EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000010979 (Gene tree)
Gene ID: 102228989
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 5753 bases
Position: chr17:4419549-4425301
Accession: 102228989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000011007	zf-C3HC	PF07967.13	1.1e-33	1	1
ENSXMAP00000011007	Rsm1	PF08600.10	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011021	-	3611	XM_014471351	ENSXMAP00000011007	462 (aa)	XP_014326837	M4A963

Gene Model

Click here to download ENSXMAG00000010979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000010979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000010979	zc3hc1	94	44.079	ENSG00000091732	ZC3HC1	91	44.714	Homo_sapiens
ENSXMAG00000010979	zc3hc1	98	78.947	ENSAPOG00000009078	zc3hc1	91	78.947	Acanthochromis_polyacanthus
ENSXMAG00000010979	zc3hc1	95	44.201	ENSAMEG00000005425	ZC3HC1	86	44.889	Ailuropoda_melanoleuca
ENSXMAG00000010979	zc3hc1	97	76.923	ENSACIG00000019513	zc3hc1	91	76.923	Amphilophus_citrinellus
ENSXMAG00000010979	zc3hc1	98	77.143	ENSAOCG00000024310	zc3hc1	91	78.070	Amphiprion_ocellaris
ENSXMAG00000010979	zc3hc1	98	77.143	ENSAPEG00000004907	zc3hc1	91	78.070	Amphiprion_percula
ENSXMAG00000010979	zc3hc1	95	75.792	ENSATEG00000016898	zc3hc1	91	75.792	Anabas_testudineus
ENSXMAG00000010979	zc3hc1	93	42.921	ENSAPLG00000003832	ZC3HC1	96	42.921	Anas_platyrhynchos
ENSXMAG00000010979	zc3hc1	95	43.764	ENSACAG00000001638	ZC3HC1	87	43.764	Anolis_carolinensis
ENSXMAG00000010979	zc3hc1	95	42.637	ENSANAG00000022213	ZC3HC1	86	43.304	Aotus_nancymaae
ENSXMAG00000010979	zc3hc1	97	77.925	ENSACLG00000025033	zc3hc1	98	77.925	Astatotilapia_calliptera
ENSXMAG00000010979	zc3hc1	92	51.869	ENSAMXG00000036792	zc3hc1	87	51.869	Astyanax_mexicanus
ENSXMAG00000010979	zc3hc1	95	45.553	ENSBTAG00000011247	ZC3HC1	87	46.256	Bos_taurus
ENSXMAG00000010979	zc3hc1	96	43.469	ENSCJAG00000010536	ZC3HC1	88	44.130	Callithrix_jacchus
ENSXMAG00000010979	zc3hc1	95	44.902	ENSCAFG00000029401	-	86	45.154	Canis_familiaris
ENSXMAG00000010979	zc3hc1	95	44.902	ENSCAFG00000028735	-	88	45.098	Canis_familiaris
ENSXMAG00000010979	zc3hc1	95	44.828	ENSCAFG00000001499	-	87	45.022	Canis_familiaris
ENSXMAG00000010979	zc3hc1	95	45.119	ENSCAFG00000031850	-	88	45.316	Canis_familiaris
ENSXMAG00000010979	zc3hc1	95	44.276	ENSCAFG00020023333	-	88	44.469	Canis_lupus_dingo
ENSXMAG00000010979	zc3hc1	95	44.902	ENSCAFG00020006829	-	88	45.098	Canis_lupus_dingo
ENSXMAG00000010979	zc3hc1	95	40.909	ENSCHIG00000014103	ZC3HC1	87	41.538	Capra_hircus
ENSXMAG00000010979	zc3hc1	94	42.984	ENSTSYG00000002843	ZC3HC1	86	43.624	Carlito_syrichta
ENSXMAG00000010979	zc3hc1	95	36.044	ENSCAPG00000016300	ZC3HC1	95	37.624	Cavia_aperea
