EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000010519 (Gene tree)
Gene ID: 102232973
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 20049 bases
Position: chr1:14246824-14266872
Accession: 102232973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000010555	La	PF05383.17	1.8e-17	1	1
ENSXMAP00000033746	La	PF05383.17	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000032999	-	7076	XM_014469638	ENSXMAP00000033746	800 (aa)	XP_014325124	UPI0006D92A99
ENSXMAT00000010569	-	2916	XM_023331155	ENSXMAP00000010555	786 (aa)	XP_023186923	M4A7W1

Gene Model

Click here to download ENSXMAG00000010519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000010519	larp4aa	89	57.338	ENSG00000161813	LARP4	98	62.698	Homo_sapiens
ENSXMAG00000010519	larp4aa	100	86.527	ENSAPOG00000007142	larp4aa	100	86.403	Acanthochromis_polyacanthus
ENSXMAG00000010519	larp4aa	95	51.204	ENSAPOG00000021331	larp4ab	100	51.207	Acanthochromis_polyacanthus
ENSXMAG00000010519	larp4aa	100	79.599	ENSACIG00000001198	larp4aa	100	81.352	Amphilophus_citrinellus
ENSXMAG00000010519	larp4aa	95	50.441	ENSAOCG00000006387	larp4ab	100	50.126	Amphiprion_ocellaris
ENSXMAG00000010519	larp4aa	100	86.946	ENSAOCG00000002408	larp4aa	100	86.946	Amphiprion_ocellaris
ENSXMAG00000010519	larp4aa	100	86.560	ENSAPEG00000019058	larp4aa	100	86.560	Amphiprion_percula
ENSXMAG00000010519	larp4aa	100	83.479	ENSATEG00000020715	larp4aa	100	84.461	Anabas_testudineus
ENSXMAG00000010519	larp4aa	95	49.552	ENSATEG00000001018	larp4ab	100	48.469	Anabas_testudineus
ENSXMAG00000010519	larp4aa	95	51.985	ENSAPLG00000013661	LARP4	99	53.009	Anas_platyrhynchos
ENSXMAG00000010519	larp4aa	95	50.582	ENSACAG00000017133	LARP4	96	50.064	Anolis_carolinensis
ENSXMAG00000010519	larp4aa	87	61.798	ENSANAG00000029342	LARP4	98	63.298	Aotus_nancymaae
ENSXMAG00000010519	larp4aa	100	82.051	ENSACLG00000002575	larp4aa	100	82.173	Astatotilapia_calliptera
ENSXMAG00000010519	larp4aa	100	64.439	ENSAMXG00000036493	larp4aa	100	64.664	Astyanax_mexicanus
ENSXMAG00000010519	larp4aa	100	50.852	ENSAMXG00000001515	larp4ab	100	54.227	Astyanax_mexicanus
ENSXMAG00000010519	larp4aa	95	49.936	ENSBTAG00000017164	LARP4	99	49.361	Bos_taurus
ENSXMAG00000010519	larp4aa	83	63.073	ENSCJAG00000021131	LARP4	97	63.172	Callithrix_jacchus
ENSXMAG00000010519	larp4aa	95	48.531	ENSCAFG00000008174	LARP4	99	49.362	Canis_familiaris
ENSXMAG00000010519	larp4aa	89	59.649	ENSCAFG00020014554	LARP4	99	59.649	Canis_lupus_dingo
ENSXMAG00000010519	larp4aa	95	49.744	ENSCHIG00000025965	LARP4	99	49.553	Capra_hircus
