EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000010523 (Gene tree)
Gene ID: 102222242
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4358 bases
Position: chr9:27244458-27248815
Accession: 102222242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000010552	zf-C2H2	PF00096.26	6.2e-31	1	6
ENSXMAP00000010552	zf-C2H2	PF00096.26	6.2e-31	2	6
ENSXMAP00000010552	zf-C2H2	PF00096.26	6.2e-31	3	6
ENSXMAP00000010552	zf-C2H2	PF00096.26	6.2e-31	4	6
ENSXMAP00000010552	zf-C2H2	PF00096.26	6.2e-31	5	6
ENSXMAP00000010552	zf-C2H2	PF00096.26	6.2e-31	6	6
ENSXMAP00000010552	zf-met	PF12874.7	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000010566	-	2701	XM_023339108	ENSXMAP00000010552	389 (aa)	XP_023194876	M4A7V8

Gene Model

Click here to download ENSXMAG00000010523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000010523	gfi1ab	100	62.353	ENSG00000162676	GFI1	100	62.588	Homo_sapiens
ENSXMAG00000010523	gfi1ab	100	84.051	ENSAPOG00000015189	gfi1ab	100	84.051	Acanthochromis_polyacanthus
ENSXMAG00000010523	gfi1ab	100	81.795	ENSACIG00000016354	gfi1ab	100	81.795	Amphilophus_citrinellus
ENSXMAG00000010523	gfi1ab	100	73.791	ENSAOCG00000008339	gfi1ab	100	73.791	Amphiprion_ocellaris
ENSXMAG00000010523	gfi1ab	100	84.304	ENSAPEG00000023870	gfi1ab	100	84.304	Amphiprion_percula
ENSXMAG00000010523	gfi1ab	100	77.121	ENSATEG00000009167	gfi1ab	89	77.121	Anabas_testudineus
ENSXMAG00000010523	gfi1ab	86	65.242	ENSAPLG00000015700	GFI1	99	65.242	Anas_platyrhynchos
ENSXMAG00000010523	gfi1ab	100	63.415	ENSACAG00000004498	GFI1	100	63.902	Anolis_carolinensis
ENSXMAG00000010523	gfi1ab	100	61.972	ENSANAG00000019656	GFI1	100	61.972	Aotus_nancymaae
ENSXMAG00000010523	gfi1ab	100	85.385	ENSACLG00000026458	gfi1ab	93	85.385	Astatotilapia_calliptera
ENSXMAG00000010523	gfi1ab	100	64.662	ENSAMXG00000039600	gfi1ab	100	64.662	Astyanax_mexicanus
ENSXMAG00000010523	gfi1ab	100	53.470	ENSAMXG00000006669	GFI1	100	53.470	Astyanax_mexicanus
ENSXMAG00000010523	gfi1ab	100	59.674	ENSBTAG00000016723	GFI1	100	61.860	Bos_taurus
ENSXMAG00000010523	gfi1ab	100	61.882	ENSCJAG00000017609	GFI1	100	62.118	Callithrix_jacchus
ENSXMAG00000010523	gfi1ab	100	60.698	ENSCAFG00000020155	GFI1	100	61.628	Canis_familiaris
ENSXMAG00000010523	gfi1ab	100	61.163	ENSCAFG00020013371	GFI1	88	61.628	Canis_lupus_dingo
ENSXMAG00000010523	gfi1ab	100	59.535	ENSCHIG00000016135	GFI1	100	61.628	Capra_hircus
ENSXMAG00000010523	gfi1ab	100	61.215	ENSCPOG00000011727	GFI1	100	61.916	Cavia_porcellus
ENSXMAG00000010523	gfi1ab	100	61.176	ENSCCAG00000036072	GFI1	100	61.412	Cebus_capucinus
