EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000010507 (Gene tree)
Gene ID
102237828
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
9805 bases
Position
chr6:30031355-30041159
Accession
102237828
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000010526RRM_1PF00076.222e-4112
ENSXMAP00000010526RRM_1PF00076.222e-4122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000010540-1485XM_023334910ENSXMAP00000010526494 (aa)XP_023190678M4A7T2
Gene Model
Click here to download ENSXMAG00000010507's gene model file
Pathways
Pathway IDPathway NameSource
xma03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010507's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000010507-9979.528ENSG00000179950PUF6010081.038Homo_sapiens
ENSXMAG00000010507-9981.584ENSAPOG00000001713puf60b9981.782Acanthochromis_polyacanthus
ENSXMAG00000010507-9975.191ENSAMEG00000006406PUF609475.954Ailuropoda_melanoleuca
ENSXMAG00000010507-9879.029ENSACIG00000021705puf60b10079.029Amphilophus_citrinellus
ENSXMAG00000010507-9879.192ENSACIG00000003263-10079.798Amphilophus_citrinellus
ENSXMAG00000010507-9985.853ENSAOCG00000015558-9986.047Amphiprion_ocellaris
ENSXMAG00000010507-9981.548ENSAOCG00000005395puf60b9981.746Amphiprion_ocellaris
ENSXMAG00000010507-9979.406ENSAPEG00000011923puf60b9979.604Amphiprion_percula
ENSXMAG00000010507-9881.429ENSAPEG00000001836-10080.952Amphiprion_percula
ENSXMAG00000010507-9986.267ENSATEG00000006303-9986.267Anabas_testudineus
ENSXMAG00000010507-9979.119ENSATEG00000001730puf60b9979.119Anabas_testudineus
ENSXMAG00000010507-9878.185ENSAPLG00000010150PUF6010078.095Anas_platyrhynchos
ENSXMAG00000010507-9877.543ENSACAG00000001645PUF609677.543Anolis_carolinensis
ENSXMAG00000010507-9880.439ENSANAG00000018626PUF6010078.571Aotus_nancymaae
ENSXMAG00000010507-9881.727ENSACLG00000004462puf60b10081.727Astatotilapia_calliptera
ENSXMAG00000010507-9874.219ENSAMXG00000041030puf60b10075.391Astyanax_mexicanus
ENSXMAG00000010507-9981.980ENSAMXG00000036570puf60a9882.970Astyanax_mexicanus
ENSXMAG00000010507-9979.724ENSBTAG00000037493PUF6010077.609Bos_taurus
ENSXMAG00000010507-8250.859WBGene00004389rnp-69050.000Caenorhabditis_elegans
ENSXMAG00000010507-9979.528ENSCJAG00000021485PUF609778.378Callithrix_jacchus
ENSXMAG00000010507-9979.724ENSCAFG00000001400PUF609380.512Canis_familiaris
ENSXMAG00000010507-9979.724ENSCAFG00020018754PUF609877.863Canis_lupus_dingo
ENSXMAG00000010507-9977.143ENSCHIG00000001618PUF608777.905Capra_hircus
ENSXMAG00000010507-9978.185ENSTSYG00000011912PUF6010078.571Carlito_syrichta
ENSXMAG00000010507-9974.805ENSCPOG00000014613PUF609475.586Cavia_porcellus
ENSXMAG00000010507-9980.118ENSCCAG00000007744PUF609778.378Cebus_capucinus
ENSXMAG00000010507-9979.528ENSCATG00000035405PUF609877.672Cercocebus_atys
ENSXMAG00000010507-9979.724ENSCLAG00000009154PUF609380.512Chinchilla_lanigera
ENSXMAG00000010507-9877.606ENSCSAG00000008878PUF6010078.378Chlorocebus_sabaeus
ENSXMAG00000010507-9877.992ENSCPBG00000005595PUF609877.481Chrysemys_picta_bellii