ENSXMAG00000010519	larp4aa	81	64.151	ENSTSYG00000004342	LARP4	98	63.733	Carlito_syrichta
ENSXMAG00000010519	larp4aa	94	39.050	ENSCAPG00000012942	LARP4	99	38.896	Cavia_aperea
ENSXMAG00000010519	larp4aa	95	46.075	ENSCPOG00000020519	LARP4	99	46.075	Cavia_porcellus
ENSXMAG00000010519	larp4aa	87	61.481	ENSCCAG00000024439	LARP4	98	62.766	Cebus_capucinus
ENSXMAG00000010519	larp4aa	95	47.692	ENSCATG00000044528	LARP4	99	48.843	Cercocebus_atys
ENSXMAG00000010519	larp4aa	95	47.686	ENSCLAG00000001829	LARP4	99	48.201	Chinchilla_lanigera
ENSXMAG00000010519	larp4aa	97	51.422	ENSCPBG00000019407	LARP4	92	50.677	Chrysemys_picta_bellii
ENSXMAG00000010519	larp4aa	89	57.732	ENSCANG00000029159	-	98	63.298	Colobus_angolensis_palliatus
ENSXMAG00000010519	larp4aa	95	44.402	ENSCANG00000033097	-	91	60.429	Colobus_angolensis_palliatus
ENSXMAG00000010519	larp4aa	95	49.807	ENSCGRG00001010818	Larp4	99	49.235	Cricetulus_griseus_chok1gshd
ENSXMAG00000010519	larp4aa	95	49.807	ENSCGRG00000009382	Larp4	100	49.235	Cricetulus_griseus_crigri
ENSXMAG00000010519	larp4aa	60	55.052	ENSCSEG00000003240	larp4ab	95	48.072	Cynoglossus_semilaevis
ENSXMAG00000010519	larp4aa	100	81.395	ENSCSEG00000001963	larp4aa	100	81.273	Cynoglossus_semilaevis
ENSXMAG00000010519	larp4aa	100	89.012	ENSCVAG00000005488	larp4aa	100	89.383	Cyprinodon_variegatus
ENSXMAG00000010519	larp4aa	100	63.183	ENSDARG00000078401	larp4aa	100	63.548	Danio_rerio
ENSXMAG00000010519	larp4aa	95	51.876	ENSDARG00000074979	larp4ab	78	86.232	Danio_rerio
ENSXMAG00000010519	larp4aa	55	86.667	ENSETEG00000011683	LARP4	56	86.667	Echinops_telfairi
ENSXMAG00000010519	larp4aa	66	39.474	ENSEBUG00000004426	LARP4	97	38.850	Eptatretus_burgeri
ENSXMAG00000010519	larp4aa	70	40.035	ENSEBUG00000010394	LARP4	85	39.859	Eptatretus_burgeri
ENSXMAG00000010519	larp4aa	95	48.010	ENSEASG00005004356	LARP4	100	58.898	Equus_asinus_asinus
ENSXMAG00000010519	larp4aa	95	50.193	ENSECAG00000012479	LARP4	99	51.247	Equus_caballus
ENSXMAG00000010519	larp4aa	53	85.470	ENSEEUG00000000316	LARP4	57	85.470	Erinaceus_europaeus
ENSXMAG00000010519	larp4aa	95	52.368	ENSELUG00000018650	larp4ab	85	80.702	Esox_lucius
ENSXMAG00000010519	larp4aa	100	62.607	ENSELUG00000000395	larp4aa	100	62.379	Esox_lucius
ENSXMAG00000010519	larp4aa	89	59.170	ENSFCAG00000031897	LARP4	98	62.797	Felis_catus
ENSXMAG00000010519	larp4aa	80	52.374	ENSFALG00000002114	LARP4	95	52.410	Ficedula_albicollis
ENSXMAG00000010519	larp4aa	95	49.225	ENSFDAG00000006406	-	99	49.870	Fukomys_damarensis
