EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000010927 (Gene tree)
Gene ID: 102231836
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 25220 bases
Position: chr3:2211446-2236665
Accession: 102231836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000010984	tRNA-synt_1g	PF09334.11	5.7e-13	1	1
ENSXMAP00000010984	Anticodon_1	PF08264.13	6.1e-36	1	1
ENSXMAP00000010984	tRNA-synt_1	PF00133.22	2.4e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000010998	-	3937	XM_014468685	ENSXMAP00000010984	1274 (aa)	XP_014324171	M4A940

Gene Model

Click here to download ENSXMAG00000010927's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000010927	vars	100	65.292	ENSG00000204394	VARS	99	72.699	Homo_sapiens
ENSXMAG00000010927	vars	94	90.183	ENSAPOG00000020691	vars	96	90.183	Acanthochromis_polyacanthus
ENSXMAG00000010927	vars	94	90.183	ENSAPOG00000020921	vars	96	90.183	Acanthochromis_polyacanthus
ENSXMAG00000010927	vars	100	65.474	ENSAMEG00000006417	VARS	100	65.474	Ailuropoda_melanoleuca
ENSXMAG00000010927	vars	100	89.734	ENSACIG00000013752	vars	100	89.734	Amphilophus_citrinellus
ENSXMAG00000010927	vars	100	90.659	ENSAOCG00000002447	vars	99	90.659	Amphiprion_ocellaris
ENSXMAG00000010927	vars	100	90.502	ENSAPEG00000010638	vars	99	90.502	Amphiprion_percula
ENSXMAG00000010927	vars	100	85.435	ENSATEG00000020219	vars	100	85.121	Anabas_testudineus
ENSXMAG00000010927	vars	90	71.875	ENSACAG00000029133	-	99	71.875	Anolis_carolinensis
ENSXMAG00000010927	vars	100	65.370	ENSANAG00000015453	VARS	100	65.370	Aotus_nancymaae
ENSXMAG00000010927	vars	100	91.144	ENSACLG00000025699	vars	97	91.144	Astatotilapia_calliptera
ENSXMAG00000010927	vars	96	79.967	ENSAMXG00000017716	vars	96	79.967	Astyanax_mexicanus
ENSXMAG00000010927	vars	100	65.681	ENSBTAG00000005631	VARS	100	65.681	Bos_taurus
ENSXMAG00000010927	vars	100	65.136	ENSCJAG00000002604	VARS	100	65.136	Callithrix_jacchus
ENSXMAG00000010927	vars	100	65.214	ENSCAFG00000000636	VARS	100	65.214	Canis_familiaris
ENSXMAG00000010927	vars	94	66.639	ENSCAFG00020020790	VARS	96	66.639	Canis_lupus_dingo
ENSXMAG00000010927	vars	100	65.681	ENSCHIG00000011008	VARS	100	65.681	Capra_hircus
ENSXMAG00000010927	vars	100	65.214	ENSTSYG00000001567	VARS	100	65.214	Carlito_syrichta
ENSXMAG00000010927	vars	91	68.307	ENSCAPG00000013736	VARS	98	67.993	Cavia_aperea
ENSXMAG00000010927	vars	100	64.957	ENSCPOG00000000870	VARS	100	64.669	Cavia_porcellus
ENSXMAG00000010927	vars	100	65.447	ENSCCAG00000035656	VARS	100	65.292	Cebus_capucinus
ENSXMAG00000010927	vars	100	65.579	ENSCATG00000022394	VARS	100	65.603	Cercocebus_atys
ENSXMAG00000010927	vars	93	64.303	ENSCLAG00000009470	VARS	97	64.000	Chinchilla_lanigera
ENSXMAG00000010927	vars	100	65.346	ENSCSAG00000008784	VARS	100	65.370	Chlorocebus_sabaeus
ENSXMAG00000010927	vars	77	74.924	ENSCPBG00000007943	VARS	96	74.924	Chrysemys_picta_bellii
ENSXMAG00000010927	vars	100	65.501	ENSCANG00000033570	VARS	100	65.525	Colobus_angolensis_palliatus
ENSXMAG00000010927	vars	100	65.214	ENSCGRG00001005686	Vars	100	65.292	Cricetulus_griseus_chok1gshd
