnrnpub	100	63.669	ENSSFOG00015019004	hnrnpu	98	63.802	Scleropages_formosus
ENSXMAG00000010356	hnrnpub	100	64.573	ENSSFOG00015001124	hnrnpub	82	68.254	Scleropages_formosus
ENSXMAG00000010356	hnrnpub	85	84.582	ENSSMAG00000003607	hnrnpub	100	77.594	Scophthalmus_maximus
ENSXMAG00000010356	hnrnpub	100	82.909	ENSSDUG00000005912	hnrnpub	100	83.758	Seriola_dumerili
ENSXMAG00000010356	hnrnpub	100	82.126	ENSSLDG00000004899	hnrnpub	100	83.213	Seriola_lalandi_dorsalis
ENSXMAG00000010356	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	80	74.000	Sphenodon_punctatus
ENSXMAG00000010356	hnrnpub	100	82.662	ENSSPAG00000011853	hnrnpub	100	82.784	Stegastes_partitus
ENSXMAG00000010356	hnrnpub	89	59.459	ENSSSCG00000010877	HNRNPU	99	46.726	Sus_scrofa
ENSXMAG00000010356	hnrnpub	100	75.718	ENSTRUG00000007759	hnrnpub	100	74.371	Takifugu_rubripes
ENSXMAG00000010356	hnrnpub	86	78.261	ENSUAMG00000021120	HNRNPU	79	78.261	Ursus_americanus
ENSXMAG00000010356	hnrnpub	86	70.213	ENSUMAG00000012322	HNRNPU	81	70.213	Ursus_maritimus
ENSXMAG00000010356	hnrnpub	79	78.261	ENSVPAG00000010520	HNRNPU	82	78.261	Vicugna_pacos
ENSXMAG00000010356	hnrnpub	80	55.793	ENSVVUG00000026524	HNRNPU	72	64.468	Vulpes_vulpes
ENSXMAG00000010356	hnrnpub	99	48.169	ENSXETG00000011386	hnrnpu	59	61.966	Xenopus_tropicalis