ENSXMAG00000010519	larp4aa	95	46.875	ENSFHEG00000013854	larp4ab	99	45.796	Fundulus_heteroclitus
ENSXMAG00000010519	larp4aa	100	88.533	ENSFHEG00000004338	larp4aa	100	88.286	Fundulus_heteroclitus
ENSXMAG00000010519	larp4aa	100	72.292	ENSGMOG00000008246	larp4aa	100	72.111	Gadus_morhua
ENSXMAG00000010519	larp4aa	90	50.802	ENSGALG00000042122	LARP4	92	51.451	Gallus_gallus
ENSXMAG00000010519	larp4aa	95	47.859	ENSGAFG00000021777	larp4ab	99	47.355	Gambusia_affinis
ENSXMAG00000010519	larp4aa	95	49.684	ENSGACG00000000680	larp4ab	99	51.448	Gasterosteus_aculeatus
ENSXMAG00000010519	larp4aa	100	77.917	ENSGACG00000008381	larp4aa	98	89.474	Gasterosteus_aculeatus
ENSXMAG00000010519	larp4aa	95	51.535	ENSGAGG00000006969	LARP4	99	51.592	Gopherus_agassizii
ENSXMAG00000010519	larp4aa	76	60.967	ENSGGOG00000015230	LARP4	95	60.967	Gorilla_gorilla
ENSXMAG00000010519	larp4aa	100	81.807	ENSHBUG00000023074	larp4aa	100	81.929	Haplochromis_burtoni
ENSXMAG00000010519	larp4aa	81	50.539	ENSHGLG00000013875	-	96	49.768	Heterocephalus_glaber_female
ENSXMAG00000010519	larp4aa	95	47.692	ENSHGLG00100011678	-	99	46.649	Heterocephalus_glaber_male
ENSXMAG00000010519	larp4aa	100	75.619	ENSHCOG00000015951	larp4aa	100	75.495	Hippocampus_comes
ENSXMAG00000010519	larp4aa	95	47.044	ENSHCOG00000020857	larp4ab	100	46.778	Hippocampus_comes
ENSXMAG00000010519	larp4aa	95	49.153	ENSIPUG00000021659	larp4ab	99	47.632	Ictalurus_punctatus
ENSXMAG00000010519	larp4aa	100	63.177	ENSIPUG00000007514	larp4aa	100	63.494	Ictalurus_punctatus
ENSXMAG00000010519	larp4aa	95	50.384	ENSSTOG00000003553	LARP4	99	49.564	Ictidomys_tridecemlineatus
ENSXMAG00000010519	larp4aa	95	48.601	ENSKMAG00000018556	larp4ab	100	48.802	Kryptolebias_marmoratus
ENSXMAG00000010519	larp4aa	100	85.608	ENSKMAG00000006800	larp4aa	100	86.352	Kryptolebias_marmoratus
ENSXMAG00000010519	larp4aa	97	83.437	ENSLBEG00000014537	larp4aa	100	81.720	Labrus_bergylta
ENSXMAG00000010519	larp4aa	95	48.837	ENSLBEG00000019306	larp4ab	100	49.100	Labrus_bergylta
ENSXMAG00000010519	larp4aa	99	51.387	ENSLACG00000019090	LARP4	99	51.389	Latimeria_chalumnae
ENSXMAG00000010519	larp4aa	100	59.273	ENSLOCG00000007113	larp4ab	100	59.853	Lepisosteus_oculatus
ENSXMAG00000010519	larp4aa	95	50.000	ENSLAFG00000005160	LARP4	99	49.678	Loxodonta_africana
ENSXMAG00000010519	larp4aa	83	63.612	ENSMFAG00000043681	LARP4	98	63.298	Macaca_fascicularis
ENSXMAG00000010519	larp4aa	83	63.612	ENSMMUG00000008172	LARP4	98	63.298	Macaca_mulatta
ENSXMAG00000010519	larp4aa	83	46.445	ENSMNEG00000037799	-	96	46.445	Macaca_nemestrina