ENSXMAG00000010927	vars	93	63.292	ENSCGRG00000013352	Vars	78	63.374	Cricetulus_griseus_crigri
ENSXMAG00000010927	vars	100	82.367	ENSCSEG00000019652	vars	100	82.132	Cynoglossus_semilaevis
ENSXMAG00000010927	vars	100	95.219	ENSCVAG00000022398	vars	100	95.219	Cyprinodon_variegatus
ENSXMAG00000010927	vars	100	84.260	ENSDARG00000044575	vars	100	84.338	Danio_rerio
ENSXMAG00000010927	vars	85	68.767	ENSDORG00000016433	Vars	99	68.857	Dipodomys_ordii
ENSXMAG00000010927	vars	68	74.322	ENSETEG00000003824	VARS	77	74.322	Echinops_telfairi
ENSXMAG00000010927	vars	52	72.097	ENSEBUG00000007086	vars	83	72.097	Eptatretus_burgeri
ENSXMAG00000010927	vars	57	65.116	ENSEBUG00000004637	vars	100	65.116	Eptatretus_burgeri
ENSXMAG00000010927	vars	100	66.070	ENSEASG00005015673	VARS	100	66.070	Equus_asinus_asinus
ENSXMAG00000010927	vars	100	66.019	ENSECAG00000014620	VARS	100	66.252	Equus_caballus
ENSXMAG00000010927	vars	72	71.930	ENSEEUG00000004116	VARS	73	71.930	Erinaceus_europaeus
ENSXMAG00000010927	vars	100	83.307	ENSELUG00000006550	vars	97	83.476	Esox_lucius
ENSXMAG00000010927	vars	100	65.603	ENSFCAG00000004510	VARS	100	65.759	Felis_catus
ENSXMAG00000010927	vars	83	70.722	ENSFDAG00000011401	VARS	100	70.536	Fukomys_damarensis
ENSXMAG00000010927	vars	100	93.417	ENSFHEG00000010672	vars	100	93.809	Fundulus_heteroclitus
ENSXMAG00000010927	vars	100	81.464	ENSGMOG00000014908	vars	100	81.620	Gadus_morhua
ENSXMAG00000010927	vars	100	98.587	ENSGAFG00000021630	vars	100	98.587	Gambusia_affinis
ENSXMAG00000010927	vars	100	83.959	ENSGACG00000009601	vars	100	84.194	Gasterosteus_aculeatus
ENSXMAG00000010927	vars	50	57.500	ENSGAGG00000006508	-	91	59.375	Gopherus_agassizii
ENSXMAG00000010927	vars	100	65.603	ENSGGOG00000011364	VARS	100	65.603	Gorilla_gorilla
ENSXMAG00000010927	vars	100	91.223	ENSHBUG00000017151	vars	97	91.223	Haplochromis_burtoni
ENSXMAG00000010927	vars	100	65.109	ENSHGLG00000011646	VARS	100	65.109	Heterocephalus_glaber_female
ENSXMAG00000010927	vars	94	61.671	ENSHGLG00100018062	VARS	99	61.311	Heterocephalus_glaber_male
ENSXMAG00000010927	vars	99	84.910	ENSHCOG00000012198	vars	99	84.965	Hippocampus_comes
ENSXMAG00000010927	vars	100	83.177	ENSIPUG00000005218	vars	100	83.255	Ictalurus_punctatus
ENSXMAG00000010927	vars	100	65.837	ENSSTOG00000013112	VARS	100	65.759	Ictidomys_tridecemlineatus
ENSXMAG00000010927	vars	100	53.167	ENSJJAG00000015343	-	99	54.633	Jaculus_jaculus
ENSXMAG00000010927	vars	100	65.163	ENSJJAG00000019749	-	100	64.848	Jaculus_jaculus
ENSXMAG00000010927	vars	100	88.148	ENSKMAG00000009455	vars	100	88.148	Kryptolebias_marmoratus
ENSXMAG00000010927	vars	100	85.899	ENSLBEG00000010341	vars	100	85.165	Labrus_bergylta
ENSXMAG00000010927	vars	94	66.612	ENSLACG00000015232	VARS	99	66.694	Latimeria_chalumnae
ENSXMAG00000010927	vars	100	75.216	ENSLOCG00000004240	vars	100	74.980	Lepisosteus_oculatus
ENSXMAG00000010927	vars	100	65.421	ENSLAFG00000023090	VARS	100	65.421	Loxodonta_africana
ENSXMAG00000010927	vars	100	65.423	ENSMFAG00000001032	VARS	100	65.447	Macaca_fascicularis
ENSXMAG00000010927	vars	100	65.423	ENSMMUG00000006828	VARS	100	65.447	Macaca_mulatta