ENSXMAG00000010979	zc3hc1	95	44.469	ENSCPOG00000014034	ZC3HC1	85	49.648	Cavia_porcellus
ENSXMAG00000010979	zc3hc1	94	32.517	ENSCCAG00000020384	ZC3HC1	98	37.131	Cebus_capucinus
ENSXMAG00000010979	zc3hc1	95	43.601	ENSCATG00000023130	ZC3HC1	95	43.478	Cercocebus_atys
ENSXMAG00000010979	zc3hc1	89	34.118	ENSCLAG00000008260	ZC3HC1	88	35.059	Chinchilla_lanigera
ENSXMAG00000010979	zc3hc1	79	39.426	ENSCSAG00000009881	ZC3HC1	97	40.157	Chlorocebus_sabaeus
ENSXMAG00000010979	zc3hc1	96	44.516	ENSCHOG00000011846	ZC3HC1	99	44.924	Choloepus_hoffmanni
ENSXMAG00000010979	zc3hc1	94	45.556	ENSCPBG00000017519	ZC3HC1	87	45.333	Chrysemys_picta_bellii
ENSXMAG00000010979	zc3hc1	95	43.818	ENSCANG00000029091	ZC3HC1	88	44.444	Colobus_angolensis_palliatus
ENSXMAG00000010979	zc3hc1	95	45.133	ENSCGRG00001018805	Zc3hc1	85	48.443	Cricetulus_griseus_chok1gshd
ENSXMAG00000010979	zc3hc1	95	44.469	ENSCGRG00000017114	Zc3hc1	87	44.469	Cricetulus_griseus_crigri
ENSXMAG00000010979	zc3hc1	97	69.147	ENSCSEG00000009284	zc3hc1	89	69.147	Cynoglossus_semilaevis
ENSXMAG00000010979	zc3hc1	98	84.735	ENSCVAG00000011566	zc3hc1	91	84.735	Cyprinodon_variegatus
ENSXMAG00000010979	zc3hc1	98	57.296	ENSDARG00000062651	zc3hc1	92	57.296	Danio_rerio
ENSXMAG00000010979	zc3hc1	95	44.812	ENSDNOG00000045016	ZC3HC1	87	45.033	Dasypus_novemcinctus
ENSXMAG00000010979	zc3hc1	91	44.266	ENSDORG00000008697	Zc3hc1	90	44.240	Dipodomys_ordii
ENSXMAG00000010979	zc3hc1	95	45.119	ENSEASG00005008789	ZC3HC1	95	45.969	Equus_asinus_asinus
ENSXMAG00000010979	zc3hc1	95	44.902	ENSECAG00000017886	ZC3HC1	88	45.534	Equus_caballus
ENSXMAG00000010979	zc3hc1	69	47.647	ENSEEUG00000003123	ZC3HC1	65	47.647	Erinaceus_europaeus
ENSXMAG00000010979	zc3hc1	98	57.511	ENSELUG00000023168	zc3hc1	92	59.101	Esox_lucius
ENSXMAG00000010979	zc3hc1	98	42.526	ENSFCAG00000010429	ZC3HC1	97	43.129	Felis_catus
ENSXMAG00000010979	zc3hc1	94	41.886	ENSFALG00000005006	ZC3HC1	95	41.886	Ficedula_albicollis
ENSXMAG00000010979	zc3hc1	95	44.060	ENSFDAG00000019897	ZC3HC1	87	48.052	Fukomys_damarensis
ENSXMAG00000010979	zc3hc1	98	87.168	ENSFHEG00000020149	zc3hc1	91	87.168	Fundulus_heteroclitus
ENSXMAG00000010979	zc3hc1	94	63.594	ENSGMOG00000002914	zc3hc1	89	63.594	Gadus_morhua
ENSXMAG00000010979	zc3hc1	92	41.778	ENSGALG00000008003	ZC3HC1	86	42.000	Gallus_gallus
ENSXMAG00000010979	zc3hc1	98	97.124	ENSGAFG00000016095	zc3hc1	91	97.124	Gambusia_affinis
ENSXMAG00000010979	zc3hc1	98	71.744	ENSGACG00000019706	zc3hc1	91	71.744	Gasterosteus_aculeatus
ENSXMAG00000010979	zc3hc1	84	42.506	ENSGAGG00000016106	ZC3HC1	100	44.226	Gopherus_agassizii
ENSXMAG00000010979	zc3hc1	94	44.079	ENSGGOG00000015504	ZC3HC1	91	44.714	Gorilla_gorilla
ENSXMAG00000010979	zc3hc1	97	77.925	ENSHBUG00000008347	zc3hc1	91	77.925	Haplochromis_burtoni