ENSXMAG00000010519	larp4aa	94	48.031	ENSMNEG00000034602	LARP4	98	51.136	Macaca_nemestrina
ENSXMAG00000010519	larp4aa	89	57.732	ENSMLEG00000039661	LARP4	98	63.298	Mandrillus_leucophaeus
ENSXMAG00000010519	larp4aa	100	85.749	ENSMAMG00000011206	larp4aa	100	85.627	Mastacembelus_armatus
ENSXMAG00000010519	larp4aa	95	51.220	ENSMAMG00000002616	larp4ab	100	51.605	Mastacembelus_armatus
ENSXMAG00000010519	larp4aa	100	82.295	ENSMZEG00005001813	larp4aa	100	82.418	Maylandia_zebra
ENSXMAG00000010519	larp4aa	91	49.799	ENSMGAG00000010598	LARP4	92	51.687	Meleagris_gallopavo
ENSXMAG00000010519	larp4aa	74	84.615	ENSMICG00000012388	-	97	84.615	Microcebus_murinus
ENSXMAG00000010519	larp4aa	69	59.919	ENSMICG00000030156	-	99	59.919	Microcebus_murinus
ENSXMAG00000010519	larp4aa	95	49.479	ENSMOCG00000020635	Larp4	99	49.548	Microtus_ochrogaster
ENSXMAG00000010519	larp4aa	95	47.190	ENSMMOG00000021861	larp4ab	92	58.739	Mola_mola
ENSXMAG00000010519	larp4aa	100	78.025	ENSMMOG00000004785	larp4aa	100	77.531	Mola_mola
ENSXMAG00000010519	larp4aa	73	64.286	MGP_CAROLIEiJ_G0020281	Larp4	84	64.174	Mus_caroli
ENSXMAG00000010519	larp4aa	95	46.667	ENSMUSG00000023025	Larp4	99	48.957	Mus_musculus
ENSXMAG00000010519	larp4aa	95	49.739	MGP_PahariEiJ_G0020284	Larp4	99	50.130	Mus_pahari
ENSXMAG00000010519	larp4aa	95	49.613	ENSMPUG00000008706	LARP4	96	49.936	Mustela_putorius_furo
ENSXMAG00000010519	larp4aa	100	81.685	ENSNBRG00000011292	larp4aa	100	81.441	Neolamprologus_brichardi
ENSXMAG00000010519	larp4aa	89	58.419	ENSNLEG00000017798	LARP4	98	63.298	Nomascus_leucogenys
ENSXMAG00000010519	larp4aa	95	48.571	ENSODEG00000009770	LARP4	100	47.395	Octodon_degus
ENSXMAG00000010519	larp4aa	100	82.045	ENSONIG00000011895	larp4aa	100	82.668	Oreochromis_niloticus
ENSXMAG00000010519	larp4aa	95	48.528	ENSONIG00000019124	larp4ab	99	48.528	Oreochromis_niloticus
ENSXMAG00000010519	larp4aa	64	56.157	ENSOANG00000004373	LARP4	93	56.157	Ornithorhynchus_anatinus
ENSXMAG00000010519	larp4aa	95	48.980	ENSOCUG00000021417	-	99	48.404	Oryctolagus_cuniculus
ENSXMAG00000010519	larp4aa	95	49.556	ENSOCUG00000026872	-	99	48.724	Oryctolagus_cuniculus
ENSXMAG00000010519	larp4aa	100	76.601	ENSORLG00000006758	larp4aa	100	77.723	Oryzias_latipes
ENSXMAG00000010519	larp4aa	100	76.847	ENSORLG00020010258	larp4aa	100	78.025	Oryzias_latipes_hni
ENSXMAG00000010519	larp4aa	100	76.020	ENSORLG00015002292	larp4aa	100	77.228	Oryzias_latipes_hsok
ENSXMAG00000010519	larp4aa	100	74.069	ENSOMEG00000019749	larp4aa	96	86.080	Oryzias_melastigma
ENSXMAG00000010519	larp4aa	65	52.952	ENSOGAG00000001415	LARP4	99	54.275	Otolemur_garnettii