ENSXMAG00000010927	vars	100	65.423	ENSMNEG00000042072	VARS	100	65.447	Macaca_nemestrina
ENSXMAG00000010927	vars	100	65.501	ENSMLEG00000039307	VARS	100	65.525	Mandrillus_leucophaeus
ENSXMAG00000010927	vars	100	88.540	ENSMAMG00000003949	vars	100	88.619	Mastacembelus_armatus
ENSXMAG00000010927	vars	100	91.223	ENSMZEG00005018327	vars	97	91.223	Maylandia_zebra
ENSXMAG00000010927	vars	100	64.981	ENSMAUG00000006715	Vars	100	65.058	Mesocricetus_auratus
ENSXMAG00000010927	vars	100	65.528	ENSMICG00000003548	VARS	100	65.447	Microcebus_murinus
ENSXMAG00000010927	vars	100	64.252	ENSMOCG00000015404	Vars	100	64.252	Microtus_ochrogaster
ENSXMAG00000010927	vars	100	85.871	ENSMMOG00000015801	vars	100	85.793	Mola_mola
ENSXMAG00000010927	vars	100	65.759	ENSMODG00000015204	-	100	65.681	Monodelphis_domestica
ENSXMAG00000010927	vars	99	89.428	ENSMALG00000022532	vars	99	89.428	Monopterus_albus
ENSXMAG00000010927	vars	100	65.888	MGP_CAROLIEiJ_G0021491	Vars	100	65.888	Mus_caroli
ENSXMAG00000010927	vars	100	65.732	ENSMUSG00000007029	Vars	100	65.732	Mus_musculus
ENSXMAG00000010927	vars	100	65.654	MGP_PahariEiJ_G0020486	Vars	100	65.654	Mus_pahari
ENSXMAG00000010927	vars	100	65.810	MGP_SPRETEiJ_G0022396	Vars	100	65.810	Mus_spretus
ENSXMAG00000010927	vars	100	65.525	ENSMPUG00000010821	VARS	100	65.525	Mustela_putorius_furo
ENSXMAG00000010927	vars	78	68.495	ENSMLUG00000013126	VARS	100	68.495	Myotis_lucifugus
ENSXMAG00000010927	vars	100	65.187	ENSNGAG00000012151	Vars	100	65.187	Nannospalax_galili
ENSXMAG00000010927	vars	100	90.909	ENSNBRG00000020520	vars	100	90.909	Neolamprologus_brichardi
ENSXMAG00000010927	vars	100	65.525	ENSNLEG00000006351	VARS	100	65.525	Nomascus_leucogenys
ENSXMAG00000010927	vars	100	64.019	ENSMEUG00000011378	VARS	100	64.097	Notamacropus_eugenii
ENSXMAG00000010927	vars	100	65.525	ENSOPRG00000003607	VARS	100	65.603	Ochotona_princeps
ENSXMAG00000010927	vars	100	64.720	ENSODEG00000017681	VARS	100	64.720	Octodon_degus
ENSXMAG00000010927	vars	100	90.469	ENSONIG00000013064	vars	100	91.638	Oreochromis_niloticus
ENSXMAG00000010927	vars	77	67.609	ENSOANG00000005400	VARS	98	67.609	Ornithorhynchus_anatinus
ENSXMAG00000010927	vars	100	64.252	ENSOCUG00000022463	VARS	100	63.988	Oryctolagus_cuniculus
ENSXMAG00000010927	vars	100	88.656	ENSORLG00000013063	vars	100	88.949	Oryzias_latipes
ENSXMAG00000010927	vars	100	88.837	ENSORLG00020003504	vars	100	89.289	Oryzias_latipes_hni
ENSXMAG00000010927	vars	100	89.515	ENSORLG00015009001	vars	100	89.515	Oryzias_latipes_hsok
ENSXMAG00000010927	vars	100	89.906	ENSOMEG00000015016	vars	100	89.906	Oryzias_melastigma
ENSXMAG00000010927	vars	100	65.214	ENSOGAG00000007515	VARS	100	65.214	Otolemur_garnettii
ENSXMAG00000010927	vars	100	65.292	ENSPPAG00000034012	VARS	100	65.292	Pan_paniscus
ENSXMAG00000010927	vars	100	65.603	ENSPPRG00000014855	VARS	100	65.759	Panthera_pardus
ENSXMAG00000010927	vars	86	69.589	ENSPTIG00000010462	VARS	93	69.772	Panthera_tigris_altaica
ENSXMAG00000010927	vars	100	65.292	ENSPTRG00000017985	VARS	100	65.292	Pan_troglodytes