ENSXMAG00000010523	gfi1ab	100	62.588	ENSCATG00000037873	GFI1	100	62.824	Cercocebus_atys
ENSXMAG00000010523	gfi1ab	100	64.373	ENSCLAG00000005915	GFI1	100	60.412	Chinchilla_lanigera
ENSXMAG00000010523	gfi1ab	98	57.221	ENSCSAG00000001469	GFI1	100	57.493	Chlorocebus_sabaeus
ENSXMAG00000010523	gfi1ab	100	62.824	ENSCANG00000034077	GFI1	100	63.059	Colobus_angolensis_palliatus
ENSXMAG00000010523	gfi1ab	100	60.000	ENSCGRG00001015432	Gfi1	100	61.176	Cricetulus_griseus_chok1gshd
ENSXMAG00000010523	gfi1ab	100	61.654	ENSCSEG00000017729	GFI1	100	61.905	Cynoglossus_semilaevis
ENSXMAG00000010523	gfi1ab	100	88.689	ENSCVAG00000011828	gfi1ab	100	88.689	Cyprinodon_variegatus
ENSXMAG00000010523	gfi1ab	100	58.809	ENSCVAG00000004930	GFI1	100	60.000	Cyprinodon_variegatus
ENSXMAG00000010523	gfi1ab	100	70.250	ENSDARG00000044457	gfi1ab	100	70.250	Danio_rerio
ENSXMAG00000010523	gfi1ab	100	60.092	ENSDNOG00000000782	GFI1	97	61.827	Dasypus_novemcinctus
ENSXMAG00000010523	gfi1ab	100	79.570	ENSEBUG00000008075	gfi1ab	62	79.570	Eptatretus_burgeri
ENSXMAG00000010523	gfi1ab	100	61.682	ENSEASG00005015509	GFI1	86	62.150	Equus_asinus_asinus
ENSXMAG00000010523	gfi1ab	98	53.133	ENSECAG00000006647	GFI1	94	53.598	Equus_caballus
ENSXMAG00000010523	gfi1ab	100	60.142	ENSEEUG00000000198	GFI1	100	60.377	Erinaceus_europaeus
ENSXMAG00000010523	gfi1ab	100	72.772	ENSELUG00000003015	gfi1ab	99	72.772	Esox_lucius
ENSXMAG00000010523	gfi1ab	51	58.294	ENSELUG00000006948	-	62	58.294	Esox_lucius
ENSXMAG00000010523	gfi1ab	100	62.000	ENSELUG00000019033	GFI1	100	62.250	Esox_lucius
ENSXMAG00000010523	gfi1ab	100	60.880	ENSFCAG00000005914	GFI1	100	61.343	Felis_catus
ENSXMAG00000010523	gfi1ab	100	91.260	ENSFHEG00000010997	gfi1ab	100	91.260	Fundulus_heteroclitus
ENSXMAG00000010523	gfi1ab	100	62.315	ENSFHEG00000000341	GFI1	100	62.562	Fundulus_heteroclitus
ENSXMAG00000010523	gfi1ab	100	73.232	ENSGMOG00000007737	gfi1ab	100	73.232	Gadus_morhua
ENSXMAG00000010523	gfi1ab	100	64.320	ENSGALG00000043650	GFI1	100	64.563	Gallus_gallus
ENSXMAG00000010523	gfi1ab	100	58.824	ENSGAFG00000018063	GFI1	100	60.922	Gambusia_affinis
ENSXMAG00000010523	gfi1ab	100	96.931	ENSGAFG00000016637	gfi1ab	100	96.931	Gambusia_affinis
ENSXMAG00000010523	gfi1ab	100	81.234	ENSGACG00000004257	gfi1ab	97	81.491	Gasterosteus_aculeatus
ENSXMAG00000010523	gfi1ab	100	62.353	ENSGGOG00000005320	GFI1	100	62.588	Gorilla_gorilla
ENSXMAG00000010523	gfi1ab	100	83.333	ENSHBUG00000011969	gfi1ab	100	83.333	Haplochromis_burtoni
ENSXMAG00000010523	gfi1ab	100	62.383	ENSHGLG00000008020	GFI1	100	62.884	Heterocephalus_glaber_female