ENSXMAG00000010979	zc3hc1	95	44.035	ENSHGLG00000005085	ZC3HC1	88	44.934	Heterocephalus_glaber_female
ENSXMAG00000010979	zc3hc1	94	44.176	ENSHGLG00100011395	ZC3HC1	87	45.033	Heterocephalus_glaber_male
ENSXMAG00000010979	zc3hc1	97	65.556	ENSHCOG00000014309	zc3hc1	90	65.639	Hippocampus_comes
ENSXMAG00000010979	zc3hc1	95	43.833	ENSSTOG00000023599	-	86	44.519	Ictidomys_tridecemlineatus
ENSXMAG00000010979	zc3hc1	97	77.405	ENSKMAG00000015315	zc3hc1	84	77.405	Kryptolebias_marmoratus
ENSXMAG00000010979	zc3hc1	99	66.882	ENSLBEG00000017325	zc3hc1	98	66.882	Labrus_bergylta
ENSXMAG00000010979	zc3hc1	68	46.988	ENSLACG00000013032	ZC3HC1	76	46.988	Latimeria_chalumnae
ENSXMAG00000010979	zc3hc1	95	53.965	ENSLOCG00000015963	zc3hc1	89	53.965	Lepisosteus_oculatus
ENSXMAG00000010979	zc3hc1	98	43.158	ENSLAFG00000001292	ZC3HC1	90	43.763	Loxodonta_africana
ENSXMAG00000010979	zc3hc1	95	43.818	ENSMFAG00000030176	ZC3HC1	95	43.696	Macaca_fascicularis
ENSXMAG00000010979	zc3hc1	95	43.074	ENSMMUG00000006155	ZC3HC1	95	43.696	Macaca_mulatta
ENSXMAG00000010979	zc3hc1	95	43.818	ENSMNEG00000011833	ZC3HC1	95	43.696	Macaca_nemestrina
ENSXMAG00000010979	zc3hc1	95	43.818	ENSMLEG00000027328	ZC3HC1	95	43.696	Mandrillus_leucophaeus
ENSXMAG00000010979	zc3hc1	97	76.872	ENSMAMG00000010691	zc3hc1	91	76.872	Mastacembelus_armatus
ENSXMAG00000010979	zc3hc1	97	77.925	ENSMZEG00005007142	zc3hc1	91	77.925	Maylandia_zebra
ENSXMAG00000010979	zc3hc1	92	40.351	ENSMGAG00000002977	ZC3HC1	86	41.907	Meleagris_gallopavo
ENSXMAG00000010979	zc3hc1	89	40.610	ENSMAUG00000017032	Zc3hc1	92	41.080	Mesocricetus_auratus
ENSXMAG00000010979	zc3hc1	95	43.133	ENSMICG00000009167	ZC3HC1	87	46.429	Microcebus_murinus
ENSXMAG00000010979	zc3hc1	95	45.033	ENSMOCG00000015239	Zc3hc1	85	48.966	Microtus_ochrogaster
ENSXMAG00000010979	zc3hc1	94	73.923	ENSMMOG00000002204	zc3hc1	99	73.923	Mola_mola
ENSXMAG00000010979	zc3hc1	95	33.833	ENSMODG00000014630	ZC3HC1	86	34.615	Monodelphis_domestica
ENSXMAG00000010979	zc3hc1	95	73.708	ENSMALG00000014447	zc3hc1	91	74.009	Monopterus_albus
ENSXMAG00000010979	zc3hc1	95	44.371	MGP_CAROLIEiJ_G0028183	Zc3hc1	87	44.789	Mus_caroli
ENSXMAG00000010979	zc3hc1	95	43.764	ENSMUSG00000039130	Zc3hc1	87	44.176	Mus_musculus
ENSXMAG00000010979	zc3hc1	97	40.803	MGP_PahariEiJ_G0021941	Zc3hc1	89	40.987	Mus_pahari
ENSXMAG00000010979	zc3hc1	95	43.750	MGP_SPRETEiJ_G0029183	Zc3hc1	88	44.156	Mus_spretus
ENSXMAG00000010979	zc3hc1	89	44.316	ENSMPUG00000005297	ZC3HC1	82	44.988	Mustela_putorius_furo
ENSXMAG00000010979	zc3hc1	72	38.136	ENSMLUG00000029228	-	98	38.068	Myotis_lucifugus
ENSXMAG00000010979	zc3hc1	95	45.316	ENSMLUG00000000063	-	86	45.354	Myotis_lucifugus