ENSXMAG00000010507-6161.321ENSCING00000002156-8761.635Ciona_intestinalis
ENSXMAG00000010507-9850.000ENSCING00000008436-9550.000Ciona_intestinalis
ENSXMAG00000010507-9552.510ENSCSAVG00000001385-9954.118Ciona_savignyi
ENSXMAG00000010507-9650.734ENSCSAVG00000004765-9850.728Ciona_savignyi
ENSXMAG00000010507-7979.218ENSCANG00000041843PUF6010077.804Colobus_angolensis_palliatus
ENSXMAG00000010507-9979.528ENSCGRG00001017442Puf609380.315Cricetulus_griseus_chok1gshd
ENSXMAG00000010507-9976.952ENSCGRG00000003717Puf609377.714Cricetulus_griseus_crigri
ENSXMAG00000010507-9981.038ENSCSEG00000014845-9082.236Cynoglossus_semilaevis
ENSXMAG00000010507-10077.841ENSCSEG00000019887puf60b9378.137Cynoglossus_semilaevis
ENSXMAG00000010507-9088.043ENSCVAG00000001560-9291.475Cyprinodon_variegatus
ENSXMAG00000010507-9880.723ENSCVAG00000009386puf60b10080.924Cyprinodon_variegatus
ENSXMAG00000010507-9875.639ENSDARG00000001241puf60b10088.095Danio_rerio
ENSXMAG00000010507-9878.585ENSDARG00000032175puf60a10081.092Danio_rerio
ENSXMAG00000010507-9962.547ENSDNOG00000043278PUF609562.547Dasypus_novemcinctus
ENSXMAG00000010507-9979.528ENSDORG00000004585Puf609580.315Dipodomys_ordii
ENSXMAG00000010507-8663.028FBgn0028577hfp7760.526Drosophila_melanogaster
ENSXMAG00000010507-9570.588ENSEBUG00000005470-8869.895Eptatretus_burgeri
ENSXMAG00000010507-9862.148ENSEBUG00000014291puf60b8463.796Eptatretus_burgeri
ENSXMAG00000010507-9979.724ENSEASG00005009695PUF609877.863Equus_asinus_asinus
ENSXMAG00000010507-9979.724ENSECAG00000024681PUF609778.161Equus_caballus
ENSXMAG00000010507-9884.661ENSELUG00000018443-10084.861Esox_lucius
ENSXMAG00000010507-9976.894ENSELUG00000006507puf60b9976.262Esox_lucius
ENSXMAG00000010507-9979.724ENSFCAG00000001045PUF6010078.571Felis_catus
ENSXMAG00000010507-9968.501ENSFALG00000001136PUF609969.260Ficedula_albicollis
ENSXMAG00000010507-9979.921ENSFDAG00000017177PUF609380.709Fukomys_damarensis
ENSXMAG00000010507-9387.629ENSFHEG00000021687PUF6010088.655Fundulus_heteroclitus
ENSXMAG00000010507-9881.526ENSFHEG00000020046puf60b10081.727Fundulus_heteroclitus
ENSXMAG00000010507-9967.188ENSGMOG00000006392puf60b10066.341Gadus_morhua
ENSXMAG00000010507-6580.580ENSGALG00000039901PUF609480.580Gallus_gallus
ENSXMAG00000010507-9978.311ENSGAFG00000021040puf60b10079.029Gambusia_affinis
ENSXMAG00000010507-9896.281ENSGAFG00000004334-10096.281Gambusia_affinis
ENSXMAG00000010507-9972.427ENSGACG00000001484-9974.239Gasterosteus_aculeatus
ENSXMAG00000010507-9967.754ENSGACG00000004717puf60b9867.754Gasterosteus_aculeatus
ENSXMAG00000010507-9880.639ENSGAGG00000013289PUF609280.079Gopherus_agassizii
ENSXMAG00000010507-9979.528ENSGGOG00000004646PUF609877.672Gorilla_gorilla
ENSXMAG00000010507-9881.727ENSHBUG00000015118puf60b10081.727Haplochromis_burtoni
ENSXMAG00000010507-9886.842ENSHBUG00000009634-10087.247Haplochromis_burtoni
ENSXMAG00000010507-9979.921ENSHGLG00000006111PUF609380.709Heterocephalus_glaber_female