ENSXMAG00000010523	gfi1ab	100	62.383	ENSHGLG00100000610	GFI1	100	62.884	Heterocephalus_glaber_male
ENSXMAG00000010523	gfi1ab	100	62.440	ENSHCOG00000008590	gfi1ab	100	62.440	Hippocampus_comes
ENSXMAG00000010523	gfi1ab	100	61.842	ENSHCOG00000019555	GFI1	100	61.842	Hippocampus_comes
ENSXMAG00000010523	gfi1ab	100	64.039	ENSIPUG00000010071	gfi1ab	87	64.286	Ictalurus_punctatus
ENSXMAG00000010523	gfi1ab	100	59.113	ENSIPUG00000013414	GFI1	100	59.113	Ictalurus_punctatus
ENSXMAG00000010523	gfi1ab	99	64.706	ENSIPUG00000021407	-	96	64.706	Ictalurus_punctatus
ENSXMAG00000010523	gfi1ab	100	61.647	ENSSTOG00000014583	GFI1	100	62.118	Ictidomys_tridecemlineatus
ENSXMAG00000010523	gfi1ab	100	83.033	ENSKMAG00000003810	gfi1ab	100	83.033	Kryptolebias_marmoratus
ENSXMAG00000010523	gfi1ab	100	83.503	ENSLBEG00000027776	gfi1ab	100	83.503	Labrus_bergylta
ENSXMAG00000010523	gfi1ab	100	65.111	ENSLACG00000013362	GFI1	98	65.111	Latimeria_chalumnae
ENSXMAG00000010523	gfi1ab	100	69.403	ENSLOCG00000004711	gfi1ab	100	69.652	Lepisosteus_oculatus
ENSXMAG00000010523	gfi1ab	100	59.479	ENSLAFG00000018346	GFI1	100	60.900	Loxodonta_africana
ENSXMAG00000010523	gfi1ab	100	62.588	ENSMFAG00000045801	GFI1	100	62.824	Macaca_fascicularis
ENSXMAG00000010523	gfi1ab	100	62.588	ENSMNEG00000036338	GFI1	100	62.824	Macaca_nemestrina
ENSXMAG00000010523	gfi1ab	100	62.588	ENSMLEG00000036181	GFI1	100	62.824	Mandrillus_leucophaeus
ENSXMAG00000010523	gfi1ab	100	83.805	ENSMAMG00000008125	gfi1ab	100	83.805	Mastacembelus_armatus
ENSXMAG00000010523	gfi1ab	100	85.641	ENSMZEG00005009895	gfi1ab	100	85.641	Maylandia_zebra
ENSXMAG00000010523	gfi1ab	86	66.286	ENSMGAG00000008187	GFI1	99	66.286	Meleagris_gallopavo
ENSXMAG00000010523	gfi1ab	100	60.329	ENSMICG00000047208	GFI1	100	60.798	Microcebus_murinus
ENSXMAG00000010523	gfi1ab	100	73.604	ENSMMOG00000005556	gfi1ab	100	73.604	Mola_mola
ENSXMAG00000010523	gfi1ab	100	58.486	ENSMODG00000011802	GFI1	100	61.502	Monodelphis_domestica
ENSXMAG00000010523	gfi1ab	100	80.720	ENSMALG00000014672	gfi1ab	100	80.720	Monopterus_albus
ENSXMAG00000010523	gfi1ab	100	59.767	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSXMAG00000010523	gfi1ab	100	59.535	ENSMUSG00000029275	Gfi1	100	60.233	Mus_musculus
ENSXMAG00000010523	gfi1ab	100	59.767	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSXMAG00000010523	gfi1ab	100	59.767	MGP_SPRETEiJ_G0028507	Gfi1	100	60.465	Mus_spretus
ENSXMAG00000010523	gfi1ab	100	64.662	ENSMPUG00000004178	GFI1	97	64.824	Mustela_putorius_furo