ENSXMAG00000010927	vars	100	63.960	ENSPANG00000014565	VARS	100	63.981	Papio_anubis
ENSXMAG00000010927	vars	100	80.156	ENSPKIG00000016304	vars	100	80.156	Paramormyrops_kingsleyae
ENSXMAG00000010927	vars	100	83.987	ENSPMGG00000023909	vars	100	83.752	Periophthalmus_magnuspinnatus
ENSXMAG00000010927	vars	100	65.292	ENSPEMG00000006639	Vars	100	65.370	Peromyscus_maniculatus_bairdii
ENSXMAG00000010927	vars	100	65.525	ENSPCIG00000018553	VARS	100	65.447	Phascolarctos_cinereus
ENSXMAG00000010927	vars	100	97.724	ENSPFOG00000015690	vars	100	97.724	Poecilia_formosa
ENSXMAG00000010927	vars	100	97.488	ENSPLAG00000009590	vars	100	97.488	Poecilia_latipinna
ENSXMAG00000010927	vars	100	97.645	ENSPMEG00000004708	vars	100	97.645	Poecilia_mexicana
ENSXMAG00000010927	vars	100	92.072	ENSPREG00000013264	vars	100	92.072	Poecilia_reticulata
ENSXMAG00000010927	vars	100	63.608	ENSPPYG00000016460	VARS	100	63.969	Pongo_abelii
ENSXMAG00000010927	vars	86	66.430	ENSPCAG00000013565	VARS	86	66.430	Procavia_capensis
ENSXMAG00000010927	vars	100	65.319	ENSPCOG00000010942	VARS	100	65.552	Propithecus_coquereli
ENSXMAG00000010927	vars	100	63.015	ENSPVAG00000012403	VARS	100	63.268	Pteropus_vampyrus
ENSXMAG00000010927	vars	100	91.301	ENSPNYG00000022511	vars	100	91.301	Pundamilia_nyererei
ENSXMAG00000010927	vars	100	83.685	ENSPNAG00000020962	vars	100	84.100	Pygocentrus_nattereri
ENSXMAG00000010927	vars	100	65.370	ENSRNOG00000000867	Vars	100	65.214	Rattus_norvegicus
ENSXMAG00000010927	vars	100	65.423	ENSRBIG00000041669	VARS	100	65.447	Rhinopithecus_bieti
ENSXMAG00000010927	vars	100	65.423	ENSRROG00000045490	VARS	100	65.447	Rhinopithecus_roxellana
ENSXMAG00000010927	vars	100	65.058	ENSSBOG00000035402	VARS	100	65.058	Saimiri_boliviensis_boliviensis
ENSXMAG00000010927	vars	100	64.792	ENSSHAG00000006937	VARS	100	64.823	Sarcophilus_harrisii
ENSXMAG00000010927	vars	100	80.233	ENSSFOG00015014272	vars	100	80.233	Scleropages_formosus
ENSXMAG00000010927	vars	100	88.263	ENSSMAG00000009596	vars	99	88.341	Scophthalmus_maximus
ENSXMAG00000010927	vars	100	90.532	ENSSDUG00000014177	vars	100	90.767	Seriola_dumerili
ENSXMAG00000010927	vars	100	90.219	ENSSLDG00000025316	vars	100	90.454	Seriola_lalandi_dorsalis
ENSXMAG00000010927	vars	100	89.953	ENSSPAG00000017068	vars	100	90.110	Stegastes_partitus
ENSXMAG00000010927	vars	100	65.241	ENSSSCG00000038950	VARS	100	65.474	Sus_scrofa
ENSXMAG00000010927	vars	82	81.166	ENSTRUG00000012307	vars	98	81.011	Takifugu_rubripes
ENSXMAG00000010927	vars	100	85.815	ENSTNIG00000008011	vars	100	85.815	Tetraodon_nigroviridis
ENSXMAG00000010927	vars	100	59.891	ENSTTRG00000014128	VARS	100	59.891	Tursiops_truncatus
ENSXMAG00000010927	vars	100	63.919	ENSUAMG00000010424	VARS	100	64.047	Ursus_americanus
ENSXMAG00000010927	vars	100	60.405	ENSUMAG00000013486	VARS	100	60.561	Ursus_maritimus
ENSXMAG00000010927	vars	100	65.579	ENSVVUG00000021323	VARS	100	65.319	Vulpes_vulpes
ENSXMAG00000010927	vars	100	64.374	ENSXETG00000024076	vars	100	64.099	Xenopus_tropicalis
ENSXMAG00000010927	vars	100	96.075	ENSXCOG00000019172	vars	100	96.075	Xiphophorus_couchianus