ENSXMAG00000010507-9979.921ENSHGLG00100012362PUF609380.709Heterocephalus_glaber_male
ENSXMAG00000010507-9876.686ENSHCOG00000015541puf60b10078.035Hippocampus_comes
ENSXMAG00000010507-9671.079ENSHCOG00000000378-9969.922Hippocampus_comes
ENSXMAG00000010507-9980.952ENSIPUG00000002453puf60a9981.746Ictalurus_punctatus
ENSXMAG00000010507-9875.740ENSIPUG00000004660puf60b10075.740Ictalurus_punctatus
ENSXMAG00000010507-9977.143ENSSTOG00000025037PUF609477.905Ictidomys_tridecemlineatus
ENSXMAG00000010507-9979.528ENSJJAG00000001076Puf609380.315Jaculus_jaculus
ENSXMAG00000010507-9879.029ENSKMAG00000016745puf60b10079.223Kryptolebias_marmoratus
ENSXMAG00000010507-9881.766ENSKMAG00000010106-10082.726Kryptolebias_marmoratus
ENSXMAG00000010507-9977.922ENSLBEG00000012505puf60b10077.922Labrus_bergylta
ENSXMAG00000010507-7076.776ENSLACG00000005456PUF6010076.776Latimeria_chalumnae
ENSXMAG00000010507-9981.226ENSLOCG00000010106puf60b9981.034Lepisosteus_oculatus
ENSXMAG00000010507-9976.000ENSLAFG00000022929PUF609476.762Loxodonta_africana
ENSXMAG00000010507-9979.528ENSMFAG00000043373PUF609977.672Macaca_fascicularis
ENSXMAG00000010507-9979.528ENSMMUG00000013558PUF609877.672Macaca_mulatta
ENSXMAG00000010507-9979.528ENSMNEG00000031099PUF609877.672Macaca_nemestrina
ENSXMAG00000010507-9880.240ENSMLEG00000040009PUF6010081.038Mandrillus_leucophaeus
ENSXMAG00000010507-9986.486ENSMAMG00000019476-9986.486Mastacembelus_armatus
ENSXMAG00000010507-9978.764ENSMAMG00000010394puf60b9978.764Mastacembelus_armatus
ENSXMAG00000010507-9984.008ENSMZEG00005019425-9984.393Maylandia_zebra
ENSXMAG00000010507-9881.727ENSMZEG00005018515puf60b10081.727Maylandia_zebra
ENSXMAG00000010507-9878.185ENSMGAG00000013070PUF609581.214Meleagris_gallopavo
ENSXMAG00000010507-9365.768ENSMAUG00000018549-9566.598Mesocricetus_auratus
ENSXMAG00000010507-6982.955ENSMAUG00000014267-9082.386Mesocricetus_auratus
ENSXMAG00000010507-9977.143ENSMICG00000012226PUF609977.567Microcebus_murinus
ENSXMAG00000010507-9979.528ENSMOCG00000018780Puf609380.315Microtus_ochrogaster
ENSXMAG00000010507-10080.808ENSMMOG00000018059-9983.726Mola_mola
ENSXMAG00000010507-9879.417ENSMMOG00000004217puf60b10079.417Mola_mola
ENSXMAG00000010507-9979.724ENSMODG00000009161PUF609480.512Monodelphis_domestica
ENSXMAG00000010507-9985.549ENSMALG00000000200-9985.356Monopterus_albus
ENSXMAG00000010507-9971.785ENSMALG00000006797puf60b9971.648Monopterus_albus
ENSXMAG00000010507-9979.724MGP_CAROLIEiJ_G0019910Puf609380.512Mus_caroli
ENSXMAG00000010507-9979.724ENSMUSG00000002524Puf609380.512Mus_musculus
ENSXMAG00000010507-9979.724MGP_PahariEiJ_G0019920Puf609380.512Mus_pahari
ENSXMAG00000010507-9979.724MGP_SPRETEiJ_G0020812Puf609380.512Mus_spretus
ENSXMAG00000010507-9976.952ENSMPUG00000008137PUF609377.714Mustela_putorius_furo
ENSXMAG00000010507-9976.529ENSMLUG00000013032-9877.515Myotis_lucifugus
ENSXMAG00000010507-9976.381ENSMLUG00000000238-9477.143Myotis_lucifugus
ENSXMAG00000010507-9979.528ENSNGAG00000000712Puf6010078.378Nannospalax_galili