ENSXMAG00000010523	gfi1ab	100	60.280	ENSMLUG00000015191	GFI1	97	60.981	Myotis_lucifugus
ENSXMAG00000010523	gfi1ab	100	82.532	ENSNBRG00000015774	gfi1ab	100	82.532	Neolamprologus_brichardi
ENSXMAG00000010523	gfi1ab	86	64.770	ENSNLEG00000010470	GFI1	91	65.041	Nomascus_leucogenys
ENSXMAG00000010523	gfi1ab	100	60.325	ENSOPRG00000001473	GFI1	100	61.647	Ochotona_princeps
ENSXMAG00000010523	gfi1ab	100	85.128	ENSONIG00000019246	gfi1ab	100	85.128	Oreochromis_niloticus
ENSXMAG00000010523	gfi1ab	98	54.667	ENSOCUG00000023553	GFI1	93	54.933	Oryctolagus_cuniculus
ENSXMAG00000010523	gfi1ab	100	77.892	ENSORLG00000013806	gfi1ab	100	77.892	Oryzias_latipes
ENSXMAG00000010523	gfi1ab	100	61.576	ENSORLG00000005060	GFI1	100	61.823	Oryzias_latipes
ENSXMAG00000010523	gfi1ab	100	54.156	ENSORLG00020002817	GFI1	100	54.156	Oryzias_latipes_hni
ENSXMAG00000010523	gfi1ab	100	78.149	ENSORLG00020001602	gfi1ab	100	78.149	Oryzias_latipes_hni
ENSXMAG00000010523	gfi1ab	100	58.128	ENSORLG00015006070	GFI1	100	60.591	Oryzias_latipes_hsok
ENSXMAG00000010523	gfi1ab	100	61.042	ENSOMEG00000016722	GFI1	100	62.035	Oryzias_melastigma
ENSXMAG00000010523	gfi1ab	100	63.544	ENSOGAG00000027913	GFI1	100	63.797	Otolemur_garnettii
ENSXMAG00000010523	gfi1ab	98	54.491	ENSOARG00000016329	GFI1	94	54.491	Ovis_aries
ENSXMAG00000010523	gfi1ab	100	63.683	ENSPPAG00000042186	GFI1	100	63.939	Pan_paniscus
ENSXMAG00000010523	gfi1ab	100	60.880	ENSPPRG00000007521	GFI1	100	61.343	Panthera_pardus
ENSXMAG00000010523	gfi1ab	100	61.882	ENSPTRG00000043053	GFI1	100	62.118	Pan_troglodytes
ENSXMAG00000010523	gfi1ab	100	62.588	ENSPANG00000016433	GFI1	100	62.824	Papio_anubis
ENSXMAG00000010523	gfi1ab	100	70.968	ENSPKIG00000004263	GFI1	100	70.968	Paramormyrops_kingsleyae
ENSXMAG00000010523	gfi1ab	86	65.903	ENSPSIG00000008734	GFI1	96	66.189	Pelodiscus_sinensis
ENSXMAG00000010523	gfi1ab	100	74.809	ENSPMGG00000012546	gfi1ab	100	75.064	Periophthalmus_magnuspinnatus
ENSXMAG00000010523	gfi1ab	54	91.667	ENSPMGG00000011041	GFI1	67	91.667	Periophthalmus_magnuspinnatus
ENSXMAG00000010523	gfi1ab	100	61.702	ENSPCIG00000013728	GFI1	100	62.175	Phascolarctos_cinereus
ENSXMAG00000010523	gfi1ab	100	96.931	ENSPFOG00000023214	gfi1ab	100	96.931	Poecilia_formosa
ENSXMAG00000010523	gfi1ab	100	60.870	ENSPLAG00000005376	GFI1	91	61.111	Poecilia_latipinna
ENSXMAG00000010523	gfi1ab	100	96.931	ENSPLAG00000010879	gfi1ab	100	96.931	Poecilia_latipinna
ENSXMAG00000010523	gfi1ab	100	97.187	ENSPMEG00000013694	gfi1ab	100	97.187	Poecilia_mexicana
ENSXMAG00000010523	gfi1ab	100	60.732	ENSPMEG00000019299	GFI1	100	61.463	Poecilia_mexicana