ENSXMAG00000010519	larp4aa	95	50.000	ENSOARG00000017702	LARP4	99	49.553	Ovis_aries
ENSXMAG00000010519	larp4aa	67	63.613	ENSPPAG00000035100	LARP4	85	63.032	Pan_paniscus
ENSXMAG00000010519	larp4aa	83	63.102	ENSPPRG00000004522	LARP4	98	62.797	Panthera_pardus
ENSXMAG00000010519	larp4aa	83	63.102	ENSPTIG00000015617	LARP4	98	62.797	Panthera_tigris_altaica
ENSXMAG00000010519	larp4aa	89	57.338	ENSPTRG00000004935	LARP4	98	62.698	Pan_troglodytes
ENSXMAG00000010519	larp4aa	87	62.547	ENSPANG00000022964	LARP4	98	63.830	Papio_anubis
ENSXMAG00000010519	larp4aa	100	59.080	ENSPKIG00000005950	larp4ab	100	59.304	Paramormyrops_kingsleyae
ENSXMAG00000010519	larp4aa	96	50.314	ENSPSIG00000015867	LARP4	100	49.812	Pelodiscus_sinensis
ENSXMAG00000010519	larp4aa	68	39.432	ENSPMAG00000002788	LARP4	97	41.030	Petromyzon_marinus
ENSXMAG00000010519	larp4aa	96	49.746	ENSPCIG00000000384	LARP4	99	49.806	Phascolarctos_cinereus
ENSXMAG00000010519	larp4aa	95	48.834	ENSPFOG00000009764	larp4ab	99	47.328	Poecilia_formosa
ENSXMAG00000010519	larp4aa	100	97.631	ENSPFOG00000013148	larp4aa	100	97.631	Poecilia_formosa
ENSXMAG00000010519	larp4aa	95	49.025	ENSPLAG00000008502	larp4ab	99	47.134	Poecilia_latipinna
ENSXMAG00000010519	larp4aa	100	97.589	ENSPLAG00000013626	larp4aa	100	97.589	Poecilia_latipinna
ENSXMAG00000010519	larp4aa	95	48.087	ENSPMEG00000002720	larp4ab	99	46.369	Poecilia_mexicana
ENSXMAG00000010519	larp4aa	100	97.382	ENSPMEG00000014271	larp4aa	100	97.382	Poecilia_mexicana
ENSXMAG00000010519	larp4aa	100	97.589	ENSPREG00000022597	larp4aa	100	97.589	Poecilia_reticulata
ENSXMAG00000010519	larp4aa	64	54.034	ENSPPYG00000004512	-	98	55.955	Pongo_abelii
ENSXMAG00000010519	larp4aa	90	45.913	ENSPCAG00000003671	LARP4	81	67.596	Procavia_capensis
ENSXMAG00000010519	larp4aa	83	63.539	ENSPCOG00000026291	LARP4	98	63.569	Propithecus_coquereli
ENSXMAG00000010519	larp4aa	100	82.051	ENSPNYG00000022265	larp4aa	100	82.173	Pundamilia_nyererei
ENSXMAG00000010519	larp4aa	97	61.893	ENSPNAG00000024770	larp4aa	99	62.408	Pygocentrus_nattereri
ENSXMAG00000010519	larp4aa	96	54.695	ENSPNAG00000014478	larp4ab	99	55.852	Pygocentrus_nattereri
ENSXMAG00000010519	larp4aa	85	55.870	ENSRBIG00000036890	-	99	55.870	Rhinopithecus_bieti
ENSXMAG00000010519	larp4aa	80	55.977	ENSRBIG00000038857	-	91	63.710	Rhinopithecus_bieti
ENSXMAG00000010519	larp4aa	85	55.870	ENSRROG00000025487	-	99	55.870	Rhinopithecus_roxellana
ENSXMAG00000010519	larp4aa	89	57.732	ENSRROG00000042764	-	98	63.710	Rhinopithecus_roxellana