ENSXMAG00000010507-7877.327ENSNBRG00000013047puf60b9777.327Neolamprologus_brichardi
ENSXMAG00000010507-9984.272ENSNBRG00000017223-9984.556Neolamprologus_brichardi
ENSXMAG00000010507-9979.528ENSNLEG00000002156PUF609880.276Nomascus_leucogenys
ENSXMAG00000010507-7184.532ENSOPRG00000002147PUF607584.746Ochotona_princeps
ENSXMAG00000010507-9557.460ENSODEG00000015513-9557.344Octodon_degus
ENSXMAG00000010507-7284.337ENSODEG00000014024-9084.337Octodon_degus
ENSXMAG00000010507-9978.626ENSONIG00000006247puf60b9978.626Oreochromis_niloticus
ENSXMAG00000010507-9984.363ENSONIG00000014030-9985.135Oreochromis_niloticus
ENSXMAG00000010507-9763.636ENSOANG00000006962PUF609964.229Ornithorhynchus_anatinus
ENSXMAG00000010507-9883.852ENSORLG00000028655-9984.241Oryzias_latipes
ENSXMAG00000010507-9981.151ENSORLG00000012279puf60b9981.349Oryzias_latipes
ENSXMAG00000010507-9978.503ENSORLG00020007333puf6010079.029Oryzias_latipes_hni
ENSXMAG00000010507-9984.333ENSORLG00020018144-9984.720Oryzias_latipes_hni
ENSXMAG00000010507-9984.436ENSORLG00015016833-9588.506Oryzias_latipes_hsok
ENSXMAG00000010507-9977.820ENSORLG00015007718puf60b10078.917Oryzias_latipes_hsok
ENSXMAG00000010507-9879.394ENSOMEG00000001643puf60b10079.798Oryzias_melastigma
ENSXMAG00000010507-9988.353ENSOMEG00000022185-9689.157Oryzias_melastigma
ENSXMAG00000010507-9977.143ENSOGAG00000006259PUF609477.905Otolemur_garnettii
ENSXMAG00000010507-9975.242ENSOARG00000016235PUF609977.413Ovis_aries
ENSXMAG00000010507-9979.528ENSPPAG00000029933PUF609977.419Pan_paniscus
ENSXMAG00000010507-9880.439ENSPPRG00000003257PUF6010081.238Panthera_pardus
ENSXMAG00000010507-9979.568ENSPTIG00000009795PUF609878.405Panthera_tigris_altaica
ENSXMAG00000010507-9979.528ENSPTRG00000020670PUF609977.419Pan_troglodytes
ENSXMAG00000010507-9979.528ENSPTRG00000043963-9877.672Pan_troglodytes
ENSXMAG00000010507-9979.528ENSPANG00000021936PUF609877.672Papio_anubis
ENSXMAG00000010507-9982.704ENSPKIG00000012204puf60b9983.101Paramormyrops_kingsleyae
ENSXMAG00000010507-9984.086ENSPKIG00000004295puf60a10085.503Paramormyrops_kingsleyae
ENSXMAG00000010507-9977.143ENSPSIG00000004679PUF609977.567Pelodiscus_sinensis
ENSXMAG00000010507-9878.529ENSPMGG00000013444puf60b10078.529Periophthalmus_magnuspinnatus
ENSXMAG00000010507-9979.528ENSPEMG00000008820Puf609380.315Peromyscus_maniculatus_bairdii
ENSXMAG00000010507-9979.764ENSPCIG00000020270PUF609878.571Phascolarctos_cinereus
ENSXMAG00000010507-9993.750ENSPFOG00000011118-9993.750Poecilia_formosa
ENSXMAG00000010507-9981.188ENSPFOG00000019217puf60b9981.386Poecilia_formosa
ENSXMAG00000010507-9881.526ENSPLAG00000010754puf60b10081.727Poecilia_latipinna
ENSXMAG00000010507-9993.555ENSPLAG00000017025-9293.555Poecilia_latipinna
ENSXMAG00000010507-9881.526ENSPMEG00000000838puf60b10081.727Poecilia_mexicana
ENSXMAG00000010507-9994.141ENSPMEG00000009767-9294.141Poecilia_mexicana
ENSXMAG00000010507-9879.920ENSPREG00000005440puf60b10080.120Poecilia_reticulata
ENSXMAG00000010507-7875.359ENSPPYG00000018951-9576.316Pongo_abelii