ENSXMAG00000010979	zc3hc1	95	44.685	ENSNGAG00000019014	Zc3hc1	88	44.880	Nannospalax_galili
ENSXMAG00000010979	zc3hc1	97	77.925	ENSNBRG00000004577	zc3hc1	91	77.925	Neolamprologus_brichardi
ENSXMAG00000010979	zc3hc1	94	43.875	ENSNLEG00000012698	ZC3HC1	96	40.214	Nomascus_leucogenys
ENSXMAG00000010979	zc3hc1	95	43.736	ENSMEUG00000011023	ZC3HC1	87	43.709	Notamacropus_eugenii
ENSXMAG00000010979	zc3hc1	95	42.048	ENSODEG00000014604	ZC3HC1	83	47.857	Octodon_degus
ENSXMAG00000010979	zc3hc1	97	77.263	ENSONIG00000011644	zc3hc1	91	77.263	Oreochromis_niloticus
ENSXMAG00000010979	zc3hc1	95	38.710	ENSOANG00000011460	ZC3HC1	97	39.093	Ornithorhynchus_anatinus
ENSXMAG00000010979	zc3hc1	98	43.158	ENSOCUG00000017137	ZC3HC1	90	43.763	Oryctolagus_cuniculus
ENSXMAG00000010979	zc3hc1	97	72.036	ENSORLG00000014409	zc3hc1	90	72.284	Oryzias_latipes
ENSXMAG00000010979	zc3hc1	97	72.483	ENSORLG00020015874	zc3hc1	90	72.727	Oryzias_latipes_hni
ENSXMAG00000010979	zc3hc1	97	72.260	ENSORLG00015014641	zc3hc1	90	72.506	Oryzias_latipes_hsok
ENSXMAG00000010979	zc3hc1	97	72.483	ENSOMEG00000020604	zc3hc1	90	72.727	Oryzias_melastigma
ENSXMAG00000010979	zc3hc1	97	72.707	ENSOMEG00000000215	zc3hc1	90	72.949	Oryzias_melastigma
ENSXMAG00000010979	zc3hc1	95	38.395	ENSOGAG00000026193	ZC3HC1	88	39.869	Otolemur_garnettii
ENSXMAG00000010979	zc3hc1	95	44.828	ENSOARG00000004907	ZC3HC1	86	45.514	Ovis_aries
ENSXMAG00000010979	zc3hc1	94	44.079	ENSPPAG00000043172	ZC3HC1	95	43.220	Pan_paniscus
ENSXMAG00000010979	zc3hc1	97	42.128	ENSPPRG00000001004	ZC3HC1	96	42.735	Panthera_pardus
ENSXMAG00000010979	zc3hc1	98	42.526	ENSPTIG00000007823	ZC3HC1	97	43.129	Panthera_tigris_altaica
ENSXMAG00000010979	zc3hc1	94	44.098	ENSPTRG00000019685	ZC3HC1	90	44.743	Pan_troglodytes
ENSXMAG00000010979	zc3hc1	95	43.074	ENSPANG00000014229	ZC3HC1	95	43.696	Papio_anubis
ENSXMAG00000010979	zc3hc1	97	52.391	ENSPKIG00000007172	zc3hc1	90	52.391	Paramormyrops_kingsleyae
ENSXMAG00000010979	zc3hc1	94	39.911	ENSPSIG00000016646	ZC3HC1	87	41.739	Pelodiscus_sinensis
ENSXMAG00000010979	zc3hc1	93	64.760	ENSPMGG00000003548	zc3hc1	94	57.303	Periophthalmus_magnuspinnatus
ENSXMAG00000010979	zc3hc1	95	43.326	ENSPEMG00000000514	Zc3hc1	88	44.444	Peromyscus_maniculatus_bairdii
ENSXMAG00000010979	zc3hc1	96	40.870	ENSPCIG00000020619	ZC3HC1	100	41.849	Phascolarctos_cinereus
ENSXMAG00000010979	zc3hc1	99	93.696	ENSPFOG00000003466	zc3hc1	93	93.696	Poecilia_formosa
ENSXMAG00000010979	zc3hc1	98	94.912	ENSPLAG00000022211	zc3hc1	91	94.912	Poecilia_latipinna
ENSXMAG00000010979	zc3hc1	98	94.912	ENSPMEG00000001458	zc3hc1	95	91.781	Poecilia_mexicana
ENSXMAG00000010979	zc3hc1	98	95.354	ENSPREG00000004004	zc3hc1	91	95.354	Poecilia_reticulata
ENSXMAG00000010979	zc3hc1	94	41.048	ENSPPYG00000017998	ZC3HC1	87	41.667	Pongo_abelii