ENSXMAG00000010519	larp4aa	83	62.534	ENSSBOG00000026650	LARP4	98	62.234	Saimiri_boliviensis_boliviensis
ENSXMAG00000010519	larp4aa	99	60.382	ENSSFOG00015003868	larp4aa	99	61.499	Scleropages_formosus
ENSXMAG00000010519	larp4aa	100	59.046	ENSSFOG00015014096	larp4ab	100	60.024	Scleropages_formosus
ENSXMAG00000010519	larp4aa	95	50.897	ENSSMAG00000002838	larp4ab	100	50.767	Scophthalmus_maximus
ENSXMAG00000010519	larp4aa	100	83.067	ENSSMAG00000019473	larp4aa	100	83.641	Scophthalmus_maximus
ENSXMAG00000010519	larp4aa	95	51.724	ENSSDUG00000006655	larp4ab	100	51.324	Seriola_dumerili
ENSXMAG00000010519	larp4aa	100	85.644	ENSSDUG00000010621	larp4aa	100	86.380	Seriola_dumerili
ENSXMAG00000010519	larp4aa	95	50.505	ENSSLDG00000001791	larp4ab	100	50.378	Seriola_lalandi_dorsalis
ENSXMAG00000010519	larp4aa	100	85.890	ENSSLDG00000004942	larp4aa	100	85.890	Seriola_lalandi_dorsalis
ENSXMAG00000010519	larp4aa	63	61.757	ENSSARG00000012469	LARP4	89	54.137	Sorex_araneus
ENSXMAG00000010519	larp4aa	90	48.336	ENSSPUG00000016552	LARP4	92	48.525	Sphenodon_punctatus
ENSXMAG00000010519	larp4aa	95	51.527	ENSSPAG00000002172	larp4ab	100	50.960	Stegastes_partitus
ENSXMAG00000010519	larp4aa	85	91.203	ENSSPAG00000007222	larp4aa	93	91.203	Stegastes_partitus
ENSXMAG00000010519	larp4aa	95	46.970	ENSSSCG00000028516	LARP4	85	66.769	Sus_scrofa
ENSXMAG00000010519	larp4aa	95	49.677	ENSTGUG00000003479	LARP4	99	50.712	Taeniopygia_guttata
ENSXMAG00000010519	larp4aa	95	46.624	ENSTRUG00000007206	larp4ab	100	45.153	Takifugu_rubripes
ENSXMAG00000010519	larp4aa	95	75.099	ENSTNIG00000015109	larp4aa	99	74.507	Tetraodon_nigroviridis
ENSXMAG00000010519	larp4aa	95	45.594	ENSTNIG00000014571	larp4ab	100	44.040	Tetraodon_nigroviridis
ENSXMAG00000010519	larp4aa	80	53.314	ENSTBEG00000005167	LARP4	84	53.314	Tupaia_belangeri
ENSXMAG00000010519	larp4aa	95	48.840	ENSTTRG00000003764	LARP4	99	48.196	Tursiops_truncatus
ENSXMAG00000010519	larp4aa	65	56.309	ENSUAMG00000013764	LARP4	98	56.180	Ursus_americanus
ENSXMAG00000010519	larp4aa	95	49.807	ENSUMAG00000008473	LARP4	99	49.872	Ursus_maritimus
ENSXMAG00000010519	larp4aa	95	49.172	ENSVPAG00000010136	LARP4	99	49.427	Vicugna_pacos
ENSXMAG00000010519	larp4aa	89	59.649	ENSVVUG00000024717	LARP4	99	59.649	Vulpes_vulpes
ENSXMAG00000010519	larp4aa	87	52.933	ENSXETG00000007283	larp4	95	52.933	Xenopus_tropicalis
ENSXMAG00000010519	larp4aa	100	93.125	ENSXCOG00000006387	larp4aa	100	93.125	Xiphophorus_couchianus
ENSXMAG00000010519	larp4aa	95	48.329	ENSXMAG00000002156	larp4ab	99	47.294	Xiphophorus_maculatus