ENSXMAG00000010507-7876.850ENSPCAG00000014837PUF6010077.804Procavia_capensis
ENSXMAG00000010507-9979.528ENSPCOG00000027981PUF609977.376Propithecus_coquereli
ENSXMAG00000010507-9880.625ENSPVAG00000016167PUF608178.750Pteropus_vampyrus
ENSXMAG00000010507-9879.029ENSPNYG00000002556puf60b10079.029Pundamilia_nyererei
ENSXMAG00000010507-9984.008ENSPNYG00000004273-9984.393Pundamilia_nyererei
ENSXMAG00000010507-9882.470ENSPNAG00000019909puf60a9983.466Pygocentrus_nattereri
ENSXMAG00000010507-9976.786ENSPNAG00000019415puf60b9176.634Pygocentrus_nattereri
ENSXMAG00000010507-9979.724ENSRNOG00000009960Puf609380.512Rattus_norvegicus
ENSXMAG00000010507-9979.528ENSRBIG00000035274PUF609877.672Rhinopithecus_bieti
ENSXMAG00000010507-9979.528ENSRROG00000029360PUF609977.672Rhinopithecus_roxellana
ENSXMAG00000010507-10077.539ENSSBOG00000027089PUF609878.320Saimiri_boliviensis_boliviensis
ENSXMAG00000010507-8877.612ENSSHAG00000006668PUF609078.465Sarcophilus_harrisii
ENSXMAG00000010507-9878.175ENSSFOG00015019619puf60b9979.346Scleropages_formosus
ENSXMAG00000010507-9976.364ENSSFOG00015019371puf60a9882.077Scleropages_formosus
ENSXMAG00000010507-7483.838ENSSMAG00000016381puf60b7783.838Scophthalmus_maximus
ENSXMAG00000010507-9984.496ENSSDUG00000007048-9884.690Seriola_dumerili
ENSXMAG00000010507-9879.798ENSSDUG00000009935puf60b10079.798Seriola_dumerili
ENSXMAG00000010507-9879.304ENSSLDG00000024011puf60b9979.344Seriola_lalandi_dorsalis
ENSXMAG00000010507-9885.214ENSSLDG00000007366-10085.603Seriola_lalandi_dorsalis
ENSXMAG00000010507-6475.000ENSSPUG00000013518PUF609275.000Sphenodon_punctatus
ENSXMAG00000010507-9885.352ENSSPAG00000020285-10086.133Stegastes_partitus
ENSXMAG00000010507-9977.799ENSSPAG00000012144puf60b9979.344Stegastes_partitus
ENSXMAG00000010507-9979.921ENSSSCG00000038800PUF609880.671Sus_scrofa
ENSXMAG00000010507-9976.154ENSTGUG00000012797-10076.236Taeniopygia_guttata
ENSXMAG00000010507-9888.843ENSTRUG00000008843-10088.843Takifugu_rubripes
ENSXMAG00000010507-9978.667ENSTRUG00000005420puf60b9979.537Takifugu_rubripes
ENSXMAG00000010507-9978.667ENSTNIG00000013675puf60b10079.310Tetraodon_nigroviridis
ENSXMAG00000010507-9982.318ENSTNIG00000003069-10082.908Tetraodon_nigroviridis
ENSXMAG00000010507-7465.217ENSTBEG00000001899-10066.667Tupaia_belangeri
ENSXMAG00000010507-5881.879ENSTBEG00000002751-9981.879Tupaia_belangeri
ENSXMAG00000010507-9876.402ENSTTRG00000017088PUF6010077.799Tursiops_truncatus
ENSXMAG00000010507-9979.724ENSUAMG00000024917PUF609877.863Ursus_americanus
ENSXMAG00000010507-9972.381ENSUMAG00000000272PUF609472.952Ursus_maritimus
ENSXMAG00000010507-9979.724ENSVVUG00000022527PUF6010078.571Vulpes_vulpes
ENSXMAG00000010507-9879.242ENSXETG00000012469puf609879.641Xenopus_tropicalis
ENSXMAG00000010507-9881.526ENSXCOG00000012355puf60b10081.727Xiphophorus_couchianus
ENSXMAG00000010507-9981.151ENSXMAG00000001862puf60b10079.029Xiphophorus_maculatus

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