ENSXMAG00000010979	zc3hc1	95	43.833	ENSPCAG00000001182	ZC3HC1	95	44.469	Procavia_capensis
ENSXMAG00000010979	zc3hc1	95	44.252	ENSPCOG00000017354	ZC3HC1	97	39.158	Propithecus_coquereli
ENSXMAG00000010979	zc3hc1	94	41.907	ENSPVAG00000003195	ZC3HC1	87	42.129	Pteropus_vampyrus
ENSXMAG00000010979	zc3hc1	97	77.925	ENSPNYG00000020692	zc3hc1	91	77.925	Pundamilia_nyererei
ENSXMAG00000010979	zc3hc1	93	51.732	ENSPNAG00000020746	zc3hc1	88	51.732	Pygocentrus_nattereri
ENSXMAG00000010979	zc3hc1	95	42.366	ENSRNOG00000010154	Zc3hc1	88	42.581	Rattus_norvegicus
ENSXMAG00000010979	zc3hc1	95	43.818	ENSRBIG00000029409	ZC3HC1	98	46.753	Rhinopithecus_bieti
ENSXMAG00000010979	zc3hc1	95	43.818	ENSRROG00000041831	ZC3HC1	94	43.696	Rhinopithecus_roxellana
ENSXMAG00000010979	zc3hc1	80	66.197	ENSSBOG00000032787	ZC3HC1	84	66.197	Saimiri_boliviensis_boliviensis
ENSXMAG00000010979	zc3hc1	95	43.326	ENSSHAG00000002529	ZC3HC1	94	43.326	Sarcophilus_harrisii
ENSXMAG00000010979	zc3hc1	95	53.778	ENSSFOG00015003667	zc3hc1	84	53.778	Scleropages_formosus
ENSXMAG00000010979	zc3hc1	98	76.264	ENSSMAG00000000647	zc3hc1	82	76.703	Scophthalmus_maximus
ENSXMAG00000010979	zc3hc1	98	77.704	ENSSDUG00000004241	zc3hc1	89	77.704	Seriola_dumerili
ENSXMAG00000010979	zc3hc1	98	78.587	ENSSLDG00000025056	zc3hc1	89	78.587	Seriola_lalandi_dorsalis
ENSXMAG00000010979	zc3hc1	95	40.220	ENSSARG00000012013	ZC3HC1	87	40.839	Sorex_araneus
ENSXMAG00000010979	zc3hc1	89	38.785	ENSSPUG00000000778	ZC3HC1	82	38.967	Sphenodon_punctatus
ENSXMAG00000010979	zc3hc1	97	81.416	ENSSPAG00000020041	zc3hc1	90	81.416	Stegastes_partitus
ENSXMAG00000010979	zc3hc1	95	44.009	ENSSSCG00000016565	ZC3HC1	100	42.822	Sus_scrofa
ENSXMAG00000010979	zc3hc1	53	35.039	ENSTGUG00000016262	ZC3HC1	99	35.573	Taeniopygia_guttata
ENSXMAG00000010979	zc3hc1	97	67.108	ENSTRUG00000020077	zc3hc1	91	67.108	Takifugu_rubripes
ENSXMAG00000010979	zc3hc1	97	66.302	ENSTNIG00000007585	zc3hc1	94	65.708	Tetraodon_nigroviridis
ENSXMAG00000010979	zc3hc1	94	36.748	ENSTBEG00000005216	ZC3HC1	86	37.360	Tupaia_belangeri
ENSXMAG00000010979	zc3hc1	95	44.615	ENSTTRG00000008458	ZC3HC1	91	45.475	Tursiops_truncatus
ENSXMAG00000010979	zc3hc1	95	44.396	ENSUAMG00000020249	ZC3HC1	87	45.033	Ursus_americanus
ENSXMAG00000010979	zc3hc1	95	44.396	ENSUMAG00000009268	ZC3HC1	87	45.033	Ursus_maritimus
ENSXMAG00000010979	zc3hc1	60	43.860	ENSVPAG00000010846	ZC3HC1	54	44.912	Vicugna_pacos
ENSXMAG00000010979	zc3hc1	89	45.244	ENSVVUG00000012386	ZC3HC1	86	45.455	Vulpes_vulpes
ENSXMAG00000010979	zc3hc1	88	39.394	ENSXETG00000033900	zc3hc1	85	39.394	Xenopus_tropicalis
ENSXMAG00000010979	zc3hc1	98	96.239	ENSXCOG00000013570	zc3hc1	91	96.239	Xiphophorus_couchianus