ENSXMAG00000010523	gfi1ab	100	56.010	ENSPREG00000007997	GFI1	100	55.754	Poecilia_reticulata
ENSXMAG00000010523	gfi1ab	100	96.915	ENSPREG00000014097	gfi1ab	100	96.915	Poecilia_reticulata
ENSXMAG00000010523	gfi1ab	100	51.049	ENSPCAG00000011020	GFI1	100	51.049	Procavia_capensis
ENSXMAG00000010523	gfi1ab	100	60.798	ENSPCOG00000020540	GFI1	100	61.268	Propithecus_coquereli
ENSXMAG00000010523	gfi1ab	100	61.215	ENSPVAG00000006928	GFI1	100	62.061	Pteropus_vampyrus
ENSXMAG00000010523	gfi1ab	100	85.385	ENSPNYG00000021183	gfi1ab	100	85.385	Pundamilia_nyererei
ENSXMAG00000010523	gfi1ab	100	62.712	ENSPNAG00000014299	-	97	62.712	Pygocentrus_nattereri
ENSXMAG00000010523	gfi1ab	100	65.915	ENSPNAG00000027258	gfi1ab	100	65.915	Pygocentrus_nattereri
ENSXMAG00000010523	gfi1ab	100	57.250	ENSPNAG00000028014	GFI1	100	57.250	Pygocentrus_nattereri
ENSXMAG00000010523	gfi1ab	100	59.767	ENSRNOG00000002042	Gfi1	100	60.000	Rattus_norvegicus
ENSXMAG00000010523	gfi1ab	100	62.824	ENSRBIG00000036467	GFI1	100	63.294	Rhinopithecus_bieti
ENSXMAG00000010523	gfi1ab	100	62.824	ENSRROG00000031687	GFI1	100	63.294	Rhinopithecus_roxellana
ENSXMAG00000010523	gfi1ab	100	60.471	ENSSBOG00000031300	GFI1	100	62.118	Saimiri_boliviensis_boliviensis
ENSXMAG00000010523	gfi1ab	100	71.111	ENSSFOG00015020295	gfi1	100	71.111	Scleropages_formosus
ENSXMAG00000010523	gfi1ab	99	44.118	ENSSFOG00015008114	-	69	52.679	Scleropages_formosus
ENSXMAG00000010523	gfi1ab	100	78.880	ENSSMAG00000002782	gfi1ab	100	78.880	Scophthalmus_maximus
ENSXMAG00000010523	gfi1ab	100	80.977	ENSSDUG00000022410	gfi1ab	100	81.234	Seriola_dumerili
ENSXMAG00000010523	gfi1ab	100	81.234	ENSSLDG00000020163	gfi1ab	100	81.491	Seriola_lalandi_dorsalis
ENSXMAG00000010523	gfi1ab	79	84.848	ENSSPAG00000009140	gfi1ab	100	87.500	Stegastes_partitus
ENSXMAG00000010523	gfi1ab	100	62.824	ENSSSCG00000006902	GFI1	100	64.762	Sus_scrofa
ENSXMAG00000010523	gfi1ab	86	66.667	ENSTGUG00000006060	GFI1	99	66.667	Taeniopygia_guttata
ENSXMAG00000010523	gfi1ab	100	76.410	ENSTRUG00000000415	gfi1ab	100	76.410	Takifugu_rubripes
ENSXMAG00000010523	gfi1ab	100	73.924	ENSTNIG00000000651	gfi1ab	97	73.924	Tetraodon_nigroviridis
ENSXMAG00000010523	gfi1ab	100	60.047	ENSTTRG00000000082	GFI1	100	62.559	Tursiops_truncatus
ENSXMAG00000010523	gfi1ab	100	62.410	ENSUAMG00000021124	GFI1	91	63.133	Ursus_americanus
ENSXMAG00000010523	gfi1ab	100	62.750	ENSXETG00000023006	gfi1	98	63.000	Xenopus_tropicalis
ENSXMAG00000010523	gfi1ab	86	54.674	ENSXMAG00000009274	GFI1	70	55.462	Xiphophorus